RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 AQP10Q96PS8 301 aa8.97□□□□□ -0.97
NEDD1-205ENST00000553609 NDUFA13Q9P0J0 144 aa8.97□□□□□ -0.97
NEDD1-205ENST00000553609 VAX2Q9UIW0 290 aa8.97□□□□□ -0.97
NEDD1-205ENST00000553609 ZFP30Q9Y2G7 519 aa8.97□□□□□ -0.97
NEDD1-205ENST00000553609 OR10AG1Q8NH19 301 aa8.96□□□□□ -0.98
NEDD1-205ENST00000553609 LINC01600Q96MT4 127 aa8.96□□□□□ -0.98
NEDD1-205ENST00000553609 TRBV6-1A0A0K0K1D8 114 aa8.95□□□□□ -0.98
NEDD1-205ENST00000553609 PHOX2AO14813 284 aa8.95□□□□□ -0.98
NEDD1-205ENST00000553609 LTAP01374 205 aa8.95□□□□□ -0.98
NEDD1-205ENST00000553609 GAGE6Q13070 117 aa8.95□□□□□ -0.98
NEDD1-205ENST00000553609 ZNF56Q15929 161 aa8.95□□□□□ -0.98
NEDD1-205ENST00000553609 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
NEDD1-205ENST00000553609 IGLV10-54A0A075B6I4 117 aa8.94□□□□□ -0.98
NEDD1-205ENST00000553609 IGHV3-64A0A075B6Q5 118 aa8.94□□□□□ -0.98
NEDD1-205ENST00000553609 CTXND1A0A1B0GTU2 59 aa8.94□□□□□ -0.98
NEDD1-205ENST00000553609 FMC1Q96HJ9 113 aa8.94□□□□□ -0.98
NEDD1-205ENST00000553609 hDV102S1A0JD36 115 aa8.93□□□□□ -0.98
NEDD1-205ENST00000553609 IQCJQ1A5X6 159 aa8.93□□□□□ -0.98
NEDD1-205ENST00000553609 C20orf203Q8NBC4 194 aa8.93□□□□□ -0.98
NEDD1-205ENST00000553609 SSBP4Q9BWG4 385 aaPredicted RBP8.93□□□□□ -0.98
NEDD1-205ENST00000553609 NKX6-2Q9C056 277 aaPredicted RBP8.93□□□□□ -0.98
NEDD1-205ENST00000553609 KIF25-AS1Q9Y6Z4 181 aa8.93□□□□□ -0.98
NEDD1-205ENST00000553609 SNAI2O43623 268 aa8.92□□□□□ -0.98
NEDD1-205ENST00000553609 CXCL1P09341 107 aa8.92□□□□□ -0.98
NEDD1-205ENST00000553609 REG3AQ06141 175 aa8.92□□□□□ -0.98
NEDD1-205ENST00000553609 TMEM97Q5BJF2 176 aa8.92□□□□□ -0.98
NEDD1-205ENST00000553609 RPL7L1Q6DKI1 246 aaKnown RBP8.92□□□□□ -0.98
NEDD1-205ENST00000553609 DERL1Q9BUN8 251 aa8.92□□□□□ -0.98
NEDD1-205ENST00000553609 GFRA4Q9GZZ7 299 aa8.92□□□□□ -0.98
NEDD1-205ENST00000553609 UBE2G1P62253 170 aa8.91□□□□□ -0.98
NEDD1-205ENST00000553609 Q5BKY6 102 aa8.91□□□□□ -0.98
NEDD1-205ENST00000553609 LPAP08519 4548 aa8.9□□□□□ -0.98
NEDD1-205ENST00000553609 TRBV25-1A0A075B6N4 114 aa8.9□□□□□ -0.98
NEDD1-205ENST00000553609 MUC21A0A0G2JKD1 596 aa8.9□□□□□ -0.98
NEDD1-205ENST00000553609 MUC21A0A140T8X8 626 aa8.9□□□□□ -0.98
NEDD1-205ENST00000553609 KRTAP10-8P60410 259 aa8.9□□□□□ -0.98
NEDD1-205ENST00000553609 PRR3P79522 188 aaKnown RBP8.9□□□□□ -0.98
NEDD1-205ENST00000553609 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.9□□□□□ -0.98
NEDD1-205ENST00000553609 ZNF471Q9BX82 626 aaPredicted RBP8.9□□□□□ -0.98
NEDD1-205ENST00000553609 IGLV4-60A0A075B6I1 120 aa8.89□□□□□ -0.99
NEDD1-205ENST00000553609 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.89□□□□□ -0.99
NEDD1-205ENST00000553609 TRAV8-4A0A0B4J246 113 aa8.89□□□□□ -0.99
NEDD1-205ENST00000553609 A0A0J9YXV3 536 aa8.89□□□□□ -0.99
NEDD1-205ENST00000553609 P01737 135 aa8.89□□□□□ -0.99
NEDD1-205ENST00000553609 OR5AL1P0C617 328 aa8.89□□□□□ -0.99
NEDD1-205ENST00000553609 C15orf56Q8N910 161 aa8.89□□□□□ -0.99
NEDD1-205ENST00000553609 DPH3Q96FX2 82 aa8.89□□□□□ -0.99
NEDD1-205ENST00000553609 IGHV1-24A0A0C4DH33 117 aa8.88□□□□□ -0.99
NEDD1-205ENST00000553609 FHITP49789 147 aa8.88□□□□□ -0.99
NEDD1-205ENST00000553609 WDR73Q6P4I2 378 aa8.88□□□□□ -0.99
NEDD1-205ENST00000553609 C7orf33Q8WU49 177 aa8.88□□□□□ -0.99
NEDD1-205ENST00000553609 TCEAL7Q9BRU2 100 aa8.88□□□□□ -0.99
NEDD1-205ENST00000553609 MLST8Q9BVC4 326 aa8.88□□□□□ -0.99
NEDD1-205ENST00000553609 AP5S1Q9NUS5 200 aa8.88□□□□□ -0.99
NEDD1-205ENST00000553609 ALG5Q9Y673 324 aa8.88□□□□□ -0.99
NEDD1-205ENST00000553609 A0A1B0GUV1 79 aa8.87□□□□□ -0.99
NEDD1-205ENST00000553609 MAP1LC3B2A6NCE7 125 aa8.87□□□□□ -0.99
NEDD1-205ENST00000553609 F5H697 171 aa8.87□□□□□ -0.99
NEDD1-205ENST00000553609 M0QY20 66 aa8.87□□□□□ -0.99
NEDD1-205ENST00000553609 AKR1C3P42330 323 aa8.87□□□□□ -0.99
NEDD1-205ENST00000553609 DEFA3P59666 94 aa8.87□□□□□ -0.99
NEDD1-205ENST00000553609 COX6A2Q02221 97 aa8.87□□□□□ -0.99
NEDD1-205ENST00000553609 INO80EQ8NBZ0 244 aaPredicted RBP8.87□□□□□ -0.99
NEDD1-205ENST00000553609 MAP1LC3BQ9GZQ8 125 aa8.87□□□□□ -0.99
NEDD1-205ENST00000553609 RAB5CP51148 216 aa8.86□□□□□ -0.99
NEDD1-205ENST00000553609 SPANXN1Q5VSR9 72 aa8.86□□□□□ -0.99
NEDD1-205ENST00000553609 PRSS3P2Q8NHM4 247 aa8.86□□□□□ -0.99
NEDD1-205ENST00000553609 DPH3P1Q9H4G8 78 aa8.86□□□□□ -0.99
NEDD1-205ENST00000553609 GAS8-AS1O95177 125 aa8.85□□□□□ -0.99
NEDD1-205ENST00000553609 GZMBP10144 247 aa8.85□□□□□ -0.99
NEDD1-205ENST00000553609 AP1S3Q96PC3 154 aa8.85□□□□□ -0.99
NEDD1-205ENST00000553609 BORCS7-ASMTA0A0B4J1R7 106 aa8.84□□□□□ -0.99
NEDD1-205ENST00000553609 A6NHS1 94 aa8.84□□□□□ -0.99
NEDD1-205ENST00000553609 DEFA1P59665 94 aa8.84□□□□□ -0.99
NEDD1-205ENST00000553609 SSTP61278 116 aa8.84□□□□□ -0.99
NEDD1-205ENST00000553609 AKR1C8PQ5T2L2 129 aa8.84□□□□□ -0.99
NEDD1-205ENST00000553609 CST9LP1Q5W188 147 aa8.84□□□□□ -0.99
NEDD1-205ENST00000553609 GTSF1Q8WW33 167 aa8.84□□□□□ -0.99
NEDD1-205ENST00000553609 TMEM243Q9BU79 118 aa8.84□□□□□ -0.99
NEDD1-205ENST00000553609 IGKV2-24A0A0C4DH68 120 aa8.83□□□□□ -1
NEDD1-205ENST00000553609 NDUFS6O75380 124 aaKnown RBP8.83□□□□□ -1
NEDD1-205ENST00000553609 MAJINQ3KP22 176 aa8.83□□□□□ -1
NEDD1-205ENST00000553609 SUMO4Q6EEV6 95 aa8.83□□□□□ -1
NEDD1-205ENST00000553609 SCO2A0A1W2PP80 73 aa8.82□□□□□ -1
NEDD1-205ENST00000553609 PAGE4O60829 102 aa8.82□□□□□ -1
NEDD1-205ENST00000553609 SMIM17P0DL12 118 aa8.82□□□□□ -1
NEDD1-205ENST00000553609 RPS10P46783 165 aaKnown RBP8.82□□□□□ -1
NEDD1-205ENST00000553609 NKX2-5P52952 324 aaPredicted RBP8.82□□□□□ -1
NEDD1-205ENST00000553609 SRSF9Q13242 221 aaKnown RBP eCLIP8.82□□□□□ -1
NEDD1-205ENST00000553609 STPG4Q8N801 248 aa8.82□□□□□ -1
NEDD1-205ENST00000553609 STOML3Q8TAV4 291 aa8.82□□□□□ -1
NEDD1-205ENST00000553609 PGLYRP4Q96LB8 373 aa8.82□□□□□ -1
NEDD1-205ENST00000553609 A0A096LNI7 61 aa8.81□□□□□ -1
NEDD1-205ENST00000553609 GAGE12HA6NDE8 117 aa8.81□□□□□ -1
NEDD1-205ENST00000553609 S100A9P06702 114 aaKnown RBP8.81□□□□□ -1
NEDD1-205ENST00000553609 GIPP09681 153 aaPredicted RBP8.81□□□□□ -1
NEDD1-205ENST00000553609 IGLC6P0CF74 106 aa8.81□□□□□ -1
NEDD1-205ENST00000553609 HIGD2BQ4VC39 106 aa8.81□□□□□ -1
NEDD1-205ENST00000553609 SPINK6Q6UWN8 80 aa8.81□□□□□ -1
NEDD1-205ENST00000553609 BAGE2Q86Y30 109 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms