RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 IGLV10-54A0A075B6I4 117 aa13.69□□□□□ -0.22
SMARCD1-212ENST00000551966 TRBV6-1A0A0K0K1D8 114 aa13.69□□□□□ -0.22
SMARCD1-212ENST00000551966 RPL7L1Q6DKI1 246 aaKnown RBP13.69□□□□□ -0.22
SMARCD1-212ENST00000551966 hDV102S1A0JD36 115 aa13.68□□□□□ -0.22
SMARCD1-212ENST00000551966 UBE2G1P62253 170 aa13.68□□□□□ -0.22
SMARCD1-212ENST00000551966 DERL1Q9BUN8 251 aa13.68□□□□□ -0.22
SMARCD1-212ENST00000551966 MUC21A0A0G2JKD1 596 aa13.67□□□□□ -0.22
SMARCD1-212ENST00000551966 MUC21A0A140T8X8 626 aa13.67□□□□□ -0.22
SMARCD1-212ENST00000551966 REG3AQ06141 175 aa13.67□□□□□ -0.22
SMARCD1-212ENST00000551966 TMEM97Q5BJF2 176 aa13.67□□□□□ -0.22
SMARCD1-212ENST00000551966 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
SMARCD1-212ENST00000551966 SPACA4Q8TDM5 124 aa13.67□□□□□ -0.22
SMARCD1-212ENST00000551966 RNF185Q96GF1 192 aa13.67□□□□□ -0.22
SMARCD1-212ENST00000551966 LINC01600Q96MT4 127 aa13.67□□□□□ -0.22
SMARCD1-212ENST00000551966 ZNF471Q9BX82 626 aaPredicted RBP13.67□□□□□ -0.22
SMARCD1-212ENST00000551966 KIF25-AS1Q9Y6Z4 181 aa13.67□□□□□ -0.22
SMARCD1-212ENST00000551966 IGHV3-64A0A075B6Q5 118 aa13.66□□□□□ -0.22
SMARCD1-212ENST00000551966 F5H697 171 aa13.66□□□□□ -0.22
SMARCD1-212ENST00000551966 PHOX2AO14813 284 aa13.66□□□□□ -0.22
SMARCD1-212ENST00000551966 SSBP4Q9BWG4 385 aaPredicted RBP13.66□□□□□ -0.22
SMARCD1-212ENST00000551966 PLAC8Q9NZF1 115 aa13.66□□□□□ -0.22
SMARCD1-212ENST00000551966 C20orf203Q8NBC4 194 aa13.65□□□□□ -0.22
SMARCD1-212ENST00000551966 ALG5Q9Y673 324 aa13.65□□□□□ -0.22
SMARCD1-212ENST00000551966 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
SMARCD1-212ENST00000551966 SNAI2O43623 268 aa13.64□□□□□ -0.23
SMARCD1-212ENST00000551966 DEFA3P59666 94 aa13.64□□□□□ -0.23
SMARCD1-212ENST00000551966 IQCJQ1A5X6 159 aa13.64□□□□□ -0.23
SMARCD1-212ENST00000551966 A6NHS1 94 aa13.63□□□□□ -0.23
SMARCD1-212ENST00000551966 SSTP61278 116 aa13.63□□□□□ -0.23
SMARCD1-212ENST00000551966 GFRA4Q9GZZ7 299 aa13.63□□□□□ -0.23
SMARCD1-212ENST00000551966 DPH3P1Q9H4G8 78 aa13.63□□□□□ -0.23
SMARCD1-212ENST00000551966 RAB5CP51148 216 aa13.62□□□□□ -0.23
SMARCD1-212ENST00000551966 IGLV4-60A0A075B6I1 120 aa13.61□□□□□ -0.23
SMARCD1-212ENST00000551966 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.61□□□□□ -0.23
SMARCD1-212ENST00000551966 TRAV8-4A0A0B4J246 113 aa13.61□□□□□ -0.23
SMARCD1-212ENST00000551966 P01737 135 aa13.61□□□□□ -0.23
SMARCD1-212ENST00000551966 CXCL1P09341 107 aa13.61□□□□□ -0.23
SMARCD1-212ENST00000551966 OR5AL1P0C617 328 aa13.61□□□□□ -0.23
SMARCD1-212ENST00000551966 FHITP49789 147 aa13.61□□□□□ -0.23
SMARCD1-212ENST00000551966 DEFA1P59665 94 aa13.61□□□□□ -0.23
SMARCD1-212ENST00000551966 SPANXN1Q5VSR9 72 aa13.61□□□□□ -0.23
SMARCD1-212ENST00000551966 AP5S1Q9NUS5 200 aa13.61□□□□□ -0.23
SMARCD1-212ENST00000551966 IGHV1-24A0A0C4DH33 117 aa13.6□□□□□ -0.23
SMARCD1-212ENST00000551966 CST9LP1Q5W188 147 aa13.6□□□□□ -0.23
SMARCD1-212ENST00000551966 BORCS7-ASMTA0A0B4J1R7 106 aa13.59□□□□□ -0.23
SMARCD1-212ENST00000551966 MAP1LC3B2A6NCE7 125 aa13.59□□□□□ -0.23
SMARCD1-212ENST00000551966 AKR1C3P42330 323 aa13.59□□□□□ -0.23
SMARCD1-212ENST00000551966 AKR1C8PQ5T2L2 129 aa13.59□□□□□ -0.23
SMARCD1-212ENST00000551966 TCEAL7Q9BRU2 100 aa13.59□□□□□ -0.23
SMARCD1-212ENST00000551966 MLST8Q9BVC4 326 aa13.59□□□□□ -0.23
SMARCD1-212ENST00000551966 MAP1LC3BQ9GZQ8 125 aa13.59□□□□□ -0.23
SMARCD1-212ENST00000551966 A0A1B0GUV1 79 aa13.58□□□□□ -0.24
SMARCD1-212ENST00000551966 M0QY20 66 aa13.58□□□□□ -0.24
SMARCD1-212ENST00000551966 KRTAP10-8P60410 259 aa13.58□□□□□ -0.24
SMARCD1-212ENST00000551966 C7orf33Q8WU49 177 aa13.58□□□□□ -0.24
SMARCD1-212ENST00000551966 COX6A2Q02221 97 aa13.57□□□□□ -0.24
SMARCD1-212ENST00000551966 INO80EQ8NBZ0 244 aaPredicted RBP13.57□□□□□ -0.24
SMARCD1-212ENST00000551966 PRSS3P2Q8NHM4 247 aa13.56□□□□□ -0.24
SMARCD1-212ENST00000551966 STOML3Q8TAV4 291 aa13.56□□□□□ -0.24
SMARCD1-212ENST00000551966 GTSF1Q8WW33 167 aa13.56□□□□□ -0.24
SMARCD1-212ENST00000551966 A0A0J9YXV3 536 aa13.55□□□□□ -0.24
SMARCD1-212ENST00000551966 PAGE4O60829 102 aa13.55□□□□□ -0.24
SMARCD1-212ENST00000551966 SMIM17P0DL12 118 aa13.55□□□□□ -0.24
SMARCD1-212ENST00000551966 GZMBP10144 247 aa13.55□□□□□ -0.24
SMARCD1-212ENST00000551966 PRR3P79522 188 aaKnown RBP13.55□□□□□ -0.24
SMARCD1-212ENST00000551966 C15orf56Q8N910 161 aa13.55□□□□□ -0.24
SMARCD1-212ENST00000551966 MED28Q9H204 178 aa13.55□□□□□ -0.24
SMARCD1-212ENST00000551966 WDR73Q6P4I2 378 aa13.54□□□□□ -0.24
SMARCD1-212ENST00000551966 BAGE2Q86Y30 109 aa13.54□□□□□ -0.24
SMARCD1-212ENST00000551966 MAJINQ3KP22 176 aa13.53□□□□□ -0.24
SMARCD1-212ENST00000551966 AP1S3Q96PC3 154 aa13.53□□□□□ -0.24
SMARCD1-212ENST00000551966 TMEM243Q9BU79 118 aa13.53□□□□□ -0.24
SMARCD1-212ENST00000551966 FXYD6-FXYD2A0A087WZ82 144 aa13.52□□□□□ -0.25
SMARCD1-212ENST00000551966 SCO2A0A1W2PP80 73 aa13.52□□□□□ -0.25
SMARCD1-212ENST00000551966 S100A9P06702 114 aaKnown RBP13.52□□□□□ -0.25
SMARCD1-212ENST00000551966 RPS10P46783 165 aaKnown RBP13.52□□□□□ -0.25
SMARCD1-212ENST00000551966 SUMO4Q6EEV6 95 aa13.52□□□□□ -0.25
SMARCD1-212ENST00000551966 LYPD6BQ8NI32 183 aa13.52□□□□□ -0.25
SMARCD1-212ENST00000551966 CYTL1Q9NRR1 136 aa13.52□□□□□ -0.25
SMARCD1-212ENST00000551966 IGKV2-24A0A0C4DH68 120 aa13.51□□□□□ -0.25
SMARCD1-212ENST00000551966 NDUFS6O75380 124 aaKnown RBP13.51□□□□□ -0.25
SMARCD1-212ENST00000551966 GIPP09681 153 aaPredicted RBP13.51□□□□□ -0.25
SMARCD1-212ENST00000551966 NKX2-5P52952 324 aaPredicted RBP13.51□□□□□ -0.25
SMARCD1-212ENST00000551966 GAGE12HA6NDE8 117 aa13.5□□□□□ -0.25
SMARCD1-212ENST00000551966 MGPP08493 103 aa13.5□□□□□ -0.25
SMARCD1-212ENST00000551966 STPG4Q8N801 248 aa13.5□□□□□ -0.25
SMARCD1-212ENST00000551966 HIGD2BQ4VC39 106 aa13.49□□□□□ -0.25
SMARCD1-212ENST00000551966 H7C1H1 209 aa13.48□□□□□ -0.25
SMARCD1-212ENST00000551966 GAS8-AS1O95177 125 aa13.48□□□□□ -0.25
SMARCD1-212ENST00000551966 SPINK6Q6UWN8 80 aa13.48□□□□□ -0.25
SMARCD1-212ENST00000551966 IGLC6P0CF74 106 aa13.47□□□□□ -0.25
SMARCD1-212ENST00000551966 SULT1A2P50226 295 aa13.47□□□□□ -0.25
SMARCD1-212ENST00000551966 SRSF9Q13242 221 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMARCD1-212ENST00000551966 CFAP161Q6P656 301 aa13.47□□□□□ -0.25
SMARCD1-212ENST00000551966 TMUB2Q71RG4 321 aa13.47□□□□□ -0.25
SMARCD1-212ENST00000551966 PGLYRP4Q96LB8 373 aa13.47□□□□□ -0.25
SMARCD1-212ENST00000551966 A0A096LNI7 61 aa13.46□□□□□ -0.25
SMARCD1-212ENST00000551966 G3V3Q6 166 aa13.46□□□□□ -0.25
SMARCD1-212ENST00000551966 RASL11AQ6T310 242 aa13.46□□□□□ -0.25
SMARCD1-212ENST00000551966 MBD3L1Q8WWY6 194 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms