RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 PLA2G1BP04054 148 aaKnown RBP7.18□□□□□ -1.26
VTI1BP3-201ENST00000550220 CACNG7P62955 275 aa7.18□□□□□ -1.26
VTI1BP3-201ENST00000550220 NEXN-AS1Q8NBZ9 246 aa7.18□□□□□ -1.26
VTI1BP3-201ENST00000550220 DNAJC30Q96LL9 226 aa7.18□□□□□ -1.26
VTI1BP3-201ENST00000550220 C1orf43Q9BWL3 253 aa7.18□□□□□ -1.26
VTI1BP3-201ENST00000550220 F2Z2F3 143 aa7.17□□□□□ -1.26
VTI1BP3-201ENST00000550220 LECT2O14960 151 aa7.17□□□□□ -1.26
VTI1BP3-201ENST00000550220 TAGLN2P37802 199 aaKnown RBP7.17□□□□□ -1.26
VTI1BP3-201ENST00000550220 GNG4P50150 75 aa7.17□□□□□ -1.26
VTI1BP3-201ENST00000550220 CCL20P78556 96 aa7.17□□□□□ -1.26
VTI1BP3-201ENST00000550220 Q6ZSA8 131 aa7.17□□□□□ -1.26
VTI1BP3-201ENST00000550220 CHCHD5Q9BSY4 110 aa7.17□□□□□ -1.26
VTI1BP3-201ENST00000550220 VAX2Q9UIW0 290 aa7.17□□□□□ -1.26
VTI1BP3-201ENST00000550220 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.16□□□□□ -1.26
VTI1BP3-201ENST00000550220 SULT1A2P50226 295 aa7.16□□□□□ -1.26
VTI1BP3-201ENST00000550220 MEF2BQ02080 365 aaPredicted RBP7.16□□□□□ -1.26
VTI1BP3-201ENST00000550220 WFDC2Q14508 124 aa7.16□□□□□ -1.26
VTI1BP3-201ENST00000550220 MIAQ16674 131 aa7.16□□□□□ -1.26
VTI1BP3-201ENST00000550220 CENPWQ5EE01 88 aa7.16□□□□□ -1.26
VTI1BP3-201ENST00000550220 FER1L6-AS1Q8NA97 138 aa7.16□□□□□ -1.26
VTI1BP3-201ENST00000550220 FAM30AQ9NZY2 134 aa7.16□□□□□ -1.26
VTI1BP3-201ENST00000550220 KIF25-AS1Q9Y6Z4 181 aa7.16□□□□□ -1.26
VTI1BP3-201ENST00000550220 DMBT1Q9UGM3 2413 aaPredicted RBP7.15□□□□□ -1.26
VTI1BP3-201ENST00000550220 TRBV25-1A0A075B6N4 114 aa7.15□□□□□ -1.26
VTI1BP3-201ENST00000550220 P01737 135 aa7.15□□□□□ -1.26
VTI1BP3-201ENST00000550220 ANGP03950 147 aaKnown RBP7.15□□□□□ -1.26
VTI1BP3-201ENST00000550220 TCTE3Q8IZS6 198 aa7.15□□□□□ -1.26
VTI1BP3-201ENST00000550220 C15orf54Q8N8G6 183 aa7.15□□□□□ -1.26
VTI1BP3-201ENST00000550220 OR2D3Q8NGH3 330 aa7.15□□□□□ -1.26
VTI1BP3-201ENST00000550220 DERL1Q9BUN8 251 aa7.15□□□□□ -1.26
VTI1BP3-201ENST00000550220 MED9Q9NWA0 146 aa7.15□□□□□ -1.26
VTI1BP3-201ENST00000550220 VPS13BQ7Z7G8 4022 aa7.15□□□□□ -1.26
VTI1BP3-201ENST00000550220 FAT1Q14517 4588 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 MUC21A0A0G2JKD1 596 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 MUC21A0A140T8X8 626 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 C19orf71A6NCJ1 209 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 TRGC1P0CF51 173 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 IGLC6P0CF74 106 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 SSTP61278 116 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 MPV17L2Q567V2 206 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 C4orf48Q5BLP8 95 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 WDR73Q6P4I2 378 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 ENHOQ6UWT2 76 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 SLC51BQ86UW2 128 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 TPPP3Q9BW30 176 aa7.14□□□□□ -1.27
VTI1BP3-201ENST00000550220 IGHV1-24A0A0C4DH33 117 aa7.13□□□□□ -1.27
VTI1BP3-201ENST00000550220 M0QY20 66 aa7.13□□□□□ -1.27
VTI1BP3-201ENST00000550220 IGLV2-8P01709 118 aa7.13□□□□□ -1.27
VTI1BP3-201ENST00000550220 BCL2P10415 239 aa7.13□□□□□ -1.27
VTI1BP3-201ENST00000550220 HAMPP81172 84 aa7.13□□□□□ -1.27
VTI1BP3-201ENST00000550220 IQCJQ1A5X6 159 aa7.13□□□□□ -1.27
VTI1BP3-201ENST00000550220 C9orf62Q8N4C0 152 aa7.13□□□□□ -1.27
VTI1BP3-201ENST00000550220 RAB19A4D1S5 217 aa7.12□□□□□ -1.27
VTI1BP3-201ENST00000550220 J3QL48 77 aa7.12□□□□□ -1.27
VTI1BP3-201ENST00000550220 MGPP08493 103 aa7.12□□□□□ -1.27
VTI1BP3-201ENST00000550220 DGAT2L7PQ6IED9 249 aa7.12□□□□□ -1.27
VTI1BP3-201ENST00000550220 RASL11AQ6T310 242 aa7.12□□□□□ -1.27
VTI1BP3-201ENST00000550220 LINC00528Q8N1L1 170 aa7.12□□□□□ -1.27
VTI1BP3-201ENST00000550220 DEFB104AQ8WTQ1 72 aa7.12□□□□□ -1.27
VTI1BP3-201ENST00000550220 CHAC1Q9BUX1 264 aa7.12□□□□□ -1.27
VTI1BP3-201ENST00000550220 PRR34Q9NV39 138 aa7.12□□□□□ -1.27
VTI1BP3-201ENST00000550220 A0A1B0GUV1 79 aa7.11□□□□□ -1.27
VTI1BP3-201ENST00000550220 GZMBP10144 247 aa7.11□□□□□ -1.27
VTI1BP3-201ENST00000550220 RBX1P62877 108 aa7.11□□□□□ -1.27
VTI1BP3-201ENST00000550220 NTM-AS1Q6ZSK4 140 aa7.11□□□□□ -1.27
VTI1BP3-201ENST00000550220 CLRN3Q8NCR9 226 aa7.11□□□□□ -1.27
VTI1BP3-201ENST00000550220 DPH3P1Q9H4G8 78 aa7.11□□□□□ -1.27
VTI1BP3-201ENST00000550220 NIT2Q9NQR4 276 aa7.11□□□□□ -1.27
VTI1BP3-201ENST00000550220 FLG2Q5D862 2391 aaPredicted RBP7.11□□□□□ -1.27
VTI1BP3-201ENST00000550220 TRAV8-4A0A0B4J246 113 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 NTF3P20783 257 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 GAGE6Q13070 117 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 SUMO4Q6EEV6 95 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 LYZL1Q6UWQ5 148 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 SCXQ7RTU7 201 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 SMIM15Q7Z3B0 74 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 LINC00269Q8N2A0 174 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 NUDT10Q8NFP7 164 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 NUDT11Q96G61 164 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 PGLYRP4Q96LB8 373 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 DNAH8Q96JB1 4490 aa7.1□□□□□ -1.27
VTI1BP3-201ENST00000550220 USP17L23D6RBM5 183 aa7.09□□□□□ -1.27
VTI1BP3-201ENST00000550220 NKX2-5P52952 324 aaPredicted RBP7.09□□□□□ -1.27
VTI1BP3-201ENST00000550220 BLOC1S1P78537 153 aa7.09□□□□□ -1.27
VTI1BP3-201ENST00000550220 REG3AQ06141 175 aa7.09□□□□□ -1.27
VTI1BP3-201ENST00000550220 TMEM243Q9BU79 118 aa7.09□□□□□ -1.27
VTI1BP3-201ENST00000550220 CNFNQ9BYD5 112 aa7.09□□□□□ -1.27
VTI1BP3-201ENST00000550220 SRRM2Q9UQ35 2752 aaKnown RBP7.09□□□□□ -1.27
VTI1BP3-201ENST00000550220 TRBV20OR9-2A0A075B6H5 130 aa7.08□□□□□ -1.28
VTI1BP3-201ENST00000550220 UBE2L6O14933 153 aa7.08□□□□□ -1.28
VTI1BP3-201ENST00000550220 HLA-DQA1P01909 254 aa7.08□□□□□ -1.28
VTI1BP3-201ENST00000550220 CTRLP40313 264 aa7.08□□□□□ -1.28
VTI1BP3-201ENST00000550220 COTL1Q14019 142 aa7.08□□□□□ -1.28
VTI1BP3-201ENST00000550220 TWIST1Q15672 202 aa7.08□□□□□ -1.28
VTI1BP3-201ENST00000550220 LINC01620Q4KN68 170 aa7.08□□□□□ -1.28
VTI1BP3-201ENST00000550220 TEX261Q6UWH6 196 aa7.08□□□□□ -1.28
VTI1BP3-201ENST00000550220 RPP21Q9H633 154 aaKnown RBP7.08□□□□□ -1.28
VTI1BP3-201ENST00000550220 TMEM250H0YL14 139 aa7.07□□□□□ -1.28
VTI1BP3-201ENST00000550220 LCE2BO14633 110 aa7.07□□□□□ -1.28
VTI1BP3-201ENST00000550220 OCC1Q8TAD7 63 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms