RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 Q6ZQT7 251 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 LRRC75A-AS1Q8N1F1 130 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 AMELXQ99217 191 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 FAM110AQ9BQ89 295 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 TIMM21Q9BVV7 248 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 SPANXDQ9BXN6 97 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 GEMIN7Q9H840 131 aaKnown RBP3.98□□□□□ -1.77
CCNT1-204ENST00000551989 YAE1D1Q9NRH1 226 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 SPANXCQ9NY87 97 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 PEMTQ9UBM1 199 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 LINC00527Q9UJ94 153 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 TSSC4Q9Y5U2 329 aaPredicted RBP3.98□□□□□ -1.77
CCNT1-204ENST00000551989 VPS13AQ96RL7 3174 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 FRYLO94915 3013 aa3.98□□□□□ -1.77
CCNT1-204ENST00000551989 MAP1BP46821 2468 aaKnown RBP3.98□□□□□ -1.77
CCNT1-204ENST00000551989 HIVEP3Q5T1R4 2406 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 IGLV4-3A0A075B6K6 122 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 IGHV4-30-2A0A087WSY4 118 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 A0A087WWL8 130 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 LOC107984156A0A0G2JMH3 177 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 TRBV30A0A0K0K1B3 111 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 TINCRA0A1B0GVN0 87 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 M0R2P5 195 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 COX6CP09669 75 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 ZNF688P0C7X2 276 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 CFC1BP0CG36 223 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 CFC1P0CG37 223 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 ZNF22P17026 224 aaPredicted RBP3.97□□□□□ -1.77
CCNT1-204ENST00000551989 AZU1P20160 251 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 GNLYP22749 145 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 BLCAPP62952 87 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 ATXN8Q156A1 80 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 AMTNQ6UX39 209 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 ARL17AQ8IVW1 177 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 Q8N1Y9 231 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 ZNRF2Q8NHG8 242 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 VPREB3Q9UKI3 123 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 ERG28Q9UKR5 140 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 NACAE9PAV3 2078 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 SPTBN2O15020 2390 aa3.97□□□□□ -1.77
CCNT1-204ENST00000551989 DMDP11532 3685 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 IGHV1-58A0A0C4DH39 117 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 H3BT86 120 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 FSHBP01225 129 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 IGHV3-33P01772 117 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 SCGB1C2P0DMR2 95 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 CD28P10747 220 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 PSMB2P49721 201 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 RPL39P62891 51 aaKnown RBP3.96□□□□□ -1.78
CCNT1-204ENST00000551989 LY6DQ14210 128 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 MRPL23Q16540 153 aaKnown RBP3.96□□□□□ -1.78
CCNT1-204ENST00000551989 FAM74A4Q5TZK3 123 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 Q8N2B8 174 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 ZNF418Q8TF45 676 aaPredicted RBP3.96□□□□□ -1.78
CCNT1-204ENST00000551989 TMEM263Q8WUH6 116 aaKnown RBP3.96□□□□□ -1.78
CCNT1-204ENST00000551989 TNFRSF18Q9Y5U5 241 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.96□□□□□ -1.78
CCNT1-204ENST00000551989 GVINP1Q7Z2Y8 2422 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 COL6A6A6NMZ7 2263 aa3.96□□□□□ -1.78
CCNT1-204ENST00000551989 ANKRD11Q6UB99 2663 aaPredicted RBP3.96□□□□□ -1.78
CCNT1-204ENST00000551989 RIF1Q5UIP0 2472 aaKnown RBP3.95□□□□□ -1.78
CCNT1-204ENST00000551989 PRRC2AP48634 2157 aaKnown RBP3.95□□□□□ -1.78
CCNT1-204ENST00000551989 IGKV3-7A0A075B6H7 116 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 IGLV5-45A0A087WSX0 123 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 TCL1BO95988 128 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 SRD5A1P18405 259 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 RPL13AP40429 203 aaKnown RBP3.95□□□□□ -1.78
CCNT1-204ENST00000551989 CMC4P56277 68 aaPredicted RBP3.95□□□□□ -1.78
CCNT1-204ENST00000551989 TSPEAR-AS2P59090 65 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 SPINK13Q1W4C9 94 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 DEFB112Q30KQ8 113 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 ZFAND6Q6FIF0 208 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 Q6YL49 198 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 SH2D6Q7Z4S9 175 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 FAM19A3Q7Z5A8 133 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 TMEM86BQ8N661 226 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 KLHL30-AS1Q8NEE0 82 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 GTSF1LQ9H1H1 148 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 CDIP1Q9H305 208 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 CFAP54Q96N23 3096 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 TTC28Q96AY4 2481 aa3.95□□□□□ -1.78
CCNT1-204ENST00000551989 CR1P17927 2039 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 TRBV10-1A0A0K0K1A3 114 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 TRBV10-2A0A0K0K1G8 114 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 FAM240AA0A1B0GVK7 77 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 SLC25A20O43772 301 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 INSP01308 110 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 IGHV3-53P01767 116 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 IGHV3-30-3P0DP02 117 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 HOXD3P31249 432 aaPredicted RBP3.94□□□□□ -1.78
CCNT1-204ENST00000551989 SYNJ2BPP57105 145 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 DEFB1P60022 68 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 HERVK_113P63121 156 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 CIRBPQ14011 172 aaKnown RBP3.94□□□□□ -1.78
CCNT1-204ENST00000551989 MIAQ16674 131 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 BEAN1Q3B7T3 259 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 Q6Q795 121 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 C4orf3Q8WVX3 66 aa3.94□□□□□ -1.78
CCNT1-204ENST00000551989 DUX5Q96PT3 197 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms