RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 ELANEP08246 267 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 UBE2D3P61077 147 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 UBE2D2P62837 147 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 MEIG1Q5JSS6 88 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 Q6YL49 198 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 POM121L12Q8N7R1 296 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 SCGB3A1Q96QR1 104 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 PPDPFQ9H3Y8 114 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 CHD6Q8TD26 2715 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 TRAV12-1A0A0B4J245 112 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 FSHBP01225 129 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 CD7P09564 240 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 K7EQG2 157 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 PLNP26678 52 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 SYNJ2BPP57105 145 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 PLEKHB2Q96CS7 222 aa9.14□□□□□ -0.95
LRTOMT-221ENST00000544409 ZNF815PA8K554 130 aa9.13□□□□□ -0.95
LRTOMT-221ENST00000544409 LGALS9O00182 355 aa9.13□□□□□ -0.95
LRTOMT-221ENST00000544409 IGHV4-31P0DP07 118 aa9.13□□□□□ -0.95
LRTOMT-221ENST00000544409 ZNF702PQ9H963 129 aa9.13□□□□□ -0.95
LRTOMT-221ENST00000544409 MUC4Q99102 2169 aa9.13□□□□□ -0.95
LRTOMT-221ENST00000544409 A0A0J9YX75 114 aa9.13□□□□□ -0.95
LRTOMT-221ENST00000544409 H7C1H1 209 aa9.13□□□□□ -0.95
LRTOMT-221ENST00000544409 YAE1D1Q9NRH1 226 aa9.13□□□□□ -0.95
LRTOMT-221ENST00000544409 KIF25-AS1Q9Y6Z4 181 aa9.13□□□□□ -0.95
LRTOMT-221ENST00000544409 IGHV4OR15-8A0A075B7B6 117 aa9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 A0A087WW49 117 aa9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 UBE2D1P51668 147 aa9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 KLHL30-AS1Q8NEE0 82 aa9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 ANKRD17O75179 2603 aaKnown RBP9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 F8VRH5 84 aa9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 C2orf66Q6UXQ4 117 aa9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 UBE2E2Q96LR5 201 aa9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 C9JAW5 83 aa9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 LINC00315P59091 139 aa9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 PRADC1Q9BSG0 188 aa9.12□□□□□ -0.95
LRTOMT-221ENST00000544409 MYO18BQ8IUG5 2567 aa9.11□□□□□ -0.95
LRTOMT-221ENST00000544409 SLC25A20O43772 301 aa9.11□□□□□ -0.95
LRTOMT-221ENST00000544409 IGKV3-20P01619 116 aa9.11□□□□□ -0.95
LRTOMT-221ENST00000544409 HOXD3P31249 432 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-221ENST00000544409 LYRM7Q5U5X0 104 aa9.11□□□□□ -0.95
LRTOMT-221ENST00000544409 BBC3Q96PG8 261 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-221ENST00000544409 M0QXV9 152 aa9.11□□□□□ -0.95
LRTOMT-221ENST00000544409 DUSP14O95147 198 aaKnown RBP9.11□□□□□ -0.95
LRTOMT-221ENST00000544409 NDUFA11Q86Y39 141 aa9.11□□□□□ -0.95
LRTOMT-221ENST00000544409 BEX4Q9NWD9 120 aaPredicted RBP9.11□□□□□ -0.95
LRTOMT-221ENST00000544409 CR1P17927 2039 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 CELSR2Q9HCU4 2923 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 TRPT1Q86TN4 253 aaKnown RBP9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 NEXN-AS1Q8NBZ9 246 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 JPT2Q9H910 190 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 TRAV12-2A0A075B6T6 113 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 SUMO4Q6EEV6 95 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 SBSPONQ8IVN8 264 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 DUX5Q96PT3 197 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 IGHV3-16A0A0C4DH30 117 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 F5H697 171 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 LINC01619G3V211 115 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 RNF152Q8N8N0 203 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 C9orf85Q96MD7 179 aa9.1□□□□□ -0.95
LRTOMT-221ENST00000544409 MAP1AP78559 2803 aaPredicted RBP9.09□□□□□ -0.95
LRTOMT-221ENST00000544409 A0A087WWL8 130 aa9.09□□□□□ -0.95
LRTOMT-221ENST00000544409 DEFB113Q30KQ7 82 aa9.09□□□□□ -0.95
LRTOMT-221ENST00000544409 ZNF843Q8N446 348 aa9.09□□□□□ -0.95
LRTOMT-221ENST00000544409 NTN5Q8WTR8 489 aaPredicted RBP9.09□□□□□ -0.95
LRTOMT-221ENST00000544409 FAM208BQ5VWN6 2430 aa9.09□□□□□ -0.95
LRTOMT-221ENST00000544409 H7C2G1 150 aa9.09□□□□□ -0.95
LRTOMT-221ENST00000544409 KRTAP10-9P60411 292 aa9.09□□□□□ -0.95
LRTOMT-221ENST00000544409 C15orf53Q8NAA6 179 aa9.09□□□□□ -0.95
LRTOMT-221ENST00000544409 BAALCQ8WXS3 180 aa9.09□□□□□ -0.95
LRTOMT-221ENST00000544409 IGHV1OR15-1A0A075B7D0 117 aa9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 SPINK13Q1W4C9 94 aa9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 UTP20O75691 2785 aaKnown RBP9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 CRYBG3Q68DQ2 2970 aa9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 VCYO14598 125 aa9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 CFC1BP0CG36 223 aa9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 CFC1P0CG37 223 aa9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 POLR2KP53803 58 aaKnown RBP9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 LRRC75A-AS1Q8N1F1 130 aa9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 Q8N1Y9 231 aa9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 CHCHD5Q9BSY4 110 aa9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 MDFICQ9P1T7 246 aa9.08□□□□□ -0.96
LRTOMT-221ENST00000544409 TEX49A0A1B0GTD5 131 aa9.07□□□□□ -0.96
LRTOMT-221ENST00000544409 FAM74A4Q5TZK3 123 aa9.07□□□□□ -0.96
LRTOMT-221ENST00000544409 DOPEY2Q9Y3R5 2298 aa9.06□□□□□ -0.96
LRTOMT-221ENST00000544409 USP9YO00507 2555 aaPredicted RBP9.06□□□□□ -0.96
LRTOMT-221ENST00000544409 TP53TG1Q9Y2A0 90 aa9.06□□□□□ -0.96
LRTOMT-221ENST00000544409 PRRC2AP48634 2157 aaKnown RBP9.06□□□□□ -0.96
LRTOMT-221ENST00000544409 SDHAF1A6NFY7 115 aa9.06□□□□□ -0.96
LRTOMT-221ENST00000544409 EMP1P54849 157 aa9.06□□□□□ -0.96
LRTOMT-221ENST00000544409 SLURP1P55000 103 aa9.06□□□□□ -0.96
LRTOMT-221ENST00000544409 C10orf126Q8N4M7 172 aa9.06□□□□□ -0.96
LRTOMT-221ENST00000544409 ZNF462Q96JM2 2506 aa9.05□□□□□ -0.96
LRTOMT-221ENST00000544409 TRGV11A0A075B6L2 103 aa9.05□□□□□ -0.96
LRTOMT-221ENST00000544409 TRBV6-5A0A0K0K1A5 114 aa9.05□□□□□ -0.96
LRTOMT-221ENST00000544409 ZNF56Q15929 161 aa9.05□□□□□ -0.96
LRTOMT-221ENST00000544409 Q8N2B8 174 aa9.05□□□□□ -0.96
LRTOMT-221ENST00000544409 Q96MF0 132 aa9.05□□□□□ -0.96
LRTOMT-221ENST00000544409 TRAV8-4A0A0B4J246 113 aa9.05□□□□□ -0.96
LRTOMT-221ENST00000544409 DEFB136Q30KP8 78 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms