RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 RPRMQ9NS64 109 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 MYH13Q9UKX3 1938 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 DAPK1P53355 1430 aa-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 PRG4Q92954 1404 aaPredicted RBP-0.41□□□□□ -2.48
SCAF11-215ENST00000551391 ANKRD30AQ9BXX3 1397 aa-0.42□□□□□ -2.48
SCAF11-215ENST00000551391 TMEM2Q9UHN6 1383 aa-0.42□□□□□ -2.48
SCAF11-215ENST00000551391 HSPG2P98160 4391 aa-0.42□□□□□ -2.48
SCAF11-215ENST00000551391 CLPSL1A2RUU4 121 aa-0.42□□□□□ -2.48
SCAF11-215ENST00000551391 ZNF815PA8K554 130 aa-0.42□□□□□ -2.48
SCAF11-215ENST00000551391 HIST1H1AQ02539 215 aaPredicted RBP-0.42□□□□□ -2.48
SCAF11-215ENST00000551391 SSBP3-AS1Q7Z2R9 100 aa-0.42□□□□□ -2.48
SCAF11-215ENST00000551391 C10orf82Q8WW14 230 aa-0.42□□□□□ -2.48
SCAF11-215ENST00000551391 CNFNQ9BYD5 112 aa-0.42□□□□□ -2.48
SCAF11-215ENST00000551391 CDK5RAP2Q96SN8 1893 aa-0.42□□□□□ -2.48
SCAF11-215ENST00000551391 TRBV10-3A0A0K0K1G6 114 aa-0.43□□□□□ -2.48
SCAF11-215ENST00000551391 PITX3O75364 302 aa-0.43□□□□□ -2.48
SCAF11-215ENST00000551391 IFNA17P01571 189 aa-0.43□□□□□ -2.48
SCAF11-215ENST00000551391 PTPN13Q12923 2485 aa-0.43□□□□□ -2.48
SCAF11-215ENST00000551391 ARFGEF1Q9Y6D6 1849 aa-0.43□□□□□ -2.48
SCAF11-215ENST00000551391 TNXBP22105 4242 aa-0.43□□□□□ -2.48
SCAF11-215ENST00000551391 CSMD3Q7Z407 3707 aa-0.43□□□□□ -2.48
SCAF11-215ENST00000551391 SPTBN2O15020 2390 aa-0.43□□□□□ -2.48
SCAF11-215ENST00000551391 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.44□□□□□ -2.48
SCAF11-215ENST00000551391 NHSL1Q5SYE7 1610 aa-0.44□□□□□ -2.48
SCAF11-215ENST00000551391 PIN1P1O15428 100 aa-0.44□□□□□ -2.48
SCAF11-215ENST00000551391 SPINK8P0C7L1 97 aa-0.44□□□□□ -2.48
SCAF11-215ENST00000551391 LPAP08519 4548 aa-0.44□□□□□ -2.48
SCAF11-215ENST00000551391 MYCBP2O75592 4640 aa-0.44□□□□□ -2.48
SCAF11-215ENST00000551391 FAM208BQ5VWN6 2430 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 LRRC37A3O60309 1634 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 TRAV1-2A0A0B4J238 106 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 A0A0D9SFI3 127 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 M0R129 80 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 CFDP00746 253 aaPredicted RBP-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 LINC00694P0DN24 101 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 SPRR2DP22532 72 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 DR1Q01658 176 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 RPL7L1Q6DKI1 246 aaKnown RBP-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 Q6ZUT4 128 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 AKAP14Q86UN6 197 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 CTAGE3PQ8IX95 158 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 GSKIPQ9P0R6 139 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 ZMYM4Q5VZL5 1548 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 ZNF292O60281 2723 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 ARHGEF10O15013 1369 aa-0.45□□□□□ -2.48
SCAF11-215ENST00000551391 J3QR89 54 aa-0.46□□□□□ -2.48
SCAF11-215ENST00000551391 APOC4-APOC2K7ER74 178 aa-0.46□□□□□ -2.48
SCAF11-215ENST00000551391 CKS1BP61024 79 aa-0.46□□□□□ -2.48
SCAF11-215ENST00000551391 KRTAP19-7Q3SYF9 63 aa-0.46□□□□□ -2.48
SCAF11-215ENST00000551391 ZNF818PQ6ZRF7 136 aa-0.46□□□□□ -2.48
SCAF11-215ENST00000551391 SMIM3Q9BZL3 60 aa-0.46□□□□□ -2.48
SCAF11-215ENST00000551391 A6NIN4 97 aa-0.47□□□□□ -2.48
SCAF11-215ENST00000551391 PIPP12273 146 aaPredicted RBP-0.47□□□□□ -2.48
SCAF11-215ENST00000551391 UBE2G1P62253 170 aa-0.47□□□□□ -2.48
SCAF11-215ENST00000551391 SCIMPQ6UWF3 145 aa-0.47□□□□□ -2.48
SCAF11-215ENST00000551391 PRO0255Q9UI72 69 aa-0.47□□□□□ -2.48
SCAF11-215ENST00000551391 IFT172Q9UG01 1749 aa-0.47□□□□□ -2.49
SCAF11-215ENST00000551391 KMT2AQ03164 3969 aa-0.47□□□□□ -2.49
SCAF11-215ENST00000551391 AKAP6Q13023 2319 aa-0.48□□□□□ -2.49
SCAF11-215ENST00000551391 CBLN1P23435 193 aa-0.48□□□□□ -2.49
SCAF11-215ENST00000551391 WFDC2Q14508 124 aa-0.48□□□□□ -2.49
SCAF11-215ENST00000551391 PSMG3Q9BT73 122 aaPredicted RBP-0.48□□□□□ -2.49
SCAF11-215ENST00000551391 FHAD1B1AJZ9 1412 aa-0.48□□□□□ -2.49
SCAF11-215ENST00000551391 PXDNQ92626 1479 aa-0.48□□□□□ -2.49
SCAF11-215ENST00000551391 M0R2Z0 102 aa-0.49□□□□□ -2.49
SCAF11-215ENST00000551391 ARPC5O15511 151 aa-0.49□□□□□ -2.49
SCAF11-215ENST00000551391 IL5P05113 134 aa-0.49□□□□□ -2.49
SCAF11-215ENST00000551391 RRAS2P62070 204 aaPredicted RBP-0.49□□□□□ -2.49
SCAF11-215ENST00000551391 BAGE3Q86Y29 109 aa-0.49□□□□□ -2.49
SCAF11-215ENST00000551391 DOPEY2Q9Y3R5 2298 aa-0.49□□□□□ -2.49
SCAF11-215ENST00000551391 STAB1Q9NY15 2570 aa-0.5□□□□□ -2.49
SCAF11-215ENST00000551391 MYH6P13533 1939 aa-0.5□□□□□ -2.49
SCAF11-215ENST00000551391 PTPRQQ9UMZ3 2332 aa-0.5□□□□□ -2.49
SCAF11-215ENST00000551391 M0R3E3 92 aa-0.5□□□□□ -2.49
SCAF11-215ENST00000551391 ALX1Q15699 326 aa-0.5□□□□□ -2.49
SCAF11-215ENST00000551391 SPTSSAQ969W0 71 aa-0.5□□□□□ -2.49
SCAF11-215ENST00000551391 ZNF609O15014 1411 aa-0.5□□□□□ -2.49
SCAF11-215ENST00000551391 NPFFO15130 113 aa-0.51□□□□□ -2.49
SCAF11-215ENST00000551391 CEP152O94986 1710 aa-0.51□□□□□ -2.49
SCAF11-215ENST00000551391 SMIM6P0DI80 62 aa-0.51□□□□□ -2.49
SCAF11-215ENST00000551391 CCL8P80075 99 aa-0.51□□□□□ -2.49
SCAF11-215ENST00000551391 C2CD3Q4AC94 2353 aa-0.52□□□□□ -2.49
SCAF11-215ENST00000551391 NDUFB6O95139 128 aa-0.52□□□□□ -2.49
SCAF11-215ENST00000551391 Q5VSD8 79 aa-0.52□□□□□ -2.49
SCAF11-215ENST00000551391 SPTSSBQ8NFR3 76 aa-0.52□□□□□ -2.49
SCAF11-215ENST00000551391 MYH9P35579 1960 aaKnown RBP-0.53□□□□□ -2.49
SCAF11-215ENST00000551391 FAM92AA1XBS5 289 aa-0.53□□□□□ -2.49
SCAF11-215ENST00000551391 K7ERU9 68 aa-0.53□□□□□ -2.49
SCAF11-215ENST00000551391 GUCA1AP43080 201 aaPredicted RBP-0.53□□□□□ -2.49
SCAF11-215ENST00000551391 DEFB109BQ30KR1 87 aa-0.53□□□□□ -2.49
SCAF11-215ENST00000551391 CFAP126Q5VTH2 177 aa-0.53□□□□□ -2.49
SCAF11-215ENST00000551391 LZICQ8WZA0 190 aa-0.53□□□□□ -2.49
SCAF11-215ENST00000551391 LINC00312Q9Y6C7 94 aa-0.53□□□□□ -2.49
SCAF11-215ENST00000551391 IFT140Q96RY7 1462 aa-0.54□□□□□ -2.5
SCAF11-215ENST00000551391 CASKIN1Q8WXD9 1431 aa-0.54□□□□□ -2.5
SCAF11-215ENST00000551391 FLNAP21333 2647 aaKnown RBP-0.54□□□□□ -2.5
SCAF11-215ENST00000551391 NWD2Q9ULI1 1742 aa-0.54□□□□□ -2.5
SCAF11-215ENST00000551391 CCL18P55774 89 aa-0.54□□□□□ -2.5
SCAF11-215ENST00000551391 PPRC1Q5VV67 1664 aaKnown RBP-0.54□□□□□ -2.5
SCAF11-215ENST00000551391 PDZD2O15018 2839 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms