RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TRAV26-2A0A0B4J265 109 aa10.3□□□□□ -0.76
CD9-210ENST00000543916 H7C1H1 209 aa10.3□□□□□ -0.76
CD9-210ENST00000543916 MT-ND4LP03901 98 aa10.3□□□□□ -0.76
CD9-210ENST00000543916 C10orf91Q5T1B1 145 aa10.3□□□□□ -0.76
CD9-210ENST00000543916 LELP1Q5T871 98 aa10.3□□□□□ -0.76
CD9-210ENST00000543916 RASL11AQ6T310 242 aa10.3□□□□□ -0.76
CD9-210ENST00000543916 GATD1Q8NB37 220 aa10.3□□□□□ -0.76
CD9-210ENST00000543916 ANAPC16Q96DE5 110 aa10.3□□□□□ -0.76
CD9-210ENST00000543916 TMEM191AQ9H0A3 160 aa10.29□□□□□ -0.76
CD9-210ENST00000543916 IGHV3-38A0A0C4DH36 116 aa10.28□□□□□ -0.76
CD9-210ENST00000543916 OR10J3Q5JRS4 329 aa10.28□□□□□ -0.76
CD9-210ENST00000543916 MRPL54Q6P161 138 aaKnown RBP10.28□□□□□ -0.76
CD9-210ENST00000543916 RNF185Q96GF1 192 aa10.28□□□□□ -0.76
CD9-210ENST00000543916 CARHSP1Q9Y2V2 147 aaKnown RBP10.28□□□□□ -0.76
CD9-210ENST00000543916 TRAV8-6A0A0B4J262 113 aa10.27□□□□□ -0.77
CD9-210ENST00000543916 AMN1Q8IY45 258 aa10.27□□□□□ -0.77
CD9-210ENST00000543916 DNAJC30Q96LL9 226 aa10.27□□□□□ -0.77
CD9-210ENST00000543916 NIT2Q9NQR4 276 aa10.27□□□□□ -0.77
CD9-210ENST00000543916 TNFRSF18Q9Y5U5 241 aa10.27□□□□□ -0.77
CD9-210ENST00000543916 A0A087WWC5 75 aa10.26□□□□□ -0.77
CD9-210ENST00000543916 A0A1B0GXF2 115 aa10.26□□□□□ -0.77
CD9-210ENST00000543916 GAS8-AS1O95177 125 aa10.26□□□□□ -0.77
CD9-210ENST00000543916 DNAH10OSP0CZ25 163 aa10.26□□□□□ -0.77
CD9-210ENST00000543916 RAB4AP20338 218 aa10.26□□□□□ -0.77
CD9-210ENST00000543916 CAMPP49913 170 aa10.26□□□□□ -0.77
CD9-210ENST00000543916 TTC32Q5I0X7 151 aa10.26□□□□□ -0.77
CD9-210ENST00000543916 RPL39LQ96EH5 51 aaKnown RBP10.26□□□□□ -0.77
CD9-210ENST00000543916 DNAH2Q9P225 4427 aa10.25□□□□□ -0.77
CD9-210ENST00000543916 A0A1B0GW15 77 aa10.25□□□□□ -0.77
CD9-210ENST00000543916 HBBP68871 147 aa10.25□□□□□ -0.77
CD9-210ENST00000543916 FRAS1Q86XX4 4008 aa10.24□□□□□ -0.77
CD9-210ENST00000543916 RTL8CO15255 209 aa10.24□□□□□ -0.77
CD9-210ENST00000543916 NTM-AS1Q6ZSK4 140 aa10.24□□□□□ -0.77
CD9-210ENST00000543916 DAZ4Q86SG3 579 aaKnown RBP10.24□□□□□ -0.77
CD9-210ENST00000543916 Q8N3U1 123 aa10.24□□□□□ -0.77
CD9-210ENST00000543916 FRZBQ92765 325 aa10.24□□□□□ -0.77
CD9-210ENST00000543916 CTDSP1Q9GZU7 261 aa10.24□□□□□ -0.77
CD9-210ENST00000543916 DAZ3Q9NR90 486 aaKnown RBP10.24□□□□□ -0.77
CD9-210ENST00000543916 DNAH10Q8IVF4 4471 aa10.23□□□□□ -0.77
CD9-210ENST00000543916 TRBV6-8A0A0A6YYG3 113 aa10.23□□□□□ -0.77
CD9-210ENST00000543916 LINC01556Q5JQF7 62 aa10.23□□□□□ -0.77
CD9-210ENST00000543916 C1orf134Q5TEV5 83 aa10.23□□□□□ -0.77
CD9-210ENST00000543916 FAM104BQ5XKR9 115 aa10.23□□□□□ -0.77
CD9-210ENST00000543916 ATP5L2Q7Z4Y8 100 aa10.23□□□□□ -0.77
CD9-210ENST00000543916 CLRN3Q8NCR9 226 aa10.23□□□□□ -0.77
CD9-210ENST00000543916 MRAP2Q96G30 205 aa10.23□□□□□ -0.77
CD9-210ENST00000543916 C7orf77A4D0Y5 90 aa10.22□□□□□ -0.77
CD9-210ENST00000543916 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
CD9-210ENST00000543916 NCR2O95944 276 aa10.22□□□□□ -0.77
CD9-210ENST00000543916 IGHV3-30P01768 117 aa10.22□□□□□ -0.77
CD9-210ENST00000543916 IGHV3-33P01772 117 aa10.22□□□□□ -0.77
CD9-210ENST00000543916 IGHV3-30-3P0DP02 117 aa10.22□□□□□ -0.77
CD9-210ENST00000543916 IGHV3-30-5P0DP03 117 aa10.22□□□□□ -0.77
CD9-210ENST00000543916 RPS10P46783 165 aaKnown RBP10.22□□□□□ -0.77
CD9-210ENST00000543916 MRPL51Q4U2R6 128 aaKnown RBP10.22□□□□□ -0.77
CD9-210ENST00000543916 C6orf223Q8N319 242 aa10.22□□□□□ -0.77
CD9-210ENST00000543916 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.22□□□□□ -0.77
CD9-210ENST00000543916 S100A8P05109 93 aa10.21□□□□□ -0.77
CD9-210ENST00000543916 RHEBQ15382 184 aa10.21□□□□□ -0.77
CD9-210ENST00000543916 DEFB104AQ8WTQ1 72 aa10.21□□□□□ -0.77
CD9-210ENST00000543916 IMMP2LQ96T52 175 aa10.21□□□□□ -0.77
CD9-210ENST00000543916 TRAV9-2A0A087WT02 112 aa10.2□□□□□ -0.78
CD9-210ENST00000543916 TRBV6-5A0A0K0K1A5 114 aa10.2□□□□□ -0.78
CD9-210ENST00000543916 APOC3P02656 99 aa10.2□□□□□ -0.78
CD9-210ENST00000543916 TMEM97Q5BJF2 176 aa10.2□□□□□ -0.78
CD9-210ENST00000543916 NIT1Q86X76 327 aa10.2□□□□□ -0.78
CD9-210ENST00000543916 SLC7A5P1Q8MH63 180 aa10.2□□□□□ -0.78
CD9-210ENST00000543916 BTF3L4Q96K17 158 aa10.2□□□□□ -0.78
CD9-210ENST00000543916 SDHAF1A6NFY7 115 aa10.19□□□□□ -0.78
CD9-210ENST00000543916 K7EP13 123 aa10.19□□□□□ -0.78
CD9-210ENST00000543916 NRACQ8N912 160 aa10.19□□□□□ -0.78
CD9-210ENST00000543916 RPS10P5Q9NQ39 176 aa10.19□□□□□ -0.78
CD9-210ENST00000543916 TMEM242Q9NWH2 141 aa10.19□□□□□ -0.78
CD9-210ENST00000543916 DNAH17Q9UFH2 4485 aa10.19□□□□□ -0.78
CD9-210ENST00000543916 TRBV25-1A0A075B6N4 114 aa10.18□□□□□ -0.78
CD9-210ENST00000543916 IGHV1-24A0A0C4DH33 117 aa10.18□□□□□ -0.78
CD9-210ENST00000543916 IQCJQ1A5X6 159 aa10.18□□□□□ -0.78
CD9-210ENST00000543916 KCNIP4Q6PIL6 250 aa10.18□□□□□ -0.78
CD9-210ENST00000543916 C10orf126Q8N4M7 172 aa10.18□□□□□ -0.78
CD9-210ENST00000543916 IBA57-AS1B1ANH7 110 aa10.17□□□□□ -0.78
CD9-210ENST00000543916 BTF3P20290 206 aaKnown RBP10.17□□□□□ -0.78
CD9-210ENST00000543916 COTL1Q14019 142 aa10.17□□□□□ -0.78
CD9-210ENST00000543916 NDUFA5Q16718 116 aa10.17□□□□□ -0.78
CD9-210ENST00000543916 Q6ZRN7 208 aaPredicted RBP10.17□□□□□ -0.78
CD9-210ENST00000543916 LINC00336Q6ZUF6 198 aa10.17□□□□□ -0.78
CD9-210ENST00000543916 CHCHD5Q9BSY4 110 aa10.17□□□□□ -0.78
CD9-210ENST00000543916 TMEM70Q9BUB7 260 aa10.17□□□□□ -0.78
CD9-210ENST00000543916 ST20Q9HBF5 79 aa10.17□□□□□ -0.78
CD9-210ENST00000543916 URGCP-MRPS24S4R325 110 aa10.17□□□□□ -0.78
CD9-210ENST00000543916 TRAV9-1A0A075B6T8 112 aa10.16□□□□□ -0.78
CD9-210ENST00000543916 D6R8Y8 96 aa10.16□□□□□ -0.78
CD9-210ENST00000543916 CKS2P33552 79 aa10.16□□□□□ -0.78
CD9-210ENST00000543916 POLR2KP53803 58 aaKnown RBP10.16□□□□□ -0.78
CD9-210ENST00000543916 MPV17L2Q567V2 206 aa10.16□□□□□ -0.78
CD9-210ENST00000543916 SVBPQ8N300 66 aa10.16□□□□□ -0.78
CD9-210ENST00000543916 A0A087WX48 190 aa10.15□□□□□ -0.78
CD9-210ENST00000543916 PRSS29PA6NIE9 313 aa10.15□□□□□ -0.78
CD9-210ENST00000543916 TMEM262E9PQX1 116 aa10.15□□□□□ -0.78
CD9-210ENST00000543916 SNAPINO95295 136 aa10.15□□□□□ -0.78
CD9-210ENST00000543916 PMCHP20382 165 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms