RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 MRAP2Q96G30 205 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 ZNF479Q96JC4 524 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 TM2D3Q9BRN9 247 aa5.75□□□□□ -1.49
DEPDC4-207ENST00000549249 PRKDCP78527 4128 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 TRAV4A0A0B4J268 109 aa5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 SMIM17P0DL12 118 aa5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 CKS2P33552 79 aa5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 NDUFA6P56556 154 aa5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 Q0VG73 95 aa5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 ZNF56Q15929 161 aa5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 FAM222AQ5U5X8 452 aa5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 RPL39LQ96EH5 51 aaKnown RBP5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 URB1-AS1Q96HZ7 61 aa5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 PRELID3AQ96N28 172 aa5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 DKK2Q9UBU2 259 aa5.74□□□□□ -1.49
DEPDC4-207ENST00000549249 LYRM9A8MSI8 78 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 M0QY20 66 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 RHODO00212 210 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 NUPR1O60356 82 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 TNFRSF6BO95407 300 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 IGHV3-53P01767 116 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 PPBPP02775 128 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 P0DMU3 169 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 FAM231AP0DMU4 169 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 FAM231CP0DMU5 169 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 OR10J3Q5JRS4 329 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 COA6Q5JTJ3 125 aaKnown RBP5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 OR4C5Q8NGB2 326 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 C18orf15Q96N68 181 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 EDA2RQ9HAV5 297 aa5.73□□□□□ -1.49
DEPDC4-207ENST00000549249 IGLV2-18A0A075B6J9 118 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 TRGV2A0A075B6R0 118 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 C5orf52A6NGY3 159 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 F5H697 171 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 SERF1AO75920 110 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 DEFB130BP0DP73 79 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 DEFB130AP0DP74 79 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 ZFP2Q6ZN57 461 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 SPATA25Q9BR10 227 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 C11orf68Q9H3H3 251 aaKnown RBP5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 Q9UF83 564 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 LAMTOR2Q9Y2Q5 125 aa5.72□□□□□ -1.49
DEPDC4-207ENST00000549249 PRSS47A8MTI9 375 aa5.71□□□□□ -1.5
DEPDC4-207ENST00000549249 S100A6P06703 90 aa5.71□□□□□ -1.5
DEPDC4-207ENST00000549249 HOXA5P20719 270 aa5.71□□□□□ -1.5
DEPDC4-207ENST00000549249 SNRPEP62304 92 aaKnown RBP5.71□□□□□ -1.5
DEPDC4-207ENST00000549249 FHL2Q14192 279 aa5.71□□□□□ -1.5
DEPDC4-207ENST00000549249 B9D2Q9BPU9 175 aa5.71□□□□□ -1.5
DEPDC4-207ENST00000549249 MAP1LC3AQ9H492 121 aa5.71□□□□□ -1.5
DEPDC4-207ENST00000549249 HUWE1Q7Z6Z7 4374 aaKnown RBP5.71□□□□□ -1.5
DEPDC4-207ENST00000549249 A0A0J9YWU9 116 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 TRBV6-5A0A0K0K1A5 114 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 LOC389332A0A1B0GUA5 103 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 IFITM10A6NMD0 228 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 SPART-AS1P0CW21 52 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 IFI27P40305 119 aaPredicted RBP5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 DAD1P61803 113 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 NIT1Q86X76 327 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 BAGE3Q86Y29 109 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 HIST3H2BBQ8N257 126 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 NEXN-AS1Q8NBZ9 246 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 SMIM2Q9BVW6 85 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
DEPDC4-207ENST00000549249 LOC100131303A0A0U1RQF7 123 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 LINC01546A6NGU7 62 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 K7EQD1 137 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 CIDEAO60543 219 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 ESDP10768 282 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 POLR2KP53803 58 aaKnown RBP5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 SUMO2P61956 95 aaKnown RBP5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 C12orf74Q32Q52 190 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 PDZD11Q5EBL8 140 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 RNASEKQ6P5S7 137 aaKnown RBP5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 NEGR1Q7Z3B1 354 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 SLC25A29Q8N8R3 303 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 C20orf78Q9BR46 151 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 TMEM70Q9BUB7 260 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 NIT2Q9NQR4 276 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 NBEAL2Q6ZNJ1 2754 aa5.69□□□□□ -1.5
DEPDC4-207ENST00000549249 A0A096LNJ9 63 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 TRGV4A0A0C4DH28 118 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 TEX48A0A1B0GUV7 120 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 LOC105371267A0A1B0GV96 52 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 SDHAF1A6NFY7 115 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 H7C1H1 209 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 PPP1R17O96001 155 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 LINC00614P0C842 121 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 LINC00694P0DN24 101 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 RPL32P62910 135 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 Q8N8P6 123 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 PRSS3P2Q8NHM4 247 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 ST20Q9HBF5 79 aa5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 NXT2Q9NPJ8 142 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-207ENST00000549249 TENM3Q9P273 2699 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 TRBV27A0A0K0K1C4 114 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 TRBV6-4A0A1B0GX49 114 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 TCAPO15273 167 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 ATP5G1P05496 136 aa5.67□□□□□ -1.5
DEPDC4-207ENST00000549249 CRYBA4P53673 196 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms