RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 TRGV4A0A0C4DH28 118 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 GYPEP15421 78 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 NTF3P20783 257 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 EVI2AP22794 236 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 SLAQ13239 276 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 RHOHQ15669 191 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 SPANXN1Q5VSR9 72 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 GATD1Q8NB37 220 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 PGLYRP4Q96LB8 373 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 UPK3BQ9BT76 320 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 TPPP3Q9BW30 176 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 LINC00588Q9Y4M8 146 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 ICOSQ9Y6W8 199 aa5.28□□□□□ -1.56
NPAS3-213ENST00000552874 TIRAPP58753 221 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 ESRGQ1W209 222 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 FAM74A4Q5TZK3 123 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 SUMO4Q6EEV6 95 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 C15orf54Q8N8G6 183 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 NEXN-AS1Q8NBZ9 246 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 CLRN3Q8NCR9 226 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 ZNRF2Q8NHG8 242 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 RNF185Q96GF1 192 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 C12orf57Q99622 126 aa5.27□□□□□ -1.57
NPAS3-213ENST00000552874 MRPS16Q9Y3D3 137 aaKnown RBP5.27□□□□□ -1.57
NPAS3-213ENST00000552874 TRBV10-1A0A0K0K1A3 114 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 A0A1B0GUT8 65 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 M0QY20 66 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 NUDT3O95989 172 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 TRGC1P0CF51 173 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 RAB4BP61018 213 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 UBE2D3P61077 147 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 UBE2D2P62837 147 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 Q6ZR54 194 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 KRTAP1-5Q9BYS1 174 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 DPH3P1Q9H4G8 78 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 NAT8BQ9UHF3 227 aa5.26□□□□□ -1.57
NPAS3-213ENST00000552874 LINC00587B1AMM8 73 aa5.25□□□□□ -1.57
NPAS3-213ENST00000552874 PPP1R2P9O14990 202 aa5.25□□□□□ -1.57
NPAS3-213ENST00000552874 GAS8-AS1O95177 125 aa5.25□□□□□ -1.57
NPAS3-213ENST00000552874 SMIM6P0DI80 62 aa5.25□□□□□ -1.57
NPAS3-213ENST00000552874 FAM3BP58499 235 aaPredicted RBP5.25□□□□□ -1.57
NPAS3-213ENST00000552874 ZNF56Q15929 161 aa5.25□□□□□ -1.57
NPAS3-213ENST00000552874 MRPL23Q16540 153 aaKnown RBP5.25□□□□□ -1.57
NPAS3-213ENST00000552874 LYPD5Q6UWN5 251 aa5.25□□□□□ -1.57
NPAS3-213ENST00000552874 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.25□□□□□ -1.57
NPAS3-213ENST00000552874 TMEM191AQ9H0A3 160 aa5.25□□□□□ -1.57
NPAS3-213ENST00000552874 A0A087WWC5 75 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 TRAV26-2A0A0B4J265 109 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 LY6G6CO95867 125 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 SRIP30626 198 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 RHEBQ15382 184 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 TWIST1Q15672 202 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 NEGR1Q7Z3B1 354 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 ATP5L2Q7Z4Y8 100 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 YPEL4Q96NS1 127 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 PRADC1Q9BSG0 188 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 RYR1P21817 5038 aa5.24□□□□□ -1.57
NPAS3-213ENST00000552874 C7orf77A4D0Y5 90 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 GAGE12JA6NER3 117 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 MT-ND4LP03901 98 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 MGPP08493 103 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 RAB4AP20338 218 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 RPS10P46783 165 aaKnown RBP5.23□□□□□ -1.57
NPAS3-213ENST00000552874 GAGE1Q13065 139 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 GAGE4Q13068 117 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 GAGE5Q13069 117 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 GAGE13Q4V321 117 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 MRPL54Q6P161 138 aaKnown RBP5.23□□□□□ -1.57
NPAS3-213ENST00000552874 WFDC10BQ8IUB3 73 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 AMN1Q8IY45 258 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 NRACQ8N912 160 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 RPL39LQ96EH5 51 aaKnown RBP5.23□□□□□ -1.57
NPAS3-213ENST00000552874 IMMP2LQ96T52 175 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 TMEM242Q9NWH2 141 aa5.23□□□□□ -1.57
NPAS3-213ENST00000552874 HSPG2P98160 4391 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 TRBV7-3A0A075B6L6 115 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 TRBV6-5A0A0K0K1A5 114 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 A0A1B0GW15 77 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 HBBP68871 147 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 LELP1Q5T871 98 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 FAM104BQ5XKR9 115 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 RASL11AQ6T310 242 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 ATRAIDQ6UW56 229 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 NTM-AS1Q6ZSK4 140 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 SH2D6Q7Z4S9 175 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 ATP6V0E2Q8NHE4 81 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 FRZBQ92765 325 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 CTDSP1Q9GZU7 261 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 GTSF1LQ9H1H1 148 aa5.22□□□□□ -1.57
NPAS3-213ENST00000552874 TRAV9-1A0A075B6T8 112 aa5.21□□□□□ -1.58
NPAS3-213ENST00000552874 NCR2O95944 276 aa5.21□□□□□ -1.58
NPAS3-213ENST00000552874 S100A8P05109 93 aa5.21□□□□□ -1.58
NPAS3-213ENST00000552874 DNAH10OSP0CZ25 163 aa5.21□□□□□ -1.58
NPAS3-213ENST00000552874 SMIM17P0DL12 118 aa5.21□□□□□ -1.58
NPAS3-213ENST00000552874 CCL18P55774 89 aa5.21□□□□□ -1.58
NPAS3-213ENST00000552874 RPL36AP83881 106 aaKnown RBP5.21□□□□□ -1.58
NPAS3-213ENST00000552874 RIGQ13278 110 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms