RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TRBV7-9A0A0J9YWB2 115 aa10.22□□□□□ -0.77
HDAC7-228ENST00000548938 TMEM263Q8WUH6 116 aaKnown RBP10.22□□□□□ -0.77
HDAC7-228ENST00000548938 BBC3Q96PG8 261 aaPredicted RBP10.22□□□□□ -0.77
HDAC7-228ENST00000548938 ELANEP08246 267 aa10.21□□□□□ -0.77
HDAC7-228ENST00000548938 BRD3OSQ6XYD6 125 aa10.21□□□□□ -0.77
HDAC7-228ENST00000548938 TMEM223A0PJW6 202 aa10.21□□□□□ -0.78
HDAC7-228ENST00000548938 LGALS9O00182 355 aa10.21□□□□□ -0.78
HDAC7-228ENST00000548938 ZNF580Q9UK33 172 aa10.21□□□□□ -0.78
HDAC7-228ENST00000548938 LEPROTO15243 131 aa10.2□□□□□ -0.78
HDAC7-228ENST00000548938 MUSTN1Q8IVN3 82 aa10.2□□□□□ -0.78
HDAC7-228ENST00000548938 ANAPC13Q9BS18 74 aa10.2□□□□□ -0.78
HDAC7-228ENST00000548938 TRBV6-5A0A0K0K1A5 114 aa10.2□□□□□ -0.78
HDAC7-228ENST00000548938 ZNF56Q15929 161 aa10.2□□□□□ -0.78
HDAC7-228ENST00000548938 TMEM262E9PQX1 116 aa10.2□□□□□ -0.78
HDAC7-228ENST00000548938 PF4V1P10720 104 aa10.2□□□□□ -0.78
HDAC7-228ENST00000548938 ZNF22P17026 224 aaPredicted RBP10.2□□□□□ -0.78
HDAC7-228ENST00000548938 LY6EQ16553 131 aa10.2□□□□□ -0.78
HDAC7-228ENST00000548938 ZFAND6Q6FIF0 208 aa10.2□□□□□ -0.78
HDAC7-228ENST00000548938 ABCA2Q9BZC7 2435 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 CITED1Q99966 193 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 A0A0B4J2C4 111 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 M0QY20 66 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 BRI3O95415 125 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 P0DMU3 169 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 FAM231AP0DMU4 169 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 FAM231CP0DMU5 169 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 Q1RN00 199 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 NSUN5P1Q3KNT7 163 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 TEX29Q8N6K0 151 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 NTN5Q8WTR8 489 aaPredicted RBP10.19□□□□□ -0.78
HDAC7-228ENST00000548938 FAM110AQ9BQ89 295 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 MDFICQ9P1T7 246 aa10.19□□□□□ -0.78
HDAC7-228ENST00000548938 LRRK2Q5S007 2527 aa10.18□□□□□ -0.78
HDAC7-228ENST00000548938 A0A0J9YXV3 536 aa10.18□□□□□ -0.78
HDAC7-228ENST00000548938 IGHV1-69P01742 117 aa10.18□□□□□ -0.78
HDAC7-228ENST00000548938 HERV-K104P63124 156 aa10.18□□□□□ -0.78
HDAC7-228ENST00000548938 FAM208BQ5VWN6 2430 aa10.18□□□□□ -0.78
HDAC7-228ENST00000548938 RHODO00212 210 aa10.18□□□□□ -0.78
HDAC7-228ENST00000548938 DAZ1Q9NQZ3 744 aaKnown RBP10.18□□□□□ -0.78
HDAC7-228ENST00000548938 UTP20O75691 2785 aaKnown RBP10.17□□□□□ -0.78
HDAC7-228ENST00000548938 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
HDAC7-228ENST00000548938 IGHV3-16A0A0C4DH30 117 aa10.17□□□□□ -0.78
HDAC7-228ENST00000548938 IGKV3-20P01619 116 aa10.17□□□□□ -0.78
HDAC7-228ENST00000548938 USMG5Q96IX5 58 aa10.17□□□□□ -0.78
HDAC7-228ENST00000548938 C9orf85Q96MD7 179 aa10.17□□□□□ -0.78
HDAC7-228ENST00000548938 ADARB2-AS1A8MUL3 147 aa10.17□□□□□ -0.78
HDAC7-228ENST00000548938 IGHV4-39P01824 125 aa10.17□□□□□ -0.78
HDAC7-228ENST00000548938 RHOHQ15669 191 aa10.17□□□□□ -0.78
HDAC7-228ENST00000548938 BEX4Q9NWD9 120 aaPredicted RBP10.17□□□□□ -0.78
HDAC7-228ENST00000548938 M0QXV9 152 aa10.16□□□□□ -0.78
HDAC7-228ENST00000548938 LINC01620Q4KN68 170 aa10.16□□□□□ -0.78
HDAC7-228ENST00000548938 C20orf203Q8NBC4 194 aa10.16□□□□□ -0.78
HDAC7-228ENST00000548938 Q8N1Y9 231 aa10.16□□□□□ -0.78
HDAC7-228ENST00000548938 DCANP1Q8TF63 244 aa10.16□□□□□ -0.78
HDAC7-228ENST00000548938 IGLV4-3A0A075B6K6 122 aa10.15□□□□□ -0.78
HDAC7-228ENST00000548938 A0A0J9YXY3 114 aa10.15□□□□□ -0.78
HDAC7-228ENST00000548938 M0R2P5 195 aa10.15□□□□□ -0.78
HDAC7-228ENST00000548938 CRLF1O75462 422 aa10.15□□□□□ -0.78
HDAC7-228ENST00000548938 CRYBG3Q68DQ2 2970 aa10.15□□□□□ -0.78
HDAC7-228ENST00000548938 TRAV4A0A0B4J268 109 aa10.15□□□□□ -0.78
HDAC7-228ENST00000548938 NHLRC4P0CG21 123 aaPredicted RBP10.15□□□□□ -0.78
HDAC7-228ENST00000548938 BLCAPP62952 87 aa10.15□□□□□ -0.78
HDAC7-228ENST00000548938 ZNF843Q8N446 348 aa10.15□□□□□ -0.78
HDAC7-228ENST00000548938 SS18L2Q9UHA2 77 aa10.15□□□□□ -0.78
HDAC7-228ENST00000548938 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.14□□□□□ -0.79
HDAC7-228ENST00000548938 TEX49A0A1B0GTD5 131 aa10.14□□□□□ -0.79
HDAC7-228ENST00000548938 TRIAP1O43715 76 aa10.14□□□□□ -0.79
HDAC7-228ENST00000548938 IGHG2P01859 326 aa10.14□□□□□ -0.79
HDAC7-228ENST00000548938 ATXN8Q156A1 80 aa10.14□□□□□ -0.79
HDAC7-228ENST00000548938 ID1P41134 155 aa10.14□□□□□ -0.79
HDAC7-228ENST00000548938 H3BUA1 57 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 CCL19Q99731 98 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 A0A0J9YX75 114 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 H3BUX3 64 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 SNCGO76070 127 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 TNFRSF18Q9Y5U5 241 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 CSMD2Q7Z408 3487 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 IGHV3-30-3P0DP02 117 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 IGHV4-38-2P0DP08 117 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 GAGE2BQ13066 116 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 GAGE2EQ4V326 116 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 LITAFQ99732 161 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 SPXQ9BT56 116 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 GAGE2DQ9UEU5 116 aa10.13□□□□□ -0.79
HDAC7-228ENST00000548938 I3L3M4 83 aa10.12□□□□□ -0.79
HDAC7-228ENST00000548938 UBR5O95071 2799 aaPredicted RBP10.12□□□□□ -0.79
HDAC7-228ENST00000548938 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
HDAC7-228ENST00000548938 GAGE5Q13069 117 aa10.12□□□□□ -0.79
HDAC7-228ENST00000548938 GAGE6Q13070 117 aa10.12□□□□□ -0.79
HDAC7-228ENST00000548938 CELSR2Q9HCU4 2923 aa10.11□□□□□ -0.79
HDAC7-228ENST00000548938 B5MCH6 92 aa10.11□□□□□ -0.79
HDAC7-228ENST00000548938 SPINK13Q1W4C9 94 aa10.11□□□□□ -0.79
HDAC7-228ENST00000548938 TIMM21Q9BVV7 248 aa10.11□□□□□ -0.79
HDAC7-228ENST00000548938 TRBV10-2A0A0K0K1G8 114 aa10.11□□□□□ -0.79
HDAC7-228ENST00000548938 IGLV1-40P01703 118 aa10.11□□□□□ -0.79
HDAC7-228ENST00000548938 PRSS2P07478 247 aa10.11□□□□□ -0.79
HDAC7-228ENST00000548938 NDUFV3P56181 108 aaKnown RBP10.11□□□□□ -0.79
HDAC7-228ENST00000548938 ODF3Q96PU9 254 aa10.11□□□□□ -0.79
HDAC7-228ENST00000548938 CENPEQ02224 2701 aa10.1□□□□□ -0.79
HDAC7-228ENST00000548938 IGHV1OR15-1A0A075B7D0 117 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms