RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 NUDT3O95989 172 aa8.35□□□□□ -1.07
DDB1-223ENST00000543658 RAB5AP20339 215 aa8.35□□□□□ -1.07
DDB1-223ENST00000543658 SRIP30626 198 aa8.35□□□□□ -1.07
DDB1-223ENST00000543658 CEMP1Q6PRD7 247 aaPredicted RBP8.35□□□□□ -1.07
DDB1-223ENST00000543658 DNAJC30Q96LL9 226 aa8.35□□□□□ -1.07
DDB1-223ENST00000543658 GAGE12JA6NER3 117 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 COLCA2A8K830 154 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 SMKR1H3BMG3 65 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 H3BNG1 76 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 M0QY20 66 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 GAGE1Q13065 139 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 GAGE4Q13068 117 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 GAGE5Q13069 117 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 MRPL23Q16540 153 aaKnown RBP8.34□□□□□ -1.07
DDB1-223ENST00000543658 KIAA1644Q3SXP7 199 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 GAGE13Q4V321 117 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 Q6ZSN1 163 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 SH2D6Q7Z4S9 175 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 ZNRF2Q8NHG8 242 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 PRELID3AQ96N28 172 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 NIT2Q9NQR4 276 aa8.34□□□□□ -1.07
DDB1-223ENST00000543658 TRBV7-3A0A075B6L6 115 aa8.33□□□□□ -1.08
DDB1-223ENST00000543658 LOC100131303A0A0U1RQF7 123 aa8.33□□□□□ -1.08
DDB1-223ENST00000543658 P0DMU3 169 aa8.33□□□□□ -1.08
DDB1-223ENST00000543658 FAM231AP0DMU4 169 aa8.33□□□□□ -1.08
DDB1-223ENST00000543658 FAM231CP0DMU5 169 aa8.33□□□□□ -1.08
DDB1-223ENST00000543658 ZFAND6Q6FIF0 208 aa8.33□□□□□ -1.08
DDB1-223ENST00000543658 NEXN-AS1Q8NBZ9 246 aa8.33□□□□□ -1.08
DDB1-223ENST00000543658 RPL39LQ96EH5 51 aaKnown RBP8.33□□□□□ -1.08
DDB1-223ENST00000543658 ST20Q9HBF5 79 aa8.33□□□□□ -1.08
DDB1-223ENST00000543658 LAMTOR2Q9Y2Q5 125 aa8.33□□□□□ -1.08
DDB1-223ENST00000543658 PHOX2AO14813 284 aa8.32□□□□□ -1.08
DDB1-223ENST00000543658 VSIG2Q96IQ7 327 aa8.32□□□□□ -1.08
DDB1-223ENST00000543658 MAP1LC3AQ9H492 121 aa8.32□□□□□ -1.08
DDB1-223ENST00000543658 STAB2Q8WWQ8 2551 aa8.31□□□□□ -1.08
DDB1-223ENST00000543658 A0A096LPF7 62 aa8.31□□□□□ -1.08
DDB1-223ENST00000543658 TNFRSF6BO95407 300 aa8.31□□□□□ -1.08
DDB1-223ENST00000543658 TCTAP57738 103 aa8.31□□□□□ -1.08
DDB1-223ENST00000543658 ATP6V0E2Q8NHE4 81 aa8.31□□□□□ -1.08
DDB1-223ENST00000543658 SDHAF1A6NFY7 115 aa8.3□□□□□ -1.08
DDB1-223ENST00000543658 C3orf84H3BNL1 204 aa8.3□□□□□ -1.08
DDB1-223ENST00000543658 NPYP01303 97 aa8.3□□□□□ -1.08
DDB1-223ENST00000543658 TRGC2P03986 189 aa8.3□□□□□ -1.08
DDB1-223ENST00000543658 SUMO2P61956 95 aaKnown RBP8.3□□□□□ -1.08
DDB1-223ENST00000543658 NEGR1Q7Z3B1 354 aa8.3□□□□□ -1.08
DDB1-223ENST00000543658 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
DDB1-223ENST00000543658 C20orf78Q9BR46 151 aa8.3□□□□□ -1.08
DDB1-223ENST00000543658 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
DDB1-223ENST00000543658 TRBV6-5A0A0K0K1A5 114 aa8.29□□□□□ -1.08
DDB1-223ENST00000543658 GAS8-AS1O95177 125 aa8.29□□□□□ -1.08
DDB1-223ENST00000543658 PMCHP20382 165 aa8.29□□□□□ -1.08
DDB1-223ENST00000543658 UBE2D3P61077 147 aa8.29□□□□□ -1.08
DDB1-223ENST00000543658 UBE2D2P62837 147 aa8.29□□□□□ -1.08
DDB1-223ENST00000543658 TMEM97Q5BJF2 176 aa8.29□□□□□ -1.08
DDB1-223ENST00000543658 NRACQ8N912 160 aa8.29□□□□□ -1.08
DDB1-223ENST00000543658 KIR2DL4Q99706 377 aa8.29□□□□□ -1.08
DDB1-223ENST00000543658 IGHV3-38A0A0C4DH36 116 aa8.28□□□□□ -1.08
DDB1-223ENST00000543658 LOC389332A0A1B0GUA5 103 aa8.28□□□□□ -1.08
DDB1-223ENST00000543658 FCER1GP30273 86 aa8.28□□□□□ -1.08
DDB1-223ENST00000543658 COTL1Q14019 142 aa8.28□□□□□ -1.08
DDB1-223ENST00000543658 ALKBH7Q9BT30 221 aaPredicted RBP8.28□□□□□ -1.08
DDB1-223ENST00000543658 TMEM70Q9BUB7 260 aa8.28□□□□□ -1.08
DDB1-223ENST00000543658 SMIM2Q9BVW6 85 aa8.28□□□□□ -1.08
DDB1-223ENST00000543658 C1orf196B1AJZ1 125 aa8.27□□□□□ -1.09
DDB1-223ENST00000543658 I3L3M4 83 aa8.27□□□□□ -1.09
DDB1-223ENST00000543658 VCYO14598 125 aa8.27□□□□□ -1.09
DDB1-223ENST00000543658 TCAPO15273 167 aa8.27□□□□□ -1.09
DDB1-223ENST00000543658 LINC00694P0DN24 101 aa8.27□□□□□ -1.09
DDB1-223ENST00000543658 CCL18P55774 89 aa8.27□□□□□ -1.09
DDB1-223ENST00000543658 UBE2DNLQ8IWF7 75 aa8.27□□□□□ -1.09
DDB1-223ENST00000543658 PRSS3P2Q8NHM4 247 aa8.27□□□□□ -1.09
DDB1-223ENST00000543658 GTSF1LQ9H1H1 148 aa8.27□□□□□ -1.09
DDB1-223ENST00000543658 Q9UF83 564 aa8.27□□□□□ -1.09
DDB1-223ENST00000543658 TGP01266 2768 aa8.26□□□□□ -1.09
DDB1-223ENST00000543658 RPL32P62910 135 aaKnown RBP8.26□□□□□ -1.09
DDB1-223ENST00000543658 FA2HQ7L5A8 372 aa8.26□□□□□ -1.09
DDB1-223ENST00000543658 NXT2Q9NPJ8 142 aaKnown RBP8.26□□□□□ -1.09
DDB1-223ENST00000543658 APLNQ9ULZ1 77 aa8.26□□□□□ -1.09
DDB1-223ENST00000543658 TRBV25-1A0A075B6N4 114 aa8.25□□□□□ -1.09
DDB1-223ENST00000543658 TRBV27A0A0K0K1C4 114 aa8.25□□□□□ -1.09
DDB1-223ENST00000543658 AMTP48728 403 aa8.25□□□□□ -1.09
DDB1-223ENST00000543658 POLR2KP53803 58 aaKnown RBP8.25□□□□□ -1.09
DDB1-223ENST00000543658 RAB5BP61020 215 aa8.25□□□□□ -1.09
DDB1-223ENST00000543658 CASC10Q5T4H9 136 aa8.25□□□□□ -1.09
DDB1-223ENST00000543658 TRAV8-6A0A0B4J262 113 aa8.24□□□□□ -1.09
DDB1-223ENST00000543658 IGHV1-24A0A0C4DH33 117 aa8.24□□□□□ -1.09
DDB1-223ENST00000543658 PRSS47A8MTI9 375 aa8.24□□□□□ -1.09
DDB1-223ENST00000543658 UBE2L6O14933 153 aa8.24□□□□□ -1.09
DDB1-223ENST00000543658 IQCJQ1A5X6 159 aa8.24□□□□□ -1.09
DDB1-223ENST00000543658 BAGE3Q86Y29 109 aa8.24□□□□□ -1.09
DDB1-223ENST00000543658 Q8N8P6 123 aa8.24□□□□□ -1.09
DDB1-223ENST00000543658 C18orf32Q8TCD1 76 aa8.24□□□□□ -1.09
DDB1-223ENST00000543658 IFI27P40305 119 aaPredicted RBP8.23□□□□□ -1.09
DDB1-223ENST00000543658 TIRAPP58753 221 aa8.23□□□□□ -1.09
DDB1-223ENST00000543658 LELP1Q5T871 98 aa8.23□□□□□ -1.09
DDB1-223ENST00000543658 LYPD5Q6UWN5 251 aa8.23□□□□□ -1.09
DDB1-223ENST00000543658 DEFB104AQ8WTQ1 72 aa8.23□□□□□ -1.09
DDB1-223ENST00000543658 TMEM18Q96B42 140 aa8.23□□□□□ -1.09
DDB1-223ENST00000543658 TRBV6-8A0A0A6YYG3 113 aa8.22□□□□□ -1.09
DDB1-223ENST00000543658 K7EMI3 77 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms