RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 C9orf66Q5T8R8 295 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 LINC00173Q6ZV60 143 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 TMEM141Q96I45 108 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 DNAJC30Q96LL9 226 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 TMEM208Q9BTX3 173 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 CSTL1Q9H114 145 aa5.33□□□□□ -1.56
ATXN3-221ENST00000553498 HELZ2Q9BYK8 2649 aaKnown RBP5.33□□□□□ -1.56
ATXN3-221ENST00000553498 MAP1AP78559 2803 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-221ENST00000553498 HNRNPA3P51991 378 aaKnown RBP5.32□□□□□ -1.56
ATXN3-221ENST00000553498 RIPPLY3P57055 190 aa5.32□□□□□ -1.56
ATXN3-221ENST00000553498 ZNF56Q15929 161 aa5.32□□□□□ -1.56
ATXN3-221ENST00000553498 PAPPA-AS1Q5QFB9 102 aa5.32□□□□□ -1.56
ATXN3-221ENST00000553498 SLC25A34Q6PIV7 304 aa5.32□□□□□ -1.56
ATXN3-221ENST00000553498 Q6ZN92 141 aa5.32□□□□□ -1.56
ATXN3-221ENST00000553498 ERASQ7Z444 233 aa5.32□□□□□ -1.56
ATXN3-221ENST00000553498 C11orf72Q8NBR9 251 aa5.32□□□□□ -1.56
ATXN3-221ENST00000553498 TMEM263Q8WUH6 116 aaKnown RBP5.32□□□□□ -1.56
ATXN3-221ENST00000553498 C2orf88Q9BSF0 95 aa5.32□□□□□ -1.56
ATXN3-221ENST00000553498 CYSLTR1Q9Y271 337 aa5.32□□□□□ -1.56
ATXN3-221ENST00000553498 TEX15Q9BXT5 2789 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 A0A087WWL8 130 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 A0A087WX48 190 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 SDHAF1A6NFY7 115 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 I3L3M4 83 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 RS1O15537 224 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 DLEU1O43261 78 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 DPM2O94777 84 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 FXYD7P58549 80 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 DAZ2Q13117 558 aaKnown RBP5.31□□□□□ -1.56
ATXN3-221ENST00000553498 FAM74A4Q5TZK3 123 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 UFSP1Q6NVU6 142 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 C2orf66Q6UXQ4 117 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 GTSCR1Q86UQ5 136 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 ATOH7Q8N100 152 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 IL17DQ8TAD2 202 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 RPL39LQ96EH5 51 aaKnown RBP5.31□□□□□ -1.56
ATXN3-221ENST00000553498 C16orf74Q96GX8 76 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 SCGB3A1Q96QR1 104 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 TIMM17AQ99595 171 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 CITED1Q99966 193 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 ZFHX3Q15911 3703 aa5.31□□□□□ -1.56
ATXN3-221ENST00000553498 NBPF19A0A087WUL8 3843 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 H0Y8G0 127 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 SIVA1O15304 175 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 IGHV3-53P01767 116 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 IGKCP01834 107 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 COX8AP10176 69 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 CRYBA4P53673 196 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 KRTAP10-3P60369 221 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 CFAP126Q5VTH2 177 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 C1orf158Q8N1D5 194 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 RNASE8Q8TDE3 154 aaKnown RBP5.3□□□□□ -1.56
ATXN3-221ENST00000553498 XCL2Q9UBD3 114 aa5.3□□□□□ -1.56
ATXN3-221ENST00000553498 ZNF469Q96JG9 3925 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-221ENST00000553498 TRBV10-1A0A0K0K1A3 114 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 SMIM9A6NGZ8 99 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 F8VRH5 84 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 SPRY2O43597 315 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 HTN1P15515 57 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 NEXN-AS1Q8NBZ9 246 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 WFDC9Q8NEX5 89 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 C18orf15Q96N68 181 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 JPT2Q9H910 190 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 TNFRSF18Q9Y5U5 241 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 OTOGQ6ZRI0 2925 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 CSPG4Q6UVK1 2322 aa5.29□□□□□ -1.56
ATXN3-221ENST00000553498 FLNAP21333 2647 aaKnown RBP5.28□□□□□ -1.56
ATXN3-221ENST00000553498 GCN1Q92616 2671 aaKnown RBP5.28□□□□□ -1.56
ATXN3-221ENST00000553498 TRAV4A0A0B4J268 109 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 hDV102S1A0JD36 115 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 IGIPA6NJ69 53 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 SMAGPQ0VAQ4 97 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 RRN3P1Q2M238 152 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 MAJINQ3KP22 176 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 C12orf54Q6X4T0 127 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 CSNK1G2-AS1Q8NCQ2 148 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 KIR2DL5BQ8NHK3 375 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 OVOL2Q9BRP0 275 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 KRTAP17-1Q9BYP8 105 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 ZMAT5Q9UDW3 170 aaKnown RBP5.28□□□□□ -1.56
ATXN3-221ENST00000553498 HHLA3Q9XRX5 114 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 PYGO1Q9Y3Y4 419 aa5.28□□□□□ -1.56
ATXN3-221ENST00000553498 GIG44P09565 113 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-221ENST00000553498 AZU1P20160 251 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 PMVKQ15126 192 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 COL5A1-AS1Q5SY13 56 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 LURAP1LQ8IV03 231 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 BOD1L2Q8IYS8 172 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-221ENST00000553498 C20orf203Q8NBC4 194 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 OR4C5Q8NGB2 326 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 BAALCQ8WXS3 180 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 SNHG12Q9BXW3 62 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 DKK2Q9UBU2 259 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 TP53TG1Q9Y2A0 90 aa5.27□□□□□ -1.57
ATXN3-221ENST00000553498 CHTOPQ9Y3Y2 248 aaKnown RBP5.27□□□□□ -1.57
ATXN3-221ENST00000553498 TRGV1A0A0A0MS02 117 aa5.26□□□□□ -1.57
ATXN3-221ENST00000553498 TSHBP01222 138 aa5.26□□□□□ -1.57
ATXN3-221ENST00000553498 APOC4P55056 127 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms