RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 RBFOX3A6NFN3 312 aa12.86□□□□□ -0.35
IFT43-204ENST00000553338 IFNA1P01562 189 aa12.86□□□□□ -0.35
IFT43-204ENST00000553338 MEF2BQ02080 365 aaPredicted RBP12.86□□□□□ -0.35
IFT43-204ENST00000553338 TCTE3Q8IZS6 198 aa12.86□□□□□ -0.35
IFT43-204ENST00000553338 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
IFT43-204ENST00000553338 PDE6DO43924 150 aa12.85□□□□□ -0.35
IFT43-204ENST00000553338 IGLV2-8P01709 118 aa12.85□□□□□ -0.35
IFT43-204ENST00000553338 C1QBP02746 253 aa12.85□□□□□ -0.35
IFT43-204ENST00000553338 RPS20P60866 119 aaKnown RBP12.85□□□□□ -0.35
IFT43-204ENST00000553338 Q0VG73 95 aa12.85□□□□□ -0.35
IFT43-204ENST00000553338 Q8N976 141 aa12.85□□□□□ -0.35
IFT43-204ENST00000553338 FER1L6-AS1Q8NA97 138 aa12.85□□□□□ -0.35
IFT43-204ENST00000553338 CHCHD5Q9BSY4 110 aa12.85□□□□□ -0.35
IFT43-204ENST00000553338 KIF25-AS1Q9Y6Z4 181 aa12.85□□□□□ -0.35
IFT43-204ENST00000553338 CRPP02741 224 aa12.84□□□□□ -0.35
IFT43-204ENST00000553338 MGPP08493 103 aa12.84□□□□□ -0.35
IFT43-204ENST00000553338 MPV17L2Q567V2 206 aa12.84□□□□□ -0.35
IFT43-204ENST00000553338 C15orf54Q8N8G6 183 aa12.84□□□□□ -0.35
IFT43-204ENST00000553338 SMIM12Q96EX1 92 aa12.84□□□□□ -0.35
IFT43-204ENST00000553338 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
IFT43-204ENST00000553338 FAT1Q14517 4588 aa12.83□□□□□ -0.35
IFT43-204ENST00000553338 C19orf71A6NCJ1 209 aa12.83□□□□□ -0.36
IFT43-204ENST00000553338 IGLC6P0CF74 106 aa12.83□□□□□ -0.36
IFT43-204ENST00000553338 BCL2P10415 239 aa12.83□□□□□ -0.36
IFT43-204ENST00000553338 ATRAIDQ6UW56 229 aa12.83□□□□□ -0.36
IFT43-204ENST00000553338 SLC51BQ86UW2 128 aa12.83□□□□□ -0.36
IFT43-204ENST00000553338 C1orf43Q9BWL3 253 aa12.83□□□□□ -0.36
IFT43-204ENST00000553338 XKRY2A2RUG3 117 aa12.82□□□□□ -0.36
IFT43-204ENST00000553338 P01737 135 aa12.82□□□□□ -0.36
IFT43-204ENST00000553338 ANGP03950 147 aaKnown RBP12.82□□□□□ -0.36
IFT43-204ENST00000553338 PKIAP61925 76 aa12.82□□□□□ -0.36
IFT43-204ENST00000553338 CACNG7P62955 275 aa12.82□□□□□ -0.36
IFT43-204ENST00000553338 LINC01620Q4KN68 170 aa12.82□□□□□ -0.36
IFT43-204ENST00000553338 TMEM97Q5BJF2 176 aa12.82□□□□□ -0.36
IFT43-204ENST00000553338 VAX2Q9UIW0 290 aa12.82□□□□□ -0.36
IFT43-204ENST00000553338 ENHOQ6UWT2 76 aa12.81□□□□□ -0.36
IFT43-204ENST00000553338 BIN3Q9NQY0 253 aa12.81□□□□□ -0.36
IFT43-204ENST00000553338 TRBV20OR9-2A0A075B6H5 130 aa12.8□□□□□ -0.36
IFT43-204ENST00000553338 Q6ZSA8 131 aa12.8□□□□□ -0.36
IFT43-204ENST00000553338 NTM-AS1Q6ZSK4 140 aa12.8□□□□□ -0.36
IFT43-204ENST00000553338 TRBV25-1A0A075B6N4 114 aa12.79□□□□□ -0.36
IFT43-204ENST00000553338 F2Z2F3 143 aa12.79□□□□□ -0.36
IFT43-204ENST00000553338 H7C1H1 209 aa12.79□□□□□ -0.36
IFT43-204ENST00000553338 SUMO4Q6EEV6 95 aa12.79□□□□□ -0.36
IFT43-204ENST00000553338 M0QY20 66 aa12.78□□□□□ -0.36
IFT43-204ENST00000553338 TAGLN2P37802 199 aaKnown RBP12.78□□□□□ -0.36
IFT43-204ENST00000553338 GAGE6Q13070 117 aa12.78□□□□□ -0.36
IFT43-204ENST00000553338 TRGC1P0CF51 173 aa12.77□□□□□ -0.37
IFT43-204ENST00000553338 C14orf177Q52M58 125 aa12.77□□□□□ -0.37
IFT43-204ENST00000553338 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.37
IFT43-204ENST00000553338 DNAH8Q96JB1 4490 aa12.76□□□□□ -0.37
IFT43-204ENST00000553338 VPS13BQ7Z7G8 4022 aa12.76□□□□□ -0.37
IFT43-204ENST00000553338 IGHV1-24A0A0C4DH33 117 aa12.76□□□□□ -0.37
IFT43-204ENST00000553338 HLA-DQA1P01909 254 aa12.76□□□□□ -0.37
IFT43-204ENST00000553338 RBX1P62877 108 aa12.76□□□□□ -0.37
IFT43-204ENST00000553338 MIAQ16674 131 aa12.76□□□□□ -0.37
IFT43-204ENST00000553338 CLPSL2Q6UWE3 100 aa12.76□□□□□ -0.37
IFT43-204ENST00000553338 NUDT10Q8NFP7 164 aa12.76□□□□□ -0.37
IFT43-204ENST00000553338 NUDT11Q96G61 164 aa12.76□□□□□ -0.37
IFT43-204ENST00000553338 NKX2-5P52952 324 aaPredicted RBP12.75□□□□□ -0.37
IFT43-204ENST00000553338 IQCJQ1A5X6 159 aa12.75□□□□□ -0.37
IFT43-204ENST00000553338 Q6ZNX1 250 aa12.75□□□□□ -0.37
IFT43-204ENST00000553338 DPH3P1Q9H4G8 78 aa12.75□□□□□ -0.37
IFT43-204ENST00000553338 NTF3P20783 257 aa12.74□□□□□ -0.37
IFT43-204ENST00000553338 RASL11AQ6T310 242 aa12.74□□□□□ -0.37
IFT43-204ENST00000553338 AKAP14Q86UN6 197 aa12.74□□□□□ -0.37
IFT43-204ENST00000553338 LINC00528Q8N1L1 170 aa12.74□□□□□ -0.37
IFT43-204ENST00000553338 LINC00269Q8N2A0 174 aa12.74□□□□□ -0.37
IFT43-204ENST00000553338 PLA2G1BP04054 148 aaKnown RBP12.73□□□□□ -0.37
IFT43-204ENST00000553338 SCXQ7RTU7 201 aa12.73□□□□□ -0.37
IFT43-204ENST00000553338 C9orf62Q8N4C0 152 aa12.73□□□□□ -0.37
IFT43-204ENST00000553338 RNASE7Q9H1E1 156 aaKnown RBP12.73□□□□□ -0.37
IFT43-204ENST00000553338 RPP21Q9H633 154 aaKnown RBP12.73□□□□□ -0.37
IFT43-204ENST00000553338 hCG_2014768A0A024R1R8 64 aa12.72□□□□□ -0.37
IFT43-204ENST00000553338 USP17L23D6RBM5 183 aa12.72□□□□□ -0.37
IFT43-204ENST00000553338 CTRLP40313 264 aa12.72□□□□□ -0.37
IFT43-204ENST00000553338 TWIST1Q15672 202 aa12.72□□□□□ -0.37
IFT43-204ENST00000553338 PRR34Q9NV39 138 aa12.72□□□□□ -0.37
IFT43-204ENST00000553338 K7EN84 100 aa12.71□□□□□ -0.37
IFT43-204ENST00000553338 WDR73Q6P4I2 378 aa12.71□□□□□ -0.37
IFT43-204ENST00000553338 OCC1Q8TAD7 63 aa12.71□□□□□ -0.37
IFT43-204ENST00000553338 TMEM243Q9BU79 118 aa12.71□□□□□ -0.37
IFT43-204ENST00000553338 NIT2Q9NQR4 276 aa12.71□□□□□ -0.37
IFT43-204ENST00000553338 ALKAL2Q6UX46 152 aa12.7□□□□□ -0.38
IFT43-204ENST00000553338 DEFB104AQ8WTQ1 72 aa12.7□□□□□ -0.38
IFT43-204ENST00000553338 CHAC1Q9BUX1 264 aa12.7□□□□□ -0.38
IFT43-204ENST00000553338 BLOC1S1P78537 153 aa12.69□□□□□ -0.38
IFT43-204ENST00000553338 REG3AQ06141 175 aa12.69□□□□□ -0.38
IFT43-204ENST00000553338 PGLYRP4Q96LB8 373 aa12.68□□□□□ -0.38
IFT43-204ENST00000553338 CNFNQ9BYD5 112 aa12.68□□□□□ -0.38
IFT43-204ENST00000553338 IGLV10-54A0A075B6I4 117 aa12.67□□□□□ -0.38
IFT43-204ENST00000553338 UBE2L6O14933 153 aa12.67□□□□□ -0.38
IFT43-204ENST00000553338 PRSS1P07477 247 aa12.67□□□□□ -0.38
IFT43-204ENST00000553338 COTL1Q14019 142 aa12.67□□□□□ -0.38
IFT43-204ENST00000553338 KRTAP26-1Q6PEX3 210 aa12.67□□□□□ -0.38
IFT43-204ENST00000553338 C20orf203Q8NBC4 194 aa12.67□□□□□ -0.38
IFT43-204ENST00000553338 TMEM250H0YL14 139 aa12.66□□□□□ -0.38
IFT43-204ENST00000553338 AMTP48728 403 aa12.66□□□□□ -0.38
IFT43-204ENST00000553338 CEBPGP53567 150 aa12.66□□□□□ -0.38
IFT43-204ENST00000553338 CIRBP-AS1Q8TBR5 109 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms