RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 BAGE2Q86Y30 109 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 Q8N2B8 174 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 Q8N6K4 173 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 ZFAND2AQ8N6M9 145 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 C5orf17Q8NAS9 161 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 OR4B1Q8NGF8 309 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 ZCCHC13Q8WW36 166 aaKnown RBP1.01□□□□□ -2.25
LIMA1-209ENST00000552008 MBD3L1Q8WWY6 194 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 IMMP2LQ96T52 175 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 SMIM7Q9BQ49 75 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 FAM103A1Q9BTL3 118 aaKnown RBP1.01□□□□□ -2.25
LIMA1-209ENST00000552008 NPCDR1Q9BY65 106 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 OTORQ9NRC9 128 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM242Q9NWH2 141 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 NAT8Q9UHE5 227 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 SMPXQ9UHP9 88 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 EPDR1Q9UM22 224 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 SOX21Q9Y651 276 aaPredicted RBP1.01□□□□□ -2.25
LIMA1-209ENST00000552008 LY96Q9Y6Y9 160 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 PTPRZ1P23471 2315 aaPredicted RBP1.01□□□□□ -2.25
LIMA1-209ENST00000552008 MYO9BQ13459 2157 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 NUP210LQ5VU65 1888 aa1.01□□□□□ -2.25
LIMA1-209ENST00000552008 A0A0C4DFX4 3053 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 UNC80Q8N2C7 3258 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 MYLKQ15746 1914 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 IGKV3-7A0A075B6H7 116 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 TRBV19A0A075B6N1 114 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 TRGV2A0A075B6R0 118 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 A0A087WWC5 75 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 TRAV8-1A0A0A6YYK1 113 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 TRAV3A0A0B4J244 114 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 TRBV6-1A0A0K0K1D8 114 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 A0A1B0GW64 132 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 IGLC7A0M8Q6 106 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 A8MWV9 139 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 G3V318 75 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 I3L2K1 104 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 K7EIM0 57 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 K7EMI3 77 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 SLC17A3O00476 420 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 SNCGO76070 127 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 PPBPP02775 128 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 TFF1P04155 84 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 CD7P09564 240 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 SFTA3P0C7M3 94 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 IGLC1P0CG04 106 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 SPART-AS1P0CW21 52 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 ARL14EPLP0DKL9 152 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 P0DMU3 169 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 FAM231AP0DMU4 169 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 FAM231CP0DMU5 169 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 BCL2P10415 239 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 ESDP10768 282 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 HTN1P15515 57 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 GCHFRP30047 84 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 FCER1GP30273 86 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 ASIPP42127 132 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 HINT1P49773 126 aaPredicted RBP1□□□□□ -2.25
LIMA1-209ENST00000552008 NKX2-5P52952 324 aaPredicted RBP1□□□□□ -2.25
LIMA1-209ENST00000552008 CCL20P78556 96 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 ELOBQ15370 118 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 ADIRFQ15847 76 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 PMCHL1Q16048 86 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 BATFQ16520 125 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 SPRNQ5BIV9 151 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 COL5A1-AS1Q5SY13 56 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 IBA57Q5T440 356 aaKnown RBP1□□□□□ -2.25
LIMA1-209ENST00000552008 MIC13Q5XKP0 118 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 MRPL54Q6P161 138 aaKnown RBP1□□□□□ -2.25
LIMA1-209ENST00000552008 AMTNQ6UX39 209 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 FOXI2Q6ZQN5 318 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 C9orf62Q8N4C0 152 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 COPS9Q8WXC6 57 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 RAB37Q96AX2 223 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 PACRGQ96M98 296 aaPredicted RBP1□□□□□ -2.25
LIMA1-209ENST00000552008 ODF3Q96PU9 254 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 MGST2Q99735 147 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 PMCHL2Q9BQD1 86 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 MIEN1Q9BRT3 115 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 PRADC1Q9BSG0 188 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM70Q9BUB7 260 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 MS4A6AQ9H2W1 248 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 DOK5Q9P104 306 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 NAT8BQ9UHF3 227 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 PKIGQ9Y2B9 76 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 KLK5Q9Y337 293 aaPredicted RBP1□□□□□ -2.25
LIMA1-209ENST00000552008 MRPS16Q9Y3D3 137 aaKnown RBP1□□□□□ -2.25
LIMA1-209ENST00000552008 TTC28Q96AY4 2481 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 TNRC6BQ9UPQ9 1833 aaKnown RBP1□□□□□ -2.25
LIMA1-209ENST00000552008 EP300Q09472 2414 aaPredicted RBP1□□□□□ -2.25
LIMA1-209ENST00000552008 MUC6Q6W4X9 2439 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 CACNA1EQ15878 2313 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 CDH23Q9H251 3354 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 ZNF292O60281 2723 aa1□□□□□ -2.25
LIMA1-209ENST00000552008 FANCMQ8IYD8 2048 aa0.99□□□□□ -2.25
LIMA1-209ENST00000552008 CCDC88CQ9P219 2028 aa0.99□□□□□ -2.25
LIMA1-209ENST00000552008 PIEZO1Q92508 2521 aa0.99□□□□□ -2.25
LIMA1-209ENST00000552008 OTOGLQ3ZCN5 2332 aa0.99□□□□□ -2.25
LIMA1-209ENST00000552008 URB1O60287 2271 aaKnown RBP0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms