RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 NEXN-AS1Q8NBZ9 246 aa12.51□□□□□ -0.41
PSEN1-208ENST00000553719 ICOSQ9Y6W8 199 aa12.51□□□□□ -0.41
PSEN1-208ENST00000553719 GAS8-AS1O95177 125 aa12.5□□□□□ -0.41
PSEN1-208ENST00000553719 S100A1P23297 94 aa12.5□□□□□ -0.41
PSEN1-208ENST00000553719 MRPL51Q4U2R6 128 aaKnown RBP12.5□□□□□ -0.41
PSEN1-208ENST00000553719 SMCO4Q9NRQ5 59 aa12.5□□□□□ -0.41
PSEN1-208ENST00000553719 DNAH6Q9C0G6 4158 aa12.49□□□□□ -0.41
PSEN1-208ENST00000553719 KMT2CQ8NEZ4 4911 aaKnown RBP12.49□□□□□ -0.41
PSEN1-208ENST00000553719 H7C1H1 209 aa12.49□□□□□ -0.41
PSEN1-208ENST00000553719 NUDT3O95989 172 aa12.49□□□□□ -0.41
PSEN1-208ENST00000553719 MRPL23Q16540 153 aaKnown RBP12.49□□□□□ -0.41
PSEN1-208ENST00000553719 MRAP2Q96G30 205 aa12.49□□□□□ -0.41
PSEN1-208ENST00000553719 UBE2D3P61077 147 aa12.48□□□□□ -0.41
PSEN1-208ENST00000553719 UBE2D2P62837 147 aa12.48□□□□□ -0.41
PSEN1-208ENST00000553719 TRBV7-3A0A075B6L6 115 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 SRIP30626 198 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 RPS10P46783 165 aaKnown RBP12.47□□□□□ -0.41
PSEN1-208ENST00000553719 GAGE1Q13065 139 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 GAGE4Q13068 117 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 GAGE5Q13069 117 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 COX19Q49B96 90 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 GAGE13Q4V321 117 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 RPL39LQ96EH5 51 aaKnown RBP12.47□□□□□ -0.41
PSEN1-208ENST00000553719 DNAJC30Q96LL9 226 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 GNB1LQ9BYB4 327 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 NIT2Q9NQR4 276 aa12.47□□□□□ -0.41
PSEN1-208ENST00000553719 TRBV6-5A0A0K0K1A5 114 aa12.46□□□□□ -0.41
PSEN1-208ENST00000553719 SCO1O75880 301 aa12.46□□□□□ -0.41
PSEN1-208ENST00000553719 NCR2O95944 276 aa12.46□□□□□ -0.41
PSEN1-208ENST00000553719 RPL36AP83881 106 aaKnown RBP12.46□□□□□ -0.41
PSEN1-208ENST00000553719 NRACQ8N912 160 aa12.46□□□□□ -0.41
PSEN1-208ENST00000553719 ZNRF2Q8NHG8 242 aa12.46□□□□□ -0.41
PSEN1-208ENST00000553719 RPL36ALQ969Q0 106 aaKnown RBP12.46□□□□□ -0.41
PSEN1-208ENST00000553719 SMKR1H3BMG3 65 aa12.45□□□□□ -0.42
PSEN1-208ENST00000553719 HLA-DQA1P01909 254 aa12.45□□□□□ -0.42
PSEN1-208ENST00000553719 NEGR1Q7Z3B1 354 aa12.45□□□□□ -0.42
PSEN1-208ENST00000553719 SH2D6Q7Z4S9 175 aa12.45□□□□□ -0.42
PSEN1-208ENST00000553719 D6R8Y8 96 aa12.44□□□□□ -0.42
PSEN1-208ENST00000553719 MT-ND6P03923 174 aa12.44□□□□□ -0.42
PSEN1-208ENST00000553719 TIRAPP58753 221 aa12.44□□□□□ -0.42
PSEN1-208ENST00000553719 ESRGQ1W209 222 aa12.44□□□□□ -0.42
PSEN1-208ENST00000553719 PPBPP02775 128 aa12.43□□□□□ -0.42
PSEN1-208ENST00000553719 ATP6V0E2Q8NHE4 81 aa12.43□□□□□ -0.42
PSEN1-208ENST00000553719 KMT2AQ03164 3969 aa12.42□□□□□ -0.42
PSEN1-208ENST00000553719 COLCA2A8K830 154 aa12.42□□□□□ -0.42
PSEN1-208ENST00000553719 CKS2P33552 79 aa12.42□□□□□ -0.42
PSEN1-208ENST00000553719 OR10J3Q5JRS4 329 aa12.42□□□□□ -0.42
PSEN1-208ENST00000553719 LYPD5Q6UWN5 251 aa12.42□□□□□ -0.42
PSEN1-208ENST00000553719 DAZ4Q86SG3 579 aaKnown RBP12.41□□□□□ -0.42
PSEN1-208ENST00000553719 ORMDL3Q8N138 153 aa12.41□□□□□ -0.42
PSEN1-208ENST00000553719 GTSF1LQ9H1H1 148 aa12.41□□□□□ -0.42
PSEN1-208ENST00000553719 DAZ3Q9NR90 486 aaKnown RBP12.41□□□□□ -0.42
PSEN1-208ENST00000553719 LINC00588Q9Y4M8 146 aa12.41□□□□□ -0.42
PSEN1-208ENST00000553719 TNFRSF18Q9Y5U5 241 aa12.41□□□□□ -0.42
PSEN1-208ENST00000553719 RYR2Q92736 4967 aa12.4□□□□□ -0.42
PSEN1-208ENST00000553719 PHOX2AO14813 284 aa12.4□□□□□ -0.42
PSEN1-208ENST00000553719 PPP1R17O96001 155 aa12.4□□□□□ -0.42
PSEN1-208ENST00000553719 NPYP01303 97 aa12.4□□□□□ -0.42
PSEN1-208ENST00000553719 APCSP02743 223 aa12.4□□□□□ -0.42
PSEN1-208ENST00000553719 POLR2KP53803 58 aaKnown RBP12.4□□□□□ -0.42
PSEN1-208ENST00000553719 LGALS9CQ6DKI2 356 aa12.4□□□□□ -0.42
PSEN1-208ENST00000553719 MRPL18Q9H0U6 180 aaKnown RBP12.4□□□□□ -0.42
PSEN1-208ENST00000553719 HYDINQ4G0P3 5121 aa12.4□□□□□ -0.42
PSEN1-208ENST00000553719 SDHAF1A6NFY7 115 aa12.39□□□□□ -0.43
PSEN1-208ENST00000553719 TNFRSF6BO95407 300 aa12.39□□□□□ -0.43
PSEN1-208ENST00000553719 LINC00476Q8WZB0 136 aa12.39□□□□□ -0.43
PSEN1-208ENST00000553719 UPK3BQ9BT76 320 aa12.39□□□□□ -0.43
PSEN1-208ENST00000553719 TMEM70Q9BUB7 260 aa12.39□□□□□ -0.43
PSEN1-208ENST00000553719 LAMTOR2Q9Y2Q5 125 aa12.39□□□□□ -0.43
PSEN1-208ENST00000553719 MRPS16Q9Y3D3 137 aaKnown RBP12.39□□□□□ -0.43
PSEN1-208ENST00000553719 IGHV3-38A0A0C4DH36 116 aa12.38□□□□□ -0.43
PSEN1-208ENST00000553719 CCL18P55774 89 aa12.38□□□□□ -0.43
PSEN1-208ENST00000553719 SUMO2P61956 95 aaKnown RBP12.38□□□□□ -0.43
PSEN1-208ENST00000553719 RPL32P62910 135 aaKnown RBP12.38□□□□□ -0.43
PSEN1-208ENST00000553719 PRELID3AQ96N28 172 aa12.38□□□□□ -0.43
PSEN1-208ENST00000553719 C20orf78Q9BR46 151 aa12.38□□□□□ -0.43
PSEN1-208ENST00000553719 ST20Q9HBF5 79 aa12.38□□□□□ -0.43
PSEN1-208ENST00000553719 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
PSEN1-208ENST00000553719 KIAA1644Q3SXP7 199 aa12.37□□□□□ -0.43
PSEN1-208ENST00000553719 NTM-AS1Q6ZSK4 140 aa12.37□□□□□ -0.43
PSEN1-208ENST00000553719 PRSS47A8MTI9 375 aa12.36□□□□□ -0.43
PSEN1-208ENST00000553719 LELP1Q5T871 98 aa12.36□□□□□ -0.43
PSEN1-208ENST00000553719 TRAPPC1Q9Y5R8 145 aa12.36□□□□□ -0.43
PSEN1-208ENST00000553719 DNAH2Q9P225 4427 aa12.36□□□□□ -0.43
PSEN1-208ENST00000553719 FABP9Q0Z7S8 132 aa12.35□□□□□ -0.43
PSEN1-208ENST00000553719 ALKBH7Q9BT30 221 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-208ENST00000553719 IGLV2-18A0A075B6J9 118 aa12.34□□□□□ -0.43
PSEN1-208ENST00000553719 TRBV6-8A0A0A6YYG3 113 aa12.34□□□□□ -0.43
PSEN1-208ENST00000553719 RAB5AP20339 215 aa12.34□□□□□ -0.43
PSEN1-208ENST00000553719 SMIM2Q9BVW6 85 aa12.34□□□□□ -0.43
PSEN1-208ENST00000553719 I3L3M4 83 aa12.33□□□□□ -0.44
PSEN1-208ENST00000553719 TSHBP01222 138 aa12.33□□□□□ -0.44
PSEN1-208ENST00000553719 IQCJQ1A5X6 159 aa12.33□□□□□ -0.44
PSEN1-208ENST00000553719 TMEM97Q5BJF2 176 aa12.33□□□□□ -0.44
PSEN1-208ENST00000553719 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-208ENST00000553719 LCE6AA0A183 80 aa12.32□□□□□ -0.44
PSEN1-208ENST00000553719 VCYO14598 125 aa12.32□□□□□ -0.44
PSEN1-208ENST00000553719 WFDC10BQ8IUB3 73 aa12.32□□□□□ -0.44
PSEN1-208ENST00000553719 UBE2DNLQ8IWF7 75 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms