RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 A0A087WWC5 75 aa12.97□□□□□ -0.33
DDX55-211ENST00000544429 IGHV3-38A0A0C4DH36 116 aa12.97□□□□□ -0.33
DDX55-211ENST00000544429 A0A1B0GUT8 65 aa12.97□□□□□ -0.33
DDX55-211ENST00000544429 SMIM27A0A1W2PRY6 76 aa12.97□□□□□ -0.33
DDX55-211ENST00000544429 MGPP08493 103 aa12.97□□□□□ -0.33
DDX55-211ENST00000544429 NUP35Q8NFH5 326 aa12.97□□□□□ -0.33
DDX55-211ENST00000544429 HECTD4Q9Y4D8 3996 aa12.96□□□□□ -0.33
DDX55-211ENST00000544429 TRAV8-6A0A0B4J262 113 aa12.96□□□□□ -0.33
DDX55-211ENST00000544429 PNRC1Q12796 327 aaPredicted RBP12.96□□□□□ -0.33
DDX55-211ENST00000544429 DNAJC30Q96LL9 226 aa12.96□□□□□ -0.33
DDX55-211ENST00000544429 H7C1H1 209 aa12.95□□□□□ -0.34
DDX55-211ENST00000544429 OR10J3Q5JRS4 329 aa12.95□□□□□ -0.34
DDX55-211ENST00000544429 NAT8BQ9UHF3 227 aa12.95□□□□□ -0.34
DDX55-211ENST00000544429 ADCYAP1P18509 176 aa12.94□□□□□ -0.34
DDX55-211ENST00000544429 RASL11AQ6T310 242 aa12.94□□□□□ -0.34
DDX55-211ENST00000544429 TRAV9-2A0A087WT02 112 aa12.93□□□□□ -0.34
DDX55-211ENST00000544429 A0A1B0GVY2 172 aa12.93□□□□□ -0.34
DDX55-211ENST00000544429 LINC00862A6NCI5 91 aa12.93□□□□□ -0.34
DDX55-211ENST00000544429 Q6ZRN7 208 aaPredicted RBP12.93□□□□□ -0.34
DDX55-211ENST00000544429 DAZ4Q86SG3 579 aaKnown RBP12.93□□□□□ -0.34
DDX55-211ENST00000544429 GATD1Q8NB37 220 aa12.93□□□□□ -0.34
DDX55-211ENST00000544429 FRZBQ92765 325 aa12.93□□□□□ -0.34
DDX55-211ENST00000544429 BORCS7Q96B45 105 aa12.93□□□□□ -0.34
DDX55-211ENST00000544429 TMEM191AQ9H0A3 160 aa12.93□□□□□ -0.34
DDX55-211ENST00000544429 DAZ3Q9NR90 486 aaKnown RBP12.93□□□□□ -0.34
DDX55-211ENST00000544429 PKD1P98161 4303 aa12.93□□□□□ -0.34
DDX55-211ENST00000544429 TMEM218A2RU14 115 aa12.92□□□□□ -0.34
DDX55-211ENST00000544429 SMIM15Q7Z3B0 74 aa12.92□□□□□ -0.34
DDX55-211ENST00000544429 NIT2Q9NQR4 276 aa12.92□□□□□ -0.34
DDX55-211ENST00000544429 TRBV6-8A0A0A6YYG3 113 aa12.91□□□□□ -0.34
DDX55-211ENST00000544429 PRSS29PA6NIE9 313 aa12.91□□□□□ -0.34
DDX55-211ENST00000544429 NTM-AS1Q6ZSK4 140 aa12.91□□□□□ -0.34
DDX55-211ENST00000544429 C10orf126Q8N4M7 172 aa12.91□□□□□ -0.34
DDX55-211ENST00000544429 TRAV26-2A0A0B4J265 109 aa12.9□□□□□ -0.34
DDX55-211ENST00000544429 RIGQ13278 110 aa12.9□□□□□ -0.34
DDX55-211ENST00000544429 COMMD7Q86VX2 200 aa12.9□□□□□ -0.34
DDX55-211ENST00000544429 NIT1Q86X76 327 aa12.9□□□□□ -0.34
DDX55-211ENST00000544429 Q8N3U1 123 aa12.9□□□□□ -0.34
DDX55-211ENST00000544429 RNF185Q96GF1 192 aa12.9□□□□□ -0.34
DDX55-211ENST00000544429 TNFRSF18Q9Y5U5 241 aa12.9□□□□□ -0.34
DDX55-211ENST00000544429 PKHD1P08F94 4074 aa12.9□□□□□ -0.34
DDX55-211ENST00000544429 IBA57-AS1B1ANH7 110 aa12.89□□□□□ -0.35
DDX55-211ENST00000544429 PPP1R2P9O14990 202 aa12.89□□□□□ -0.35
DDX55-211ENST00000544429 RAB4AP20338 218 aa12.88□□□□□ -0.35
DDX55-211ENST00000544429 TNP2Q05952 138 aa12.88□□□□□ -0.35
DDX55-211ENST00000544429 TMEM97Q5BJF2 176 aa12.88□□□□□ -0.35
DDX55-211ENST00000544429 SEC11CQ9BY50 192 aa12.88□□□□□ -0.35
DDX55-211ENST00000544429 A0A1B0GXF2 115 aa12.87□□□□□ -0.35
DDX55-211ENST00000544429 ANAPC16Q96DE5 110 aa12.87□□□□□ -0.35
DDX55-211ENST00000544429 TRBV6-5A0A0K0K1A5 114 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 A0A1B0GW15 77 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 GAS8-AS1O95177 125 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 IGHV3-30P01768 117 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 IGHV3-33P01772 117 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 MT-ND4LP03901 98 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 IGHV3-30-3P0DP02 117 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 IGHV3-30-5P0DP03 117 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 LAGE3Q14657 143 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 IQCJQ1A5X6 159 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 C10orf91Q5T1B1 145 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 NFE4Q86UQ8 179 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 AMN1Q8IY45 258 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
DDX55-211ENST00000544429 RPL39LQ96EH5 51 aaKnown RBP12.86□□□□□ -0.35
DDX55-211ENST00000544429 CHCHD7Q9BUK0 85 aa12.86□□□□□ -0.35
DDX55-211ENST00000544429 DNAH11Q96DT5 4516 aa12.85□□□□□ -0.35
DDX55-211ENST00000544429 F8W036 122 aa12.85□□□□□ -0.35
DDX55-211ENST00000544429 MRAP2Q96G30 205 aa12.84□□□□□ -0.35
DDX55-211ENST00000544429 FAM104BQ5XKR9 115 aa12.83□□□□□ -0.36
DDX55-211ENST00000544429 ATP5L2Q7Z4Y8 100 aa12.83□□□□□ -0.36
DDX55-211ENST00000544429 TRBV25-1A0A075B6N4 114 aa12.82□□□□□ -0.36
DDX55-211ENST00000544429 RPS10P46783 165 aaKnown RBP12.82□□□□□ -0.36
DDX55-211ENST00000544429 HBBP68871 147 aa12.82□□□□□ -0.36
DDX55-211ENST00000544429 CARHSP1Q9Y2V2 147 aaKnown RBP12.82□□□□□ -0.36
DDX55-211ENST00000544429 IGHV1-24A0A0C4DH33 117 aa12.81□□□□□ -0.36
DDX55-211ENST00000544429 CAMPP49913 170 aa12.81□□□□□ -0.36
DDX55-211ENST00000544429 MRPL54Q6P161 138 aaKnown RBP12.81□□□□□ -0.36
DDX55-211ENST00000544429 SDHAF1A6NFY7 115 aa12.8□□□□□ -0.36
DDX55-211ENST00000544429 S100A8P05109 93 aa12.8□□□□□ -0.36
DDX55-211ENST00000544429 MRPL51Q4U2R6 128 aaKnown RBP12.8□□□□□ -0.36
DDX55-211ENST00000544429 MPV17L2Q567V2 206 aa12.8□□□□□ -0.36
DDX55-211ENST00000544429 KCNIP4Q6PIL6 250 aa12.8□□□□□ -0.36
DDX55-211ENST00000544429 NRACQ8N912 160 aa12.8□□□□□ -0.36
DDX55-211ENST00000544429 IMMP2LQ96T52 175 aa12.8□□□□□ -0.36
DDX55-211ENST00000544429 URGCP-MRPS24S4R325 110 aa12.8□□□□□ -0.36
DDX55-211ENST00000544429 A0A087WX48 190 aa12.79□□□□□ -0.36
DDX55-211ENST00000544429 POLR2KP53803 58 aaKnown RBP12.79□□□□□ -0.36
DDX55-211ENST00000544429 PKIAP61925 76 aa12.79□□□□□ -0.36
DDX55-211ENST00000544429 CHCHD5Q9BSY4 110 aa12.79□□□□□ -0.36
DDX55-211ENST00000544429 TMEM70Q9BUB7 260 aa12.79□□□□□ -0.36
DDX55-211ENST00000544429 BIRC6Q9NR09 4857 aa12.79□□□□□ -0.36
DDX55-211ENST00000544429 NCR2O95944 276 aa12.78□□□□□ -0.36
DDX55-211ENST00000544429 COTL1Q14019 142 aa12.78□□□□□ -0.36
DDX55-211ENST00000544429 CTDSP1Q9GZU7 261 aa12.78□□□□□ -0.36
DDX55-211ENST00000544429 TRAV8-3A0A0A6YYJ7 113 aa12.77□□□□□ -0.37
DDX55-211ENST00000544429 TRBV27A0A0K0K1C4 114 aa12.77□□□□□ -0.37
DDX55-211ENST00000544429 SMKR1H3BMG3 65 aa12.77□□□□□ -0.37
DDX55-211ENST00000544429 ATRAIDQ6UW56 229 aa12.77□□□□□ -0.37
DDX55-211ENST00000544429 TMEM243Q9BU79 118 aa12.77□□□□□ -0.37
DDX55-211ENST00000544429 ST20Q9HBF5 79 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms