RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 EPPK1P58107 5090 aaKnown RBP15.48■□□□□ 0.07
TDP1-206ENST00000553569 A0A087WWC5 75 aa15.48■□□□□ 0.07
TDP1-206ENST00000553569 M0QY20 66 aa15.48■□□□□ 0.07
TDP1-206ENST00000553569 IGHV3-30P01768 117 aa15.48■□□□□ 0.07
TDP1-206ENST00000553569 IGHV3-33P01772 117 aa15.48■□□□□ 0.07
TDP1-206ENST00000553569 IGHV3-30-3P0DP02 117 aa15.48■□□□□ 0.07
TDP1-206ENST00000553569 IGHV3-30-5P0DP03 117 aa15.48■□□□□ 0.07
TDP1-206ENST00000553569 LINC01556Q5JQF7 62 aa15.48■□□□□ 0.07
TDP1-206ENST00000553569 A0A1B0GUT8 65 aa15.47■□□□□ 0.07
TDP1-206ENST00000553569 FAM231BA6NCW3 169 aa15.47■□□□□ 0.07
TDP1-206ENST00000553569 TNFRSF18Q9Y5U5 241 aa15.46■□□□□ 0.07
TDP1-206ENST00000553569 TNP2Q05952 138 aa15.45■□□□□ 0.06
TDP1-206ENST00000553569 RASL11AQ6T310 242 aa15.45■□□□□ 0.06
TDP1-206ENST00000553569 Q8N3U1 123 aa15.45■□□□□ 0.06
TDP1-206ENST00000553569 C10orf126Q8N4M7 172 aa15.45■□□□□ 0.06
TDP1-206ENST00000553569 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.45■□□□□ 0.06
TDP1-206ENST00000553569 NUP35Q8NFH5 326 aa15.45■□□□□ 0.06
TDP1-206ENST00000553569 TRAV26-2A0A0B4J265 109 aa15.44■□□□□ 0.06
TDP1-206ENST00000553569 DNAJC30Q96LL9 226 aa15.44■□□□□ 0.06
TDP1-206ENST00000553569 NAT8BQ9UHF3 227 aa15.44■□□□□ 0.06
TDP1-206ENST00000553569 K7EP13 123 aa15.43■□□□□ 0.06
TDP1-206ENST00000553569 BTF3P20290 206 aaKnown RBP15.43■□□□□ 0.06
TDP1-206ENST00000553569 A0A1B0GVY2 172 aa15.42■□□□□ 0.06
TDP1-206ENST00000553569 RIGQ13278 110 aa15.42■□□□□ 0.06
TDP1-206ENST00000553569 DAZ4Q86SG3 579 aaKnown RBP15.42■□□□□ 0.06
TDP1-206ENST00000553569 GATD1Q8NB37 220 aa15.42■□□□□ 0.06
TDP1-206ENST00000553569 DAZ3Q9NR90 486 aaKnown RBP15.42■□□□□ 0.06
TDP1-206ENST00000553569 TRBV6-8A0A0A6YYG3 113 aa15.41■□□□□ 0.06
TDP1-206ENST00000553569 SMIM27A0A1W2PRY6 76 aa15.41■□□□□ 0.06
TDP1-206ENST00000553569 NIT2Q9NQR4 276 aa15.41■□□□□ 0.06
TDP1-206ENST00000553569 FAT2Q9NYQ8 4349 aa15.41■□□□□ 0.06
TDP1-206ENST00000553569 DNAH17Q9UFH2 4485 aa15.41■□□□□ 0.06
TDP1-206ENST00000553569 PNRC1Q12796 327 aaPredicted RBP15.4■□□□□ 0.06
TDP1-206ENST00000553569 UQCC3Q6UW78 93 aa15.4■□□□□ 0.06
TDP1-206ENST00000553569 COMMD7Q86VX2 200 aa15.4■□□□□ 0.06
TDP1-206ENST00000553569 URGCP-MRPS24S4R325 110 aa15.4■□□□□ 0.06
TDP1-206ENST00000553569 Q6ZRN7 208 aaPredicted RBP15.39■□□□□ 0.05
TDP1-206ENST00000553569 NFE4Q86UQ8 179 aa15.39■□□□□ 0.05
TDP1-206ENST00000553569 NIT1Q86X76 327 aa15.39■□□□□ 0.05
TDP1-206ENST00000553569 TMEM191AQ9H0A3 160 aa15.39■□□□□ 0.05
TDP1-206ENST00000553569 RPL39LQ96EH5 51 aaKnown RBP15.38■□□□□ 0.05
TDP1-206ENST00000553569 Q9HAA7 133 aa15.38■□□□□ 0.05
TDP1-206ENST00000553569 IBA57-AS1B1ANH7 110 aa15.37■□□□□ 0.05
TDP1-206ENST00000553569 TMEM97Q5BJF2 176 aa15.37■□□□□ 0.05
TDP1-206ENST00000553569 NTM-AS1Q6ZSK4 140 aa15.37■□□□□ 0.05
TDP1-206ENST00000553569 CHCHD5Q9BSY4 110 aa15.37■□□□□ 0.05
TDP1-206ENST00000553569 A0A087WX48 190 aa15.36■□□□□ 0.05
TDP1-206ENST00000553569 PPP1R2P9O14990 202 aa15.36■□□□□ 0.05
TDP1-206ENST00000553569 ADCYAP1P18509 176 aa15.36■□□□□ 0.05
TDP1-206ENST00000553569 KCNIP4Q6PIL6 250 aa15.36■□□□□ 0.05
TDP1-206ENST00000553569 AMN1Q8IY45 258 aa15.36■□□□□ 0.05
TDP1-206ENST00000553569 DEFB104AQ8WTQ1 72 aa15.36■□□□□ 0.05
TDP1-206ENST00000553569 TMEM218A2RU14 115 aa15.35■□□□□ 0.05
TDP1-206ENST00000553569 TMEM262E9PQX1 116 aa15.35■□□□□ 0.05
TDP1-206ENST00000553569 RNF185Q96GF1 192 aa15.35■□□□□ 0.05
TDP1-206ENST00000553569 TRBV25-1A0A075B6N4 114 aa15.34■□□□□ 0.05
TDP1-206ENST00000553569 F8W036 122 aa15.34■□□□□ 0.05
TDP1-206ENST00000553569 CAMPP49913 170 aa15.34■□□□□ 0.05
TDP1-206ENST00000553569 MRPL54Q6P161 138 aaKnown RBP15.34■□□□□ 0.05
TDP1-206ENST00000553569 FRZBQ92765 325 aa15.34■□□□□ 0.05
TDP1-206ENST00000553569 HECTD4Q9Y4D8 3996 aa15.34■□□□□ 0.05
TDP1-206ENST00000553569 IGHV1-24A0A0C4DH33 117 aa15.33■□□□□ 0.04
TDP1-206ENST00000553569 GAS8-AS1O95177 125 aa15.33■□□□□ 0.04
TDP1-206ENST00000553569 MT-ND4LP03901 98 aa15.33■□□□□ 0.04
TDP1-206ENST00000553569 RAB4AP20338 218 aa15.33■□□□□ 0.04
TDP1-206ENST00000553569 LAGE3Q14657 143 aa15.32■□□□□ 0.04
TDP1-206ENST00000553569 ANAPC16Q96DE5 110 aa15.32■□□□□ 0.04
TDP1-206ENST00000553569 CHCHD7Q9BUK0 85 aa15.32■□□□□ 0.04
TDP1-206ENST00000553569 GAGE6Q13070 117 aa15.31■□□□□ 0.04
TDP1-206ENST00000553569 COTL1Q14019 142 aa15.31■□□□□ 0.04
TDP1-206ENST00000553569 IQCJQ1A5X6 159 aa15.31■□□□□ 0.04
TDP1-206ENST00000553569 MPV17L2Q567V2 206 aa15.31■□□□□ 0.04
TDP1-206ENST00000553569 MRAP2Q96G30 205 aa15.31■□□□□ 0.04
TDP1-206ENST00000553569 KLK12Q9UKR0 248 aa15.31■□□□□ 0.04
TDP1-206ENST00000553569 BIRC6Q9NR09 4857 aa15.3■□□□□ 0.04
TDP1-206ENST00000553569 A0A1B0GW15 77 aa15.3■□□□□ 0.04
TDP1-206ENST00000553569 LINC00862A6NCI5 91 aa15.3■□□□□ 0.04
TDP1-206ENST00000553569 SMKR1H3BMG3 65 aa15.3■□□□□ 0.04
TDP1-206ENST00000553569 NCR2O95944 276 aa15.3■□□□□ 0.04
TDP1-206ENST00000553569 HBBP68871 147 aa15.3■□□□□ 0.04
TDP1-206ENST00000553569 SDHAF1A6NFY7 115 aa15.29■□□□□ 0.04
TDP1-206ENST00000553569 PSCAO43653 123 aa15.29■□□□□ 0.04
TDP1-206ENST00000553569 PKIAP61925 76 aa15.29■□□□□ 0.04
TDP1-206ENST00000553569 TMEM243Q9BU79 118 aa15.29■□□□□ 0.04
TDP1-206ENST00000553569 RPS10P46783 165 aaKnown RBP15.28■□□□□ 0.04
TDP1-206ENST00000553569 AMTP48728 403 aa15.28■□□□□ 0.04
TDP1-206ENST00000553569 ELOBQ15370 118 aa15.28■□□□□ 0.04
TDP1-206ENST00000553569 TRAV8-3A0A0A6YYJ7 113 aa15.27■□□□□ 0.04
TDP1-206ENST00000553569 A0A1B0GXF2 115 aa15.27■□□□□ 0.04
TDP1-206ENST00000553569 S100A8P05109 93 aa15.27■□□□□ 0.04
TDP1-206ENST00000553569 MRPL51Q4U2R6 128 aaKnown RBP15.27■□□□□ 0.04
TDP1-206ENST00000553569 FAM104BQ5XKR9 115 aa15.27■□□□□ 0.04
TDP1-206ENST00000553569 ATRAIDQ6UW56 229 aa15.27■□□□□ 0.04
TDP1-206ENST00000553569 Q8N976 141 aa15.27■□□□□ 0.04
TDP1-206ENST00000553569 UBE2WQ96B02 151 aa15.27■□□□□ 0.04
TDP1-206ENST00000553569 SEC11CQ9BY50 192 aa15.27■□□□□ 0.04
TDP1-206ENST00000553569 ST20Q9HBF5 79 aa15.27■□□□□ 0.04
TDP1-206ENST00000553569 TRBV6-5A0A0K0K1A5 114 aa15.26■□□□□ 0.03
TDP1-206ENST00000553569 ANGP03950 147 aaKnown RBP15.26■□□□□ 0.03
TDP1-206ENST00000553569 SPATA12Q7Z6I5 190 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms