RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 RIGQ13278 110 aa16.09■□□□□ 0.17
TDP1-205ENST00000553527 CLRN3Q8NCR9 226 aa16.09■□□□□ 0.17
TDP1-205ENST00000553527 CTDSP1Q9GZU7 261 aa16.09■□□□□ 0.17
TDP1-205ENST00000553527 DPH3P1Q9H4G8 78 aa16.09■□□□□ 0.17
TDP1-205ENST00000553527 TNFRSF18Q9Y5U5 241 aa16.09■□□□□ 0.17
TDP1-205ENST00000553527 KIF25-AS1Q9Y6Z4 181 aa16.09■□□□□ 0.17
TDP1-205ENST00000553527 F5H697 171 aa16.08■□□□□ 0.16
TDP1-205ENST00000553527 RAB4BP61018 213 aa16.08■□□□□ 0.16
TDP1-205ENST00000553527 RHEBQ15382 184 aa16.08■□□□□ 0.16
TDP1-205ENST00000553527 SVBPQ8N300 66 aa16.07■□□□□ 0.16
TDP1-205ENST00000553527 PKHD1P08F94 4074 aa16.06■□□□□ 0.16
TDP1-205ENST00000553527 TRAV9-2A0A087WT02 112 aa16.06■□□□□ 0.16
TDP1-205ENST00000553527 GAGE12JA6NER3 117 aa16.06■□□□□ 0.16
TDP1-205ENST00000553527 GAGE1Q13065 139 aa16.06■□□□□ 0.16
TDP1-205ENST00000553527 GAGE4Q13068 117 aa16.06■□□□□ 0.16
TDP1-205ENST00000553527 GAGE5Q13069 117 aa16.06■□□□□ 0.16
TDP1-205ENST00000553527 GAGE13Q4V321 117 aa16.06■□□□□ 0.16
TDP1-205ENST00000553527 C7orf77A4D0Y5 90 aa16.05■□□□□ 0.16
TDP1-205ENST00000553527 ATP6V0E2Q8NHE4 81 aa16.05■□□□□ 0.16
TDP1-205ENST00000553527 Q9UF83 564 aa16.05■□□□□ 0.16
TDP1-205ENST00000553527 SNAPINO95295 136 aa16.04■□□□□ 0.16
TDP1-205ENST00000553527 OR10J3Q5JRS4 329 aa16.04■□□□□ 0.16
TDP1-205ENST00000553527 MRPL54Q6P161 138 aaKnown RBP16.04■□□□□ 0.16
TDP1-205ENST00000553527 RPS10P5Q9NQ39 176 aa16.04■□□□□ 0.16
TDP1-205ENST00000553527 A0A1B0GW15 77 aa16.03■□□□□ 0.16
TDP1-205ENST00000553527 IMMP2LQ96T52 175 aa16.03■□□□□ 0.16
TDP1-205ENST00000553527 A0A087WWC5 75 aa16.02■□□□□ 0.16
TDP1-205ENST00000553527 CAMPP49913 170 aa16.02■□□□□ 0.16
TDP1-205ENST00000553527 SUMO4Q6EEV6 95 aa16.02■□□□□ 0.16
TDP1-205ENST00000553527 KCNIP4Q6PIL6 250 aa16.02■□□□□ 0.16
TDP1-205ENST00000553527 TMEM191AQ9H0A3 160 aa16.02■□□□□ 0.16
TDP1-205ENST00000553527 TRAV8-6A0A0B4J262 113 aa16.01■□□□□ 0.15
TDP1-205ENST00000553527 TRBV10-1A0A0K0K1A3 114 aa16.01■□□□□ 0.15
TDP1-205ENST00000553527 S100A8P05109 93 aa16.01■□□□□ 0.15
TDP1-205ENST00000553527 DNAH10OSP0CZ25 163 aa16.01■□□□□ 0.15
TDP1-205ENST00000553527 BTF3P20290 206 aaKnown RBP16.01■□□□□ 0.15
TDP1-205ENST00000553527 HBBP68871 147 aa16.01■□□□□ 0.15
TDP1-205ENST00000553527 ATP5L2Q7Z4Y8 100 aa16.01■□□□□ 0.15
TDP1-205ENST00000553527 GTSF1LQ9H1H1 148 aa16.01■□□□□ 0.15
TDP1-205ENST00000553527 TMEM242Q9NWH2 141 aa16.01■□□□□ 0.15
TDP1-205ENST00000553527 IGHV3-38A0A0C4DH36 116 aa16■□□□□ 0.15
TDP1-205ENST00000553527 H7C1H1 209 aa16■□□□□ 0.15
TDP1-205ENST00000553527 TIRAPP58753 221 aa16■□□□□ 0.15
TDP1-205ENST00000553527 A0A1B0GXF2 115 aa15.99■□□□□ 0.15
TDP1-205ENST00000553527 S100PP25815 95 aa15.99■□□□□ 0.15
TDP1-205ENST00000553527 BTF3L4Q96K17 158 aa15.99■□□□□ 0.15
TDP1-205ENST00000553527 C16orf90A8MZG2 172 aa15.98■□□□□ 0.15
TDP1-205ENST00000553527 RPL36AP83881 106 aaKnown RBP15.98■□□□□ 0.15
TDP1-205ENST00000553527 LELP1Q5T871 98 aa15.98■□□□□ 0.15
TDP1-205ENST00000553527 SPATA12Q7Z6I5 190 aa15.98■□□□□ 0.15
TDP1-205ENST00000553527 RPL36ALQ969Q0 106 aaKnown RBP15.98■□□□□ 0.15
TDP1-205ENST00000553527 M0QY20 66 aa15.97■□□□□ 0.15
TDP1-205ENST00000553527 IGHV3-30P01768 117 aa15.97■□□□□ 0.15
TDP1-205ENST00000553527 IGHV3-33P01772 117 aa15.97■□□□□ 0.15
TDP1-205ENST00000553527 LINC00694P0DN24 101 aa15.97■□□□□ 0.15
TDP1-205ENST00000553527 IGHV3-30-3P0DP02 117 aa15.97■□□□□ 0.15
TDP1-205ENST00000553527 IGHV3-30-5P0DP03 117 aa15.97■□□□□ 0.15
TDP1-205ENST00000553527 Q6ZRN7 208 aaPredicted RBP15.97■□□□□ 0.15
TDP1-205ENST00000553527 TRAV26-2A0A0B4J265 109 aa15.96■□□□□ 0.15
TDP1-205ENST00000553527 RASL11AQ6T310 242 aa15.96■□□□□ 0.15
TDP1-205ENST00000553527 NFE4Q86UQ8 179 aa15.96■□□□□ 0.15
TDP1-205ENST00000553527 AMN1Q8IY45 258 aa15.96■□□□□ 0.15
TDP1-205ENST00000553527 NEXN-AS1Q8NBZ9 246 aa15.96■□□□□ 0.15
TDP1-205ENST00000553527 TRBV7-3A0A075B6L6 115 aa15.95■□□□□ 0.14
TDP1-205ENST00000553527 TRAV9-1A0A075B6T8 112 aa15.95■□□□□ 0.14
TDP1-205ENST00000553527 URGCP-MRPS24S4R325 110 aa15.95■□□□□ 0.14
TDP1-205ENST00000553527 K7EP13 123 aa15.94■□□□□ 0.14
TDP1-205ENST00000553527 LINC01556Q5JQF7 62 aa15.94■□□□□ 0.14
TDP1-205ENST00000553527 C10orf126Q8N4M7 172 aa15.94■□□□□ 0.14
TDP1-205ENST00000553527 GATD1Q8NB37 220 aa15.94■□□□□ 0.14
TDP1-205ENST00000553527 RNF185Q96GF1 192 aa15.94■□□□□ 0.14
TDP1-205ENST00000553527 DNAH11Q96DT5 4516 aa15.94■□□□□ 0.14
TDP1-205ENST00000553527 DYNC1H1Q14204 4646 aaKnown RBP15.93■□□□□ 0.14
TDP1-205ENST00000553527 RAB4AP20338 218 aa15.93■□□□□ 0.14
TDP1-205ENST00000553527 FRZBQ92765 325 aa15.93■□□□□ 0.14
TDP1-205ENST00000553527 DNAJC30Q96LL9 226 aa15.93■□□□□ 0.14
TDP1-205ENST00000553527 UBE2D3P61077 147 aa15.92■□□□□ 0.14
TDP1-205ENST00000553527 UBE2D2P62837 147 aa15.92■□□□□ 0.14
TDP1-205ENST00000553527 FAM104BQ5XKR9 115 aa15.92■□□□□ 0.14
TDP1-205ENST00000553527 MRAP2Q96G30 205 aa15.92■□□□□ 0.14
TDP1-205ENST00000553527 KIAA1109Q2LD37 5005 aa15.91■□□□□ 0.14
TDP1-205ENST00000553527 KRTAP10-2P60368 255 aa15.91■□□□□ 0.14
TDP1-205ENST00000553527 Q9HAA7 133 aa15.91■□□□□ 0.14
TDP1-205ENST00000553527 NIT2Q9NQR4 276 aa15.91■□□□□ 0.14
TDP1-205ENST00000553527 ATRAIDQ6UW56 229 aa15.9■□□□□ 0.14
TDP1-205ENST00000553527 Q8N3U1 123 aa15.9■□□□□ 0.14
TDP1-205ENST00000553527 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.9■□□□□ 0.14
TDP1-205ENST00000553527 FUSP35637 526 aaKnown RBP eCLIP15.89■□□□□ 0.13
TDP1-205ENST00000553527 RPL39LQ96EH5 51 aaKnown RBP15.89■□□□□ 0.13
TDP1-205ENST00000553527 IBA57-AS1B1ANH7 110 aa15.88■□□□□ 0.13
TDP1-205ENST00000553527 EREGO14944 169 aa15.88■□□□□ 0.13
TDP1-205ENST00000553527 NCR2O95944 276 aa15.88■□□□□ 0.13
TDP1-205ENST00000553527 MRPL51Q4U2R6 128 aaKnown RBP15.88■□□□□ 0.13
TDP1-205ENST00000553527 SMKR1H3BMG3 65 aa15.87■□□□□ 0.13
TDP1-205ENST00000553527 DAZ4Q86SG3 579 aaKnown RBP15.87■□□□□ 0.13
TDP1-205ENST00000553527 DAZ3Q9NR90 486 aaKnown RBP15.87■□□□□ 0.13
TDP1-205ENST00000553527 PSCAO43653 123 aa15.86■□□□□ 0.13
TDP1-205ENST00000553527 GAS8-AS1O95177 125 aa15.85■□□□□ 0.13
TDP1-205ENST00000553527 CKS2P33552 79 aa15.85■□□□□ 0.13
TDP1-205ENST00000553527 A0A087WTM6 91 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms