RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, human

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE1B-206	ENST00000550285	NOTCH1	P46531	2555 aa		10.46	□□□□□ -0.74
PDE1B-206	ENST00000550285		F5H697	171 aa		10.46	□□□□□ -0.74
PDE1B-206	ENST00000550285	CHCHD1	Q96BP2	118 aa	Known RBP	10.46	□□□□□ -0.74
PDE1B-206	ENST00000550285	LAMTOR2	Q9Y2Q5	125 aa		10.46	□□□□□ -0.74
PDE1B-206	ENST00000550285	PAM16	Q9Y3D7	125 aa		10.46	□□□□□ -0.74
PDE1B-206	ENST00000550285	DEFB135	Q30KP9	77 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285	SUMO4	Q6EEV6	95 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285	POM121L12	Q8N7R1	296 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285	PRSS3P2	Q8NHM4	247 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285	NOP10	Q9NPE3	64 aa	Known RBP	10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285	RNF151	Q2KHN1	245 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285	RRN3P1	Q2M238	152 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285		Q6ZTI0	123 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285	MRAP2	Q96G30	205 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285	VPS25	Q9BRG1	176 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285	SPX	Q9BT56	116 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285		X6R8D5	127 aa		10.45	□□□□□ -0.74
PDE1B-206	ENST00000550285	TRGV1	A0A0A0MS02	117 aa		10.44	□□□□□ -0.74
PDE1B-206	ENST00000550285	OR4C5	Q8NGB2	326 aa		10.44	□□□□□ -0.74
PDE1B-206	ENST00000550285	EMP1	P54849	157 aa		10.43	□□□□□ -0.74
PDE1B-206	ENST00000550285	ZNF56	Q15929	161 aa		10.43	□□□□□ -0.74
PDE1B-206	ENST00000550285	CFAP126	Q5VTH2	177 aa		10.43	□□□□□ -0.74
PDE1B-206	ENST00000550285	SAMD5	Q5TGI4	173 aa		10.43	□□□□□ -0.74
PDE1B-206	ENST00000550285		Q6ZSN1	163 aa		10.43	□□□□□ -0.74
PDE1B-206	ENST00000550285	DEFB104A	Q8WTQ1	72 aa		10.43	□□□□□ -0.74
PDE1B-206	ENST00000550285	MRPS16	Q9Y3D3	137 aa	Known RBP	10.43	□□□□□ -0.74
PDE1B-206	ENST00000550285	NBEAL1	Q6ZS30	2694 aa		10.43	□□□□□ -0.74
PDE1B-206	ENST00000550285	IGHV1-24	A0A0C4DH33	117 aa		10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285	PRB2	P02812	416 aa	Predicted RBP	10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285	UFSP1	Q6NVU6	142 aa		10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285	KIR2DL5B	Q8NHK3	375 aa		10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285	C16orf74	Q96GX8	76 aa		10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285	MAP1LC3A	Q9H492	121 aa		10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285		Q9UF83	564 aa		10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285	APOC4	P55056	127 aa		10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285	OCIAD2	Q56VL3	154 aa		10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285	FA2H	Q7L5A8	372 aa		10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285	PTH2	Q96A98	100 aa		10.42	□□□□□ -0.74
PDE1B-206	ENST00000550285	IGLV2-18	A0A075B6J9	118 aa		10.41	□□□□□ -0.74
PDE1B-206	ENST00000550285		P0DMU3	169 aa		10.41	□□□□□ -0.74
PDE1B-206	ENST00000550285	FAM231A	P0DMU4	169 aa		10.41	□□□□□ -0.74
PDE1B-206	ENST00000550285	FAM231C	P0DMU5	169 aa		10.41	□□□□□ -0.74
PDE1B-206	ENST00000550285	IGLC3	P0DOY3	106 aa		10.41	□□□□□ -0.74
PDE1B-206	ENST00000550285		A8MWV9	139 aa		10.41	□□□□□ -0.74
PDE1B-206	ENST00000550285		M0QY20	66 aa		10.41	□□□□□ -0.74
PDE1B-206	ENST00000550285	DEFB4A	O15263	64 aa		10.41	□□□□□ -0.74
PDE1B-206	ENST00000550285	NEGR1	Q7Z3B1	354 aa		10.41	□□□□□ -0.74
PDE1B-206	ENST00000550285	AP5S1	Q9NUS5	200 aa		10.41	□□□□□ -0.74
PDE1B-206	ENST00000550285	IGHV3-53	P01767	116 aa		10.4	□□□□□ -0.74
PDE1B-206	ENST00000550285	HNRNPA3	P51991	378 aa	Known RBP	10.4	□□□□□ -0.74
PDE1B-206	ENST00000550285	DAZ2	Q13117	558 aa	Known RBP	10.4	□□□□□ -0.74
PDE1B-206	ENST00000550285	LINC00173	Q6ZV60	143 aa		10.4	□□□□□ -0.74
PDE1B-206	ENST00000550285	CST9L	Q9H4G1	147 aa		10.4	□□□□□ -0.74
PDE1B-206	ENST00000550285		A0A096LNJ9	63 aa		10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	GAGE12B	A1L429	117 aa		10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	RS1	O15537	224 aa		10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	GAGE7	O76087	117 aa		10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	GAGE12F	P0CL80	117 aa		10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	GAGE12G	P0CL81	117 aa		10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	GAGE12I	P0CL82	117 aa		10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	PIK3CD-AS1	Q5SR53	167 aa		10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	ZNF479	Q96JC4	524 aa		10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	SUMO2	P61956	95 aa	Known RBP	10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	OR11H2	Q8NH07	326 aa		10.39	□□□□□ -0.75
PDE1B-206	ENST00000550285	MGAM2	Q2M2H8	2515 aa		10.38	□□□□□ -0.75
PDE1B-206	ENST00000550285		K7ERU9	68 aa		10.38	□□□□□ -0.75
PDE1B-206	ENST00000550285	SPATA45	Q537H7	98 aa		10.38	□□□□□ -0.75
PDE1B-206	ENST00000550285		Q6ZN92	141 aa		10.38	□□□□□ -0.75
PDE1B-206	ENST00000550285		Q8N8P6	123 aa		10.38	□□□□□ -0.75
PDE1B-206	ENST00000550285	OVOL2	Q9BRP0	275 aa		10.38	□□□□□ -0.75
PDE1B-206	ENST00000550285	TMEM70	Q9BUB7	260 aa		10.38	□□□□□ -0.75
PDE1B-206	ENST00000550285	SMIM2	Q9BVW6	85 aa		10.38	□□□□□ -0.75
PDE1B-206	ENST00000550285	LEPROTL1	O95214	131 aa		10.37	□□□□□ -0.75
PDE1B-206	ENST00000550285	LGALS9B	Q3B8N2	356 aa		10.37	□□□□□ -0.75
PDE1B-206	ENST00000550285	RETN	Q9HD89	108 aa		10.37	□□□□□ -0.75
PDE1B-206	ENST00000550285	NXT2	Q9NPJ8	142 aa	Known RBP	10.37	□□□□□ -0.75
PDE1B-206	ENST00000550285	RNF183	Q96D59	192 aa		10.36	□□□□□ -0.75
PDE1B-206	ENST00000550285	C20orf78	Q9BR46	151 aa		10.36	□□□□□ -0.75
PDE1B-206	ENST00000550285	ST20	Q9HBF5	79 aa		10.36	□□□□□ -0.75
PDE1B-206	ENST00000550285	DNHD1	Q96M86	4753 aa		10.36	□□□□□ -0.75
PDE1B-206	ENST00000550285	IGHV4-28	A0A0C4DH34	117 aa		10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285	LINC01546	A6NGU7	62 aa		10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285	TRGV2	A0A075B6R0	118 aa		10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285	SDHAF1	A6NFY7	115 aa		10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285	SMIM9	A6NGZ8	99 aa		10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285		A8MZ25	164 aa		10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285	SYS1-DBNDD2	H3BUS1	97 aa		10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285	DEFB130B	P0DP73	79 aa		10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285	DEFB130A	P0DP74	79 aa		10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285	POLR2K	P53803	58 aa	Known RBP	10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285	RIPPLY3	P57055	190 aa		10.35	□□□□□ -0.75
PDE1B-206	ENST00000550285	SPATA12	Q7Z6I5	190 aa		10.34	□□□□□ -0.75
PDE1B-206	ENST00000550285	TRAV9-2	A0A087WT02	112 aa		10.34	□□□□□ -0.75
PDE1B-206	ENST00000550285	TRAV4	A0A0B4J268	109 aa		10.34	□□□□□ -0.75
PDE1B-206	ENST00000550285	ATOH7	Q8N100	152 aa		10.34	□□□□□ -0.75
PDE1B-206	ENST00000550285		Q8NAQ8	132 aa		10.34	□□□□□ -0.75
PDE1B-206	ENST00000550285	HSPB8	Q9UJY1	196 aa		10.34	□□□□□ -0.75
PDE1B-206	ENST00000550285	TRBV6-5	A0A0K0K1A5	114 aa		10.33	□□□□□ -0.76
PDE1B-206	ENST00000550285	RHOD	O00212	210 aa		10.33	□□□□□ -0.76
PDE1B-206	ENST00000550285	PPP1R17	O96001	155 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms