RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 C16orf90A8MZG2 172 aa7.47□□□□□ -1.21
DDB1-222ENST00000543627 EREGO14944 169 aa7.47□□□□□ -1.21
DDB1-222ENST00000543627 FUSP35637 526 aaKnown RBP eCLIP7.47□□□□□ -1.21
DDB1-222ENST00000543627 LINC01556Q5JQF7 62 aa7.47□□□□□ -1.21
DDB1-222ENST00000543627 SPATA12Q7Z6I5 190 aa7.47□□□□□ -1.21
DDB1-222ENST00000543627 DAZ4Q86SG3 579 aaKnown RBP7.47□□□□□ -1.21
DDB1-222ENST00000543627 C15orf54Q8N8G6 183 aa7.47□□□□□ -1.21
DDB1-222ENST00000543627 DAZ3Q9NR90 486 aaKnown RBP7.47□□□□□ -1.21
DDB1-222ENST00000543627 KIF25-AS1Q9Y6Z4 181 aa7.47□□□□□ -1.21
DDB1-222ENST00000543627 H7C1H1 209 aa7.46□□□□□ -1.22
DDB1-222ENST00000543627 LINC00694P0DN24 101 aa7.46□□□□□ -1.22
DDB1-222ENST00000543627 FOXA3P55318 350 aaPredicted RBP7.46□□□□□ -1.22
DDB1-222ENST00000543627 FAM74A3Q4VXF1 159 aa7.46□□□□□ -1.22
DDB1-222ENST00000543627 FAM231DQ6ZW35 169 aa7.46□□□□□ -1.22
DDB1-222ENST00000543627 CHCHD5Q9BSY4 110 aa7.46□□□□□ -1.22
DDB1-222ENST00000543627 TRAV26-2A0A0B4J265 109 aa7.45□□□□□ -1.22
DDB1-222ENST00000543627 IBA57-AS1B1ANH7 110 aa7.45□□□□□ -1.22
DDB1-222ENST00000543627 BTF3P20290 206 aaKnown RBP7.45□□□□□ -1.22
DDB1-222ENST00000543627 CTRLP40313 264 aa7.45□□□□□ -1.22
DDB1-222ENST00000543627 RPL23P62829 140 aaKnown RBP7.45□□□□□ -1.22
DDB1-222ENST00000543627 WDR73Q6P4I2 378 aa7.45□□□□□ -1.22
DDB1-222ENST00000543627 RASL11AQ6T310 242 aa7.45□□□□□ -1.22
DDB1-222ENST00000543627 OR10G8Q8NGN5 311 aa7.45□□□□□ -1.22
DDB1-222ENST00000543627 OSTCQ9NRP0 149 aa7.45□□□□□ -1.22
DDB1-222ENST00000543627 NAT8Q9UHE5 227 aa7.45□□□□□ -1.22
DDB1-222ENST00000543627 KLK12Q9UKR0 248 aa7.45□□□□□ -1.22
DDB1-222ENST00000543627 TRBV6-8A0A0A6YYG3 113 aa7.44□□□□□ -1.22
DDB1-222ENST00000543627 HIGD1CA8MV81 97 aa7.44□□□□□ -1.22
DDB1-222ENST00000543627 K7EP13 123 aa7.44□□□□□ -1.22
DDB1-222ENST00000543627 M0QY20 66 aa7.44□□□□□ -1.22
DDB1-222ENST00000543627 Q6ZRN7 208 aaPredicted RBP7.44□□□□□ -1.22
DDB1-222ENST00000543627 TSKUQ8WUA8 353 aa7.44□□□□□ -1.22
DDB1-222ENST00000543627 ISOC2Q96AB3 205 aa7.44□□□□□ -1.22
DDB1-222ENST00000543627 HECTD4Q9Y4D8 3996 aa7.43□□□□□ -1.22
DDB1-222ENST00000543627 PKD1P98161 4303 aa7.43□□□□□ -1.22
DDB1-222ENST00000543627 NDUFS6O75380 124 aaKnown RBP7.43□□□□□ -1.22
DDB1-222ENST00000543627 GAGE6Q13070 117 aa7.43□□□□□ -1.22
DDB1-222ENST00000543627 NIT1Q86X76 327 aa7.43□□□□□ -1.22
DDB1-222ENST00000543627 UBE2WQ96B02 151 aa7.43□□□□□ -1.22
DDB1-222ENST00000543627 DNAJC30Q96LL9 226 aa7.43□□□□□ -1.22
DDB1-222ENST00000543627 NIT2Q9NQR4 276 aa7.43□□□□□ -1.22
DDB1-222ENST00000543627 A0A1B0GUT8 65 aa7.42□□□□□ -1.22
DDB1-222ENST00000543627 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
DDB1-222ENST00000543627 KRTAP10-2P60368 255 aa7.42□□□□□ -1.22
DDB1-222ENST00000543627 CT83Q5H943 113 aa7.42□□□□□ -1.22
DDB1-222ENST00000543627 GATD1Q8NB37 220 aa7.42□□□□□ -1.22
DDB1-222ENST00000543627 SMDT1Q9H4I9 107 aa7.42□□□□□ -1.22
DDB1-222ENST00000543627 V9GYV3 84 aa7.42□□□□□ -1.22
DDB1-222ENST00000543627 TRBV25-1A0A075B6N4 114 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 IGKV2D-24A0A075B6R9 120 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 A0A087WTM6 91 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 TRAV8-3A0A0A6YYJ7 113 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 IGHV1-24A0A0C4DH33 117 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 LECT2O14960 151 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 RIGQ13278 110 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 ELOBQ15370 118 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 TMEM97Q5BJF2 176 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 NTM-AS1Q6ZSK4 140 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 Q8N976 141 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 NUP35Q8NFH5 326 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
DDB1-222ENST00000543627 TM2D2Q9BX73 214 aa7.41□□□□□ -1.22
DDB1-222ENST00000543627 UBE2L6O14933 153 aa7.4□□□□□ -1.22
DDB1-222ENST00000543627 CRPP02741 224 aa7.4□□□□□ -1.22
DDB1-222ENST00000543627 CAMPP49913 170 aa7.4□□□□□ -1.22
DDB1-222ENST00000543627 MPV17L2Q567V2 206 aa7.4□□□□□ -1.22
DDB1-222ENST00000543627 ATRAIDQ6UW56 229 aa7.4□□□□□ -1.22
DDB1-222ENST00000543627 CLPSL2Q6UWE3 100 aa7.4□□□□□ -1.22
DDB1-222ENST00000543627 CNFNQ9BYD5 112 aa7.4□□□□□ -1.22
DDB1-222ENST00000543627 GFRA4Q9GZZ7 299 aa7.4□□□□□ -1.22
DDB1-222ENST00000543627 NAT8BQ9UHF3 227 aa7.4□□□□□ -1.22
DDB1-222ENST00000543627 PMCHP20382 165 aa7.39□□□□□ -1.23
DDB1-222ENST00000543627 COTL1Q14019 142 aa7.39□□□□□ -1.23
DDB1-222ENST00000543627 RMI2Q96E14 147 aa7.39□□□□□ -1.23
DDB1-222ENST00000543627 PGPEP1Q9NXJ5 209 aa7.39□□□□□ -1.23
DDB1-222ENST00000543627 FAM231BA6NCW3 169 aa7.38□□□□□ -1.23
DDB1-222ENST00000543627 SMKR1H3BMG3 65 aa7.38□□□□□ -1.23
DDB1-222ENST00000543627 AMTP48728 403 aa7.38□□□□□ -1.23
DDB1-222ENST00000543627 LAGE3Q14657 143 aa7.38□□□□□ -1.23
DDB1-222ENST00000543627 AMN1Q8IY45 258 aa7.38□□□□□ -1.23
DDB1-222ENST00000543627 BAALCQ8WXS3 180 aa7.38□□□□□ -1.23
DDB1-222ENST00000543627 TMEM243Q9BU79 118 aa7.38□□□□□ -1.23
DDB1-222ENST00000543627 DNAH11Q96DT5 4516 aa7.38□□□□□ -1.23
DDB1-222ENST00000543627 PKHD1P08F94 4074 aa7.38□□□□□ -1.23
DDB1-222ENST00000543627 GAS8-AS1O95177 125 aa7.37□□□□□ -1.23
DDB1-222ENST00000543627 NCR2O95944 276 aa7.37□□□□□ -1.23
DDB1-222ENST00000543627 RAB4AP20338 218 aa7.37□□□□□ -1.23
DDB1-222ENST00000543627 PKIAP61925 76 aa7.37□□□□□ -1.23
DDB1-222ENST00000543627 RBX1P62877 108 aa7.37□□□□□ -1.23
DDB1-222ENST00000543627 IFITM2Q01629 132 aa7.37□□□□□ -1.23
DDB1-222ENST00000543627 CLLU1Q5K131 121 aa7.37□□□□□ -1.23
DDB1-222ENST00000543627 MRPL54Q6P161 138 aaKnown RBP7.37□□□□□ -1.23
DDB1-222ENST00000543627 CHCHD7Q9BUK0 85 aa7.37□□□□□ -1.23
DDB1-222ENST00000543627 TMEM191AQ9H0A3 160 aa7.37□□□□□ -1.23
DDB1-222ENST00000543627 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.36□□□□□ -1.23
DDB1-222ENST00000543627 IGLV5-52A0A0A0MRZ9 124 aa7.36□□□□□ -1.23
DDB1-222ENST00000543627 IGKV3OR2-268A0A0C4DH90 116 aa7.36□□□□□ -1.23
DDB1-222ENST00000543627 SMIM27A0A1W2PRY6 76 aa7.36□□□□□ -1.23
DDB1-222ENST00000543627 SDHAF1A6NFY7 115 aa7.36□□□□□ -1.23
DDB1-222ENST00000543627 Q0VG73 95 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms