RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 WFDC2Q14508 124 aa6.19□□□□□ -1.42
YBX3-218ENST00000546298 CENPWQ5EE01 88 aa6.19□□□□□ -1.42
YBX3-218ENST00000546298 NEXN-AS1Q8NBZ9 246 aa6.19□□□□□ -1.42
YBX3-218ENST00000546298 CHCHD5Q9BSY4 110 aa6.19□□□□□ -1.42
YBX3-218ENST00000546298 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.18□□□□□ -1.42
YBX3-218ENST00000546298 H7C1H1 209 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 TAGLN2P37802 199 aaKnown RBP6.18□□□□□ -1.42
YBX3-218ENST00000546298 GNG4P50150 75 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 SULT1A2P50226 295 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 SSTP61278 116 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 CACNG7P62955 275 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 C14orf177Q52M58 125 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 ATRAIDQ6UW56 229 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 FER1L6-AS1Q8NA97 138 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 OR2D3Q8NGH3 330 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 C1orf43Q9BWL3 253 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 MED9Q9NWA0 146 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 VAX2Q9UIW0 290 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 PKD1P98161 4303 aa6.18□□□□□ -1.42
YBX3-218ENST00000546298 F2Z2F3 143 aa6.17□□□□□ -1.42
YBX3-218ENST00000546298 P01737 135 aa6.17□□□□□ -1.42
YBX3-218ENST00000546298 MEF2BQ02080 365 aaPredicted RBP6.17□□□□□ -1.42
YBX3-218ENST00000546298 SLC51BQ86UW2 128 aa6.17□□□□□ -1.42
YBX3-218ENST00000546298 TCTE3Q8IZS6 198 aa6.17□□□□□ -1.42
YBX3-218ENST00000546298 C15orf54Q8N8G6 183 aa6.17□□□□□ -1.42
YBX3-218ENST00000546298 DNAJC30Q96LL9 226 aa6.17□□□□□ -1.42
YBX3-218ENST00000546298 DERL1Q9BUN8 251 aa6.17□□□□□ -1.42
YBX3-218ENST00000546298 TPPP3Q9BW30 176 aa6.17□□□□□ -1.42
YBX3-218ENST00000546298 FAM30AQ9NZY2 134 aa6.17□□□□□ -1.42
YBX3-218ENST00000546298 KIF25-AS1Q9Y6Z4 181 aa6.17□□□□□ -1.42
YBX3-218ENST00000546298 RAB19A4D1S5 217 aa6.16□□□□□ -1.42
YBX3-218ENST00000546298 ANGP03950 147 aaKnown RBP6.16□□□□□ -1.42
YBX3-218ENST00000546298 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
YBX3-218ENST00000546298 MGPP08493 103 aa6.16□□□□□ -1.42
YBX3-218ENST00000546298 TRGC1P0CF51 173 aa6.16□□□□□ -1.42
YBX3-218ENST00000546298 IGLC6P0CF74 106 aa6.16□□□□□ -1.42
YBX3-218ENST00000546298 BCL2P10415 239 aa6.16□□□□□ -1.42
YBX3-218ENST00000546298 HAMPP81172 84 aa6.16□□□□□ -1.42
YBX3-218ENST00000546298 MIAQ16674 131 aa6.16□□□□□ -1.42
YBX3-218ENST00000546298 TRBV25-1A0A075B6N4 114 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 IGHV1-24A0A0C4DH33 117 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 C19orf71A6NCJ1 209 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 M0QY20 66 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 IGLV2-8P01709 118 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 GZMBP10144 247 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 MPV17L2Q567V2 206 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 WDR73Q6P4I2 378 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 ENHOQ6UWT2 76 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 Q6ZSA8 131 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
YBX3-218ENST00000546298 LRP1BQ9NZR2 4599 aa6.15□□□□□ -1.43
YBX3-218ENST00000546298 IQCJQ1A5X6 159 aa6.14□□□□□ -1.43
YBX3-218ENST00000546298 DPH3P1Q9H4G8 78 aa6.14□□□□□ -1.43
YBX3-218ENST00000546298 ABCA13Q86UQ4 5058 aa6.13□□□□□ -1.43
YBX3-218ENST00000546298 RBX1P62877 108 aa6.13□□□□□ -1.43
YBX3-218ENST00000546298 BLOC1S1P78537 153 aa6.13□□□□□ -1.43
YBX3-218ENST00000546298 GAGE6Q13070 117 aa6.13□□□□□ -1.43
YBX3-218ENST00000546298 SUMO4Q6EEV6 95 aa6.13□□□□□ -1.43
YBX3-218ENST00000546298 RASL11AQ6T310 242 aa6.13□□□□□ -1.43
YBX3-218ENST00000546298 LYZL1Q6UWQ5 148 aa6.13□□□□□ -1.43
YBX3-218ENST00000546298 NTM-AS1Q6ZSK4 140 aa6.13□□□□□ -1.43
YBX3-218ENST00000546298 C9orf62Q8N4C0 152 aa6.13□□□□□ -1.43
YBX3-218ENST00000546298 PRR34Q9NV39 138 aa6.13□□□□□ -1.43
YBX3-218ENST00000546298 TRBV20OR9-2A0A075B6H5 130 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 HLA-DQA1P01909 254 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 NTF3P20783 257 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 NKX2-5P52952 324 aaPredicted RBP6.12□□□□□ -1.43
YBX3-218ENST00000546298 LINC00528Q8N1L1 170 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 LINC00269Q8N2A0 174 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 NUDT10Q8NFP7 164 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 DNAH5Q8TE73 4624 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 NUDT11Q96G61 164 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 TMEM243Q9BU79 118 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 CHAC1Q9BUX1 264 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 NIT2Q9NQR4 276 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 HSPG2P98160 4391 aa6.12□□□□□ -1.43
YBX3-218ENST00000546298 TRAV8-4A0A0B4J246 113 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 A0A1B0GUV1 79 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 USP17L23D6RBM5 183 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
YBX3-218ENST00000546298 CTRLP40313 264 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 TWIST1Q15672 202 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 LINC01620Q4KN68 170 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 XP32Q5T750 250 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 DGAT2L7PQ6IED9 249 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 Q6ZNX1 250 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 SCXQ7RTU7 201 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 SMIM15Q7Z3B0 74 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 AKAP14Q86UN6 197 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 PGLYRP4Q96LB8 373 aa6.11□□□□□ -1.43
YBX3-218ENST00000546298 RPP21Q9H633 154 aaKnown RBP6.11□□□□□ -1.43
YBX3-218ENST00000546298 TMEM250H0YL14 139 aa6.1□□□□□ -1.43
YBX3-218ENST00000546298 UBE2L6O14933 153 aa6.1□□□□□ -1.43
YBX3-218ENST00000546298 REG3AQ06141 175 aa6.1□□□□□ -1.43
YBX3-218ENST00000546298 COTL1Q14019 142 aa6.1□□□□□ -1.43
YBX3-218ENST00000546298 CLRN3Q8NCR9 226 aa6.1□□□□□ -1.43
YBX3-218ENST00000546298 OCC1Q8TAD7 63 aa6.1□□□□□ -1.43
YBX3-218ENST00000546298 DEFB104AQ8WTQ1 72 aa6.1□□□□□ -1.43
YBX3-218ENST00000546298 CNFNQ9BYD5 112 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms