RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 GFRA4Q9GZZ7 299 aa9.34□□□□□ -0.91
TROAP-213ENST00000550709 TNFRSF18Q9Y5U5 241 aa9.34□□□□□ -0.91
TROAP-213ENST00000550709 EPPK1P58107 5090 aaKnown RBP9.34□□□□□ -0.91
TROAP-213ENST00000550709 A0A087WWC5 75 aa9.33□□□□□ -0.92
TROAP-213ENST00000550709 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
TROAP-213ENST00000550709 Q8N3U1 123 aa9.33□□□□□ -0.92
TROAP-213ENST00000550709 DNAH2Q9P225 4427 aa9.32□□□□□ -0.92
TROAP-213ENST00000550709 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
TROAP-213ENST00000550709 FAM231BA6NCW3 169 aa9.32□□□□□ -0.92
TROAP-213ENST00000550709 H7C1H1 209 aa9.32□□□□□ -0.92
TROAP-213ENST00000550709 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
TROAP-213ENST00000550709 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
TROAP-213ENST00000550709 TNP2Q05952 138 aa9.31□□□□□ -0.92
TROAP-213ENST00000550709 LINC01556Q5JQF7 62 aa9.31□□□□□ -0.92
TROAP-213ENST00000550709 RASL11AQ6T310 242 aa9.31□□□□□ -0.92
TROAP-213ENST00000550709 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.31□□□□□ -0.92
TROAP-213ENST00000550709 NAT8BQ9UHF3 227 aa9.31□□□□□ -0.92
TROAP-213ENST00000550709 RIGQ13278 110 aa9.3□□□□□ -0.92
TROAP-213ENST00000550709 COMMD7Q86VX2 200 aa9.3□□□□□ -0.92
TROAP-213ENST00000550709 GATD1Q8NB37 220 aa9.3□□□□□ -0.92
TROAP-213ENST00000550709 DEFB104AQ8WTQ1 72 aa9.3□□□□□ -0.92
TROAP-213ENST00000550709 SMIM27A0A1W2PRY6 76 aa9.29□□□□□ -0.92
TROAP-213ENST00000550709 DAZ4Q86SG3 579 aaKnown RBP9.29□□□□□ -0.92
TROAP-213ENST00000550709 C10orf126Q8N4M7 172 aa9.29□□□□□ -0.92
TROAP-213ENST00000550709 DNAJC30Q96LL9 226 aa9.29□□□□□ -0.92
TROAP-213ENST00000550709 NIT2Q9NQR4 276 aa9.29□□□□□ -0.92
TROAP-213ENST00000550709 DAZ3Q9NR90 486 aaKnown RBP9.29□□□□□ -0.92
TROAP-213ENST00000550709 TRBV6-8A0A0A6YYG3 113 aa9.28□□□□□ -0.92
TROAP-213ENST00000550709 TMEM262E9PQX1 116 aa9.28□□□□□ -0.92
TROAP-213ENST00000550709 UQCC3Q6UW78 93 aa9.28□□□□□ -0.92
TROAP-213ENST00000550709 RPL39LQ96EH5 51 aaKnown RBP9.28□□□□□ -0.92
TROAP-213ENST00000550709 Q9HAA7 133 aa9.28□□□□□ -0.92
TROAP-213ENST00000550709 URGCP-MRPS24S4R325 110 aa9.28□□□□□ -0.92
TROAP-213ENST00000550709 TMEM218A2RU14 115 aa9.27□□□□□ -0.93
TROAP-213ENST00000550709 F8W036 122 aa9.27□□□□□ -0.93
TROAP-213ENST00000550709 K7EP13 123 aa9.27□□□□□ -0.93
TROAP-213ENST00000550709 CAMPP49913 170 aa9.27□□□□□ -0.93
TROAP-213ENST00000550709 PNRC1Q12796 327 aaPredicted RBP9.27□□□□□ -0.93
TROAP-213ENST00000550709 NTM-AS1Q6ZSK4 140 aa9.27□□□□□ -0.93
TROAP-213ENST00000550709 NIT1Q86X76 327 aa9.27□□□□□ -0.93
TROAP-213ENST00000550709 AMN1Q8IY45 258 aa9.27□□□□□ -0.93
TROAP-213ENST00000550709 CHCHD5Q9BSY4 110 aa9.27□□□□□ -0.93
TROAP-213ENST00000550709 TMEM191AQ9H0A3 160 aa9.27□□□□□ -0.93
TROAP-213ENST00000550709 FAT2Q9NYQ8 4349 aa9.27□□□□□ -0.93
TROAP-213ENST00000550709 BIRC6Q9NR09 4857 aa9.26□□□□□ -0.93
TROAP-213ENST00000550709 A0A087WX48 190 aa9.26□□□□□ -0.93
TROAP-213ENST00000550709 A0A1B0GVY2 172 aa9.26□□□□□ -0.93
TROAP-213ENST00000550709 PPP1R2P9O14990 202 aa9.26□□□□□ -0.93
TROAP-213ENST00000550709 MT-ND4LP03901 98 aa9.26□□□□□ -0.93
TROAP-213ENST00000550709 ADCYAP1P18509 176 aa9.26□□□□□ -0.93
TROAP-213ENST00000550709 BTF3P20290 206 aaKnown RBP9.26□□□□□ -0.93
TROAP-213ENST00000550709 MRPL54Q6P161 138 aaKnown RBP9.26□□□□□ -0.93
TROAP-213ENST00000550709 KCNIP4Q6PIL6 250 aa9.26□□□□□ -0.93
TROAP-213ENST00000550709 NFE4Q86UQ8 179 aa9.26□□□□□ -0.93
TROAP-213ENST00000550709 DNAH17Q9UFH2 4485 aa9.26□□□□□ -0.93
TROAP-213ENST00000550709 IBA57-AS1B1ANH7 110 aa9.25□□□□□ -0.93
TROAP-213ENST00000550709 GAS8-AS1O95177 125 aa9.25□□□□□ -0.93
TROAP-213ENST00000550709 RAB4AP20338 218 aa9.25□□□□□ -0.93
TROAP-213ENST00000550709 Q6ZRN7 208 aaPredicted RBP9.25□□□□□ -0.93
TROAP-213ENST00000550709 RNF185Q96GF1 192 aa9.25□□□□□ -0.93
TROAP-213ENST00000550709 IGHV1-24A0A0C4DH33 117 aa9.24□□□□□ -0.93
TROAP-213ENST00000550709 LINC00862A6NCI5 91 aa9.24□□□□□ -0.93
TROAP-213ENST00000550709 SMKR1H3BMG3 65 aa9.24□□□□□ -0.93
TROAP-213ENST00000550709 GAGE6Q13070 117 aa9.24□□□□□ -0.93
TROAP-213ENST00000550709 TMEM97Q5BJF2 176 aa9.24□□□□□ -0.93
TROAP-213ENST00000550709 KLK12Q9UKR0 248 aa9.24□□□□□ -0.93
TROAP-213ENST00000550709 TRBV25-1A0A075B6N4 114 aa9.23□□□□□ -0.93
TROAP-213ENST00000550709 NCR2O95944 276 aa9.23□□□□□ -0.93
TROAP-213ENST00000550709 COTL1Q14019 142 aa9.23□□□□□ -0.93
TROAP-213ENST00000550709 FRZBQ92765 325 aa9.23□□□□□ -0.93
TROAP-213ENST00000550709 ANAPC16Q96DE5 110 aa9.23□□□□□ -0.93
TROAP-213ENST00000550709 PSCAO43653 123 aa9.22□□□□□ -0.93
TROAP-213ENST00000550709 RPS10P46783 165 aaKnown RBP9.22□□□□□ -0.93
TROAP-213ENST00000550709 HBBP68871 147 aa9.22□□□□□ -0.93
TROAP-213ENST00000550709 IQCJQ1A5X6 159 aa9.22□□□□□ -0.93
TROAP-213ENST00000550709 MPV17L2Q567V2 206 aa9.22□□□□□ -0.93
TROAP-213ENST00000550709 MRAP2Q96G30 205 aa9.22□□□□□ -0.93
TROAP-213ENST00000550709 TMEM243Q9BU79 118 aa9.22□□□□□ -0.93
TROAP-213ENST00000550709 A0A1B0GW15 77 aa9.21□□□□□ -0.94
TROAP-213ENST00000550709 SDHAF1A6NFY7 115 aa9.21□□□□□ -0.94
TROAP-213ENST00000550709 FAM104BQ5XKR9 115 aa9.21□□□□□ -0.94
TROAP-213ENST00000550709 ATRAIDQ6UW56 229 aa9.21□□□□□ -0.94
TROAP-213ENST00000550709 Q8N976 141 aa9.21□□□□□ -0.94
TROAP-213ENST00000550709 UBE2WQ96B02 151 aa9.21□□□□□ -0.94
TROAP-213ENST00000550709 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.94
TROAP-213ENST00000550709 SEC11CQ9BY50 192 aa9.21□□□□□ -0.94
TROAP-213ENST00000550709 ST20Q9HBF5 79 aa9.21□□□□□ -0.94
TROAP-213ENST00000550709 HECTD4Q9Y4D8 3996 aa9.21□□□□□ -0.94
TROAP-213ENST00000550709 TRAV8-3A0A0A6YYJ7 113 aa9.2□□□□□ -0.94
TROAP-213ENST00000550709 A0A1B0GXF2 115 aa9.2□□□□□ -0.94
TROAP-213ENST00000550709 ANGP03950 147 aaKnown RBP9.2□□□□□ -0.94
TROAP-213ENST00000550709 S100A8P05109 93 aa9.2□□□□□ -0.94
TROAP-213ENST00000550709 PMCHP20382 165 aa9.2□□□□□ -0.94
TROAP-213ENST00000550709 AMTP48728 403 aa9.2□□□□□ -0.94
TROAP-213ENST00000550709 PKIAP61925 76 aa9.2□□□□□ -0.94
TROAP-213ENST00000550709 RBX1P62877 108 aa9.2□□□□□ -0.94
TROAP-213ENST00000550709 LAGE3Q14657 143 aa9.2□□□□□ -0.94
TROAP-213ENST00000550709 ELOBQ15370 118 aa9.2□□□□□ -0.94
TROAP-213ENST00000550709 MRPL51Q4U2R6 128 aaKnown RBP9.2□□□□□ -0.94
TROAP-213ENST00000550709 TRBV6-5A0A0K0K1A5 114 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms