RNA–Protein interactions for RNA: ENST00000543997.1

NPIPB5-223, Transcript of nuclear pore complex interacting protein family member B5, human

TSL 4

Gene NPIPB5, Length 573 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB5-223	ENST00000543997	SFT2D1	Q8WV19	159 aa		3.07	□□□□□ -1.92
NPIPB5-223	ENST00000543997	PCNP	Q8WW12	178 aa	Known RBP	3.07	□□□□□ -1.92
NPIPB5-223	ENST00000543997	FMC1	Q96HJ9	113 aa		3.07	□□□□□ -1.92
NPIPB5-223	ENST00000543997	ZFP30	Q9Y2G7	519 aa		3.07	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TMSB15B	A0A087X1C1	80 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997		A0A1B0GV50	99 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	GAGE12J	A6NER3	117 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997		A8MWV9	139 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	UMAD1	C9J7I0	102 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997		H3BVH4	76 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	MGST1	P10620	155 aa	Known RBP	3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	S100A4	P26447	101 aa	Known RBP	3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	RPL19	P84098	196 aa	Known RBP	3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	GAGE1	Q13065	139 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	GAGE4	Q13068	117 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	GAGE5	Q13069	117 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	LGALSL	Q3ZCW2	172 aa	Predicted RBP	3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	GAGE13	Q4V321	117 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	FAM162B	Q5T6X4	162 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	CST9LP1	Q5W188	147 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TMUB2	Q71RG4	321 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	ATP6V0E2	Q8NHE4	81 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	STOML3	Q8TAV4	291 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	SFRP2	Q96HF1	295 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	DNAJC30	Q96LL9	226 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TCEAL7	Q9BRU2	100 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	PRADC1	Q9BSG0	188 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	ZNF471	Q9BX82	626 aa	Predicted RBP	3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	GTSF1L	Q9H1H1	148 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	DPH3P1	Q9H4G8	78 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997	COX11	Q9Y6N1	276 aa		3.06	□□□□□ -1.92
NPIPB5-223	ENST00000543997		A0A087WWL8	130 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TRAV8-3	A0A0A6YYJ7	113 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TRAV1-1	A0A0B4J248	108 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	KANTR	A0A1W2PQU2	76 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	IGHV3-30	P01768	117 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	IGHV3-33	P01772	117 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	IGHV3-30-3	P0DP02	117 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	IGHV3-30-5	P0DP03	117 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	AKR1C3	P42330	323 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	UBE2G1	P62253	170 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	OR10J3	Q5JRS4	329 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	WDR73	Q6P4I2	378 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997		Q6ZNX1	250 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	DAZ4	Q86SG3	579 aa	Known RBP	3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	OR10AG1	Q8NH19	301 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	BAALC	Q8WXS3	180 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	C11orf52	Q96A22	123 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	DERL1	Q9BUN8	251 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	CDIP1	Q9H305	208 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	DAZ3	Q9NR90	486 aa	Known RBP	3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	KIF25-AS1	Q9Y6Z4	181 aa		3.05	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TRBV20OR9-2	A0A075B6H5	130 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TRAV8-6	A0A0B4J262	113 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	MUC21	A0A0G2JKD1	596 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	MUC21	A0A140T8X8	626 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	RAB19	A4D1S5	217 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	C19orf71	A6NCJ1	209 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997		M0R381	172 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	SNAI2	O43623	268 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	S100A9	P06702	114 aa	Known RBP	3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	CXCL1	P09341	107 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TPT1	P13693	172 aa	Known RBP	3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	RPL35	P42766	123 aa	Known RBP	3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	UBE2D3	P61077	147 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	UBE2D2	P62837	147 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	CIRBP	Q14011	172 aa	Known RBP	3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	PRR27	Q6MZM9	219 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	BAGE2	Q86Y30	109 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TCTE3	Q8IZS6	198 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	PHLDA3	Q9Y5J5	127 aa		3.04	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TRBV10-1	A0A0K0K1A3	114 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	RHOD	O00212	210 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	PFDN1	O60925	122 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	OR5AL1	P0C617	328 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	IGLC6	P0CF74	106 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	GZMB	P10144	247 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	SULT1A2	P50226	295 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	KRTAP10-7	P60409	375 aa	Predicted RBP	3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	TOR2A	Q5JU69	321 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	FAM74A4	Q5TZK3	123 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	NTM-AS1	Q6ZSK4	140 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	NIT1	Q86X76	327 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	ZFP82	Q8N141	532 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	NEXN-AS1	Q8NBZ9	246 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	OR10G8	Q8NGN5	311 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	GNG13	Q9P2W3	67 aa		3.03	□□□□□ -1.92
NPIPB5-223	ENST00000543997	hCG_2014768	A0A024R1R8	64 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	TRBV7-3	A0A075B6L6	115 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997		A0A087WWC5	75 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	RAB5C	P51148	216 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	RAB4B	P61018	213 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	EIF5A	P63241	154 aa	Known RBP	3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	C14orf177	Q52M58	125 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	CENPW	Q5EE01	88 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	KRTAP5-11	Q6L8G4	156 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	REG3G	Q6UW15	175 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	SLC51B	Q86UW2	128 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	C9orf62	Q8N4C0	152 aa		3.02	□□□□□ -1.93
NPIPB5-223	ENST00000543997	RMI2	Q96E14	147 aa		3.02	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms