RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 TRAV6A0A075B6T7 132 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 GVQW2A0A096LPI5 108 aaPredicted RBP1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 TRBV6-8A0A0A6YYG3 113 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 TRAV8-4A0A0B4J246 113 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 LOC107984640A0A0U1RRK4 108 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 IFITM5A6NNB3 132 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 H3BQ15 152 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 M0R3E3 92 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 P01737 135 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 PMP2P02689 132 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 MT1FP04733 61 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 TYMSP04818 313 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 OR5G3P0C626 314 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 IGLC2P0DOY2 106 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 LGALS3P17931 250 aaKnown RBP1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 RAB5CP51148 216 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 ATP5IP56385 69 aaPredicted RBP1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 PLP1P60201 277 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 RAB2AP61019 212 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 PKIAP61925 76 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 RBX1P62877 108 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 ZNF266Q14584 549 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 TMEM78Q5T7P6 136 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 Q5W150 140 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 Q6AWC8 147 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 LPCAT3Q6P1A2 487 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 PATE2Q6UY27 113 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 TMEM91Q6ZNR0 172 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 S100A7AQ86SG5 101 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 OR13C8Q8NGS7 320 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 OR2T35Q8NGX2 323 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 RNASE11Q8TAA1 199 aaKnown RBP1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 PTH2Q96A98 100 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 YIPF6Q96EC8 236 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 TP53RKQ96S44 253 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 ATP5SQ99766 215 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 ZNF492Q9P255 531 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 NAGKQ9UJ70 344 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 ORC6Q9Y5N6 252 aa1.1□□□□□ -2.23
DEPDC4-204ENST00000547823 IGKV2-40A0A087WW87 121 aaPredicted RBP1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 C3orf85A0A1B0GTC6 90 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 MYL12BO14950 172 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 ARL6IP5O75915 188 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 SCGNO76038 276 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 PTTG1O95997 202 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 IGKV2D-40P01614 121 aaPredicted RBP1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 IL5P05113 134 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 LINC00869P0C866 280 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 HIST1H1EP10412 219 aaKnown RBP1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 FGF6P10767 208 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 SPRR2DP22532 72 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 TAS2R46P59540 309 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 UBE2D3P61077 147 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 UBE2D2P62837 147 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 RPL18AQ02543 176 aaKnown RBP1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 SP6Q3SY56 376 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 EIF5AL1Q6IS14 154 aaKnown RBP1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 LAIR2Q6ISS4 152 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 CYP2G1PQ6ZSU1 146 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 LINC00305Q7Z4B0 112 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 BPIFA4PQ86YQ2 179 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 DAND5Q8N907 189 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 DTD1Q8TEA8 209 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 RAB2BQ8WUD1 216 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 CYGBQ8WWM9 190 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 UFD1Q92890 307 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 CARD19Q96LW7 228 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 NDFIP1Q9BT67 221 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 ARL6Q9H0F7 186 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 ARV1Q9H2C2 271 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 DUSP21Q9H596 190 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 PRELID1Q9Y255 219 aa1.09□□□□□ -2.23
DEPDC4-204ENST00000547823 TRBV7-3A0A075B6L6 115 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 TRAV1-2A0A0B4J238 106 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 LOC100130705A0A1B0GUX0 176 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 RBAKDNA6NC62 111 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 A8MWV9 139 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 K7EPK0 472 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 PDCD5O14737 125 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 GYG2O15488 501 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 BCL2P10415 239 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 PIGPP57054 158 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 RAB11AP62491 216 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 UBE2BP63146 152 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 AKR1C1Q04828 323 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 SYCNQ0VAF6 134 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 LGALSLQ3ZCW2 172 aaPredicted RBP1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 COA6Q5JTJ3 125 aaKnown RBP1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 SLC25A34Q6PIV7 304 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 LHFPL1Q86WI0 220 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 SELENOHQ8IZQ5 122 aaKnown RBP1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 EXOC3-AS1Q8N2X6 119 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 ASB13Q8WXK3 278 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 TVP23CQ96ET8 276 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 LINC00526Q96FQ7 95 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 IFT46Q9NQC8 304 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 COMMD3Q9UBI1 195 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 CACFD1Q9UGQ2 172 aa1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 PAIP2BQ9ULR5 123 aaKnown RBP1.08□□□□□ -2.24
DEPDC4-204ENST00000547823 ANAPC10Q9UM13 185 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms