RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 K7EP34 96 aa11.36□□□□□ -0.59
CUX1-214ENST00000550008 GAS8-AS1O95177 125 aa11.36□□□□□ -0.59
CUX1-214ENST00000550008 TRBV6-1A0A0K0K1D8 114 aa11.36□□□□□ -0.59
CUX1-214ENST00000550008 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
CUX1-214ENST00000550008 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 IGHV4-31P0DP07 118 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 CLPSL2Q6UWE3 100 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 GATD1Q8NB37 220 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 OPRPNQ99935 248 aaPredicted RBP11.35□□□□□ -0.59
CUX1-214ENST00000550008 A0A0J9YX75 114 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 A0A0J9YXV3 536 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 EDN2P20800 178 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 COPS9Q8WXC6 57 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 TMEM141Q96I45 108 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 ESM1Q9NQ30 184 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 C11orf21Q9P2W6 132 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 LINC00310P59036 64 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
CUX1-214ENST00000550008 J3QQQ9 107 aa11.34□□□□□ -0.59
CUX1-214ENST00000550008 C6orf226Q5I0X4 101 aa11.34□□□□□ -0.59
CUX1-214ENST00000550008 F5H768 121 aa11.34□□□□□ -0.59
CUX1-214ENST00000550008 PAX4O43316 350 aa11.34□□□□□ -0.59
CUX1-214ENST00000550008 MYO15AQ9UKN7 3530 aa11.34□□□□□ -0.59
CUX1-214ENST00000550008 P0DMU3 169 aa11.33□□□□□ -0.6
CUX1-214ENST00000550008 FAM231AP0DMU4 169 aa11.33□□□□□ -0.6
CUX1-214ENST00000550008 FAM231CP0DMU5 169 aa11.33□□□□□ -0.6
CUX1-214ENST00000550008 MORN3Q6PF18 240 aaPredicted RBP11.33□□□□□ -0.6
CUX1-214ENST00000550008 SPAG8Q99932 426 aaPredicted RBP11.33□□□□□ -0.6
CUX1-214ENST00000550008 SCRT2Q9NQ03 307 aa11.33□□□□□ -0.6
CUX1-214ENST00000550008 NDUFA12Q9UI09 145 aa11.33□□□□□ -0.6
CUX1-214ENST00000550008 PRM2P04554 102 aa11.33□□□□□ -0.6
CUX1-214ENST00000550008 DEFB125Q8N687 156 aa11.33□□□□□ -0.6
CUX1-214ENST00000550008 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
CUX1-214ENST00000550008 C3orf56Q8N813 242 aa11.33□□□□□ -0.6
CUX1-214ENST00000550008 PRR9Q5T870 116 aa11.32□□□□□ -0.6
CUX1-214ENST00000550008 C18orf65Q6ZTR6 163 aa11.32□□□□□ -0.6
CUX1-214ENST00000550008 RASL10AQ92737 203 aa11.32□□□□□ -0.6
CUX1-214ENST00000550008 DNAJC9-AS1A6NH13 148 aa11.32□□□□□ -0.6
CUX1-214ENST00000550008 H3BMG7 143 aa11.32□□□□□ -0.6
CUX1-214ENST00000550008 PFN2P35080 140 aa11.32□□□□□ -0.6
CUX1-214ENST00000550008 MRGPRG-AS1Q2M3A8 158 aa11.32□□□□□ -0.6
CUX1-214ENST00000550008 ZFAND2AQ8N6M9 145 aa11.32□□□□□ -0.6
CUX1-214ENST00000550008 A0A0J9YY99 117 aa11.32□□□□□ -0.6
CUX1-214ENST00000550008 ODF1Q14990 250 aa11.31□□□□□ -0.6
CUX1-214ENST00000550008 FXYD2P54710 66 aa11.31□□□□□ -0.6
CUX1-214ENST00000550008 CEMP1Q6PRD7 247 aaPredicted RBP11.31□□□□□ -0.6
CUX1-214ENST00000550008 TRAV8-4A0A0B4J246 113 aa11.31□□□□□ -0.6
CUX1-214ENST00000550008 A0A1W2PPM0 123 aa11.31□□□□□ -0.6
CUX1-214ENST00000550008 SPTBN5Q9NRC6 3674 aaKnown RBP11.31□□□□□ -0.6
CUX1-214ENST00000550008 F8W735 103 aaPredicted RBP11.3□□□□□ -0.6
CUX1-214ENST00000550008 CEND1Q8N111 149 aa11.3□□□□□ -0.6
CUX1-214ENST00000550008 AGRNO00468 2067 aa11.3□□□□□ -0.6
CUX1-214ENST00000550008 CLPSL1A2RUU4 121 aa11.3□□□□□ -0.6
CUX1-214ENST00000550008 DEFB4AO15263 64 aa11.3□□□□□ -0.6
CUX1-214ENST00000550008 TEX48A0A1B0GUV7 120 aa11.3□□□□□ -0.6
CUX1-214ENST00000550008 C9JAW5 83 aa11.3□□□□□ -0.6
CUX1-214ENST00000550008 TMEM243Q9BU79 118 aa11.3□□□□□ -0.6
CUX1-214ENST00000550008 TNRC6BQ9UPQ9 1833 aaKnown RBP11.3□□□□□ -0.6
CUX1-214ENST00000550008 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
CUX1-214ENST00000550008 DAD1P61803 113 aa11.29□□□□□ -0.6
CUX1-214ENST00000550008 PRSS47A8MTI9 375 aa11.28□□□□□ -0.6
CUX1-214ENST00000550008 CRPP02741 224 aa11.28□□□□□ -0.6
CUX1-214ENST00000550008 Q6YL49 198 aa11.28□□□□□ -0.6
CUX1-214ENST00000550008 TRAV8-3A0A0A6YYJ7 113 aa11.28□□□□□ -0.6
CUX1-214ENST00000550008 K7EQG2 157 aa11.28□□□□□ -0.6
CUX1-214ENST00000550008 RBX1P62877 108 aa11.28□□□□□ -0.6
CUX1-214ENST00000550008 C12orf74Q32Q52 190 aa11.28□□□□□ -0.6
CUX1-214ENST00000550008 BAALCQ8WXS3 180 aa11.28□□□□□ -0.6
CUX1-214ENST00000550008 SS18L2Q9UHA2 77 aa11.28□□□□□ -0.6
CUX1-214ENST00000550008 C11orf86A6NJI1 115 aa11.27□□□□□ -0.6
CUX1-214ENST00000550008 B5MCH6 92 aa11.27□□□□□ -0.61
CUX1-214ENST00000550008 NXPH4O95158 308 aa11.27□□□□□ -0.61
CUX1-214ENST00000550008 F8W1H4 67 aa11.27□□□□□ -0.61
CUX1-214ENST00000550008 MRPS12O15235 138 aaKnown RBP11.26□□□□□ -0.61
CUX1-214ENST00000550008 DPH3Q96FX2 82 aa11.26□□□□□ -0.61
CUX1-214ENST00000550008 RNF185Q96GF1 192 aa11.26□□□□□ -0.61
CUX1-214ENST00000550008 PTPRBP23467 1997 aa11.26□□□□□ -0.61
CUX1-214ENST00000550008 SPATA12Q7Z6I5 190 aa11.26□□□□□ -0.61
CUX1-214ENST00000550008 MAP6D1Q9H9H5 199 aa11.26□□□□□ -0.61
CUX1-214ENST00000550008 TAX1BP3O14907 124 aa11.25□□□□□ -0.61
CUX1-214ENST00000550008 PSMB8P28062 276 aa11.25□□□□□ -0.61
CUX1-214ENST00000550008 Q6ZSV7 163 aa11.25□□□□□ -0.61
CUX1-214ENST00000550008 RHOHQ15669 191 aa11.25□□□□□ -0.61
CUX1-214ENST00000550008 FGF6P10767 208 aa11.24□□□□□ -0.61
CUX1-214ENST00000550008 TMEM86BQ8N661 226 aa11.24□□□□□ -0.61
CUX1-214ENST00000550008 USP24Q9UPU5 2620 aa11.24□□□□□ -0.61
CUX1-214ENST00000550008 PROK1P58294 105 aa11.24□□□□□ -0.61
CUX1-214ENST00000550008 DAND5Q8N907 189 aa11.24□□□□□ -0.61
CUX1-214ENST00000550008 C5orf38Q86SI9 138 aa11.24□□□□□ -0.61
CUX1-214ENST00000550008 BOD1L2Q8IYS8 172 aa11.24□□□□□ -0.61
CUX1-214ENST00000550008 BBC3Q96PG8 261 aaPredicted RBP11.23□□□□□ -0.61
CUX1-214ENST00000550008 IGKV2D-26A0A0A0MRZ7 120 aa11.23□□□□□ -0.61
CUX1-214ENST00000550008 C2orf82Q6UX34 121 aa11.23□□□□□ -0.61
CUX1-214ENST00000550008 SH2D6Q7Z4S9 175 aa11.23□□□□□ -0.61
CUX1-214ENST00000550008 C4orf3Q8WVX3 66 aa11.23□□□□□ -0.61
CUX1-214ENST00000550008 TRAV26-1A0A087WT03 109 aa11.23□□□□□ -0.61
CUX1-214ENST00000550008 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
CUX1-214ENST00000550008 RBMY1BA6NDE4 496 aaKnown RBP11.23□□□□□ -0.61
CUX1-214ENST00000550008 RBMY1EA6NEQ0 496 aaKnown RBP11.23□□□□□ -0.61
CUX1-214ENST00000550008 H3BMM0 161 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms