RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 OR2D3Q8NGH3 330 aa8.64□□□□□ -1.03
TNFRSF1A-215ENST00000543359 MED9Q9NWA0 146 aa8.64□□□□□ -1.03
TNFRSF1A-215ENST00000543359 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
TNFRSF1A-215ENST00000543359 EPM2AB3EWF7 344 aa8.63□□□□□ -1.03
TNFRSF1A-215ENST00000543359 M0QY20 66 aa8.63□□□□□ -1.03
TNFRSF1A-215ENST00000543359 LECT2O14960 151 aa8.63□□□□□ -1.03
TNFRSF1A-215ENST00000543359 IFNA1P01562 189 aa8.63□□□□□ -1.03
TNFRSF1A-215ENST00000543359 RPS20P60866 119 aaKnown RBP8.63□□□□□ -1.03
TNFRSF1A-215ENST00000543359 FER1L6-AS1Q8NA97 138 aa8.63□□□□□ -1.03
TNFRSF1A-215ENST00000543359 BAALCQ8WXS3 180 aa8.63□□□□□ -1.03
TNFRSF1A-215ENST00000543359 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
TNFRSF1A-215ENST00000543359 TMEM70Q9BUB7 260 aa8.63□□□□□ -1.03
TNFRSF1A-215ENST00000543359 DMBT1Q9UGM3 2413 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF1A-215ENST00000543359 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 A0A087WX48 190 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 F5H697 171 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 HAMPP81172 84 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 ENHOQ6UWT2 76 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 AKAP14Q86UN6 197 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 NUDT10Q8NFP7 164 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 LYPD6BQ8NI32 183 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 UBE2WQ96B02 151 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 NUDT11Q96G61 164 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 COX11Q9Y6N1 276 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 URGCP-MRPS24S4R325 110 aa8.62□□□□□ -1.03
TNFRSF1A-215ENST00000543359 K7EN84 100 aa8.61□□□□□ -1.03
TNFRSF1A-215ENST00000543359 P01737 135 aa8.61□□□□□ -1.03
TNFRSF1A-215ENST00000543359 SMR3BP02814 79 aaPredicted RBP8.61□□□□□ -1.03
TNFRSF1A-215ENST00000543359 TAGLN2P37802 199 aaKnown RBP8.61□□□□□ -1.03
TNFRSF1A-215ENST00000543359 CACNG7P62955 275 aa8.61□□□□□ -1.03
TNFRSF1A-215ENST00000543359 ELOBQ15370 118 aa8.61□□□□□ -1.03
TNFRSF1A-215ENST00000543359 MPV17L2Q567V2 206 aa8.61□□□□□ -1.03
TNFRSF1A-215ENST00000543359 LYZL1Q6UWQ5 148 aa8.61□□□□□ -1.03
TNFRSF1A-215ENST00000543359 OCC1Q8TAD7 63 aa8.61□□□□□ -1.03
TNFRSF1A-215ENST00000543359 TPPP3Q9BW30 176 aa8.61□□□□□ -1.03
TNFRSF1A-215ENST00000543359 hCG_2014768A0A024R1R8 64 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 IGKV2D-24A0A075B6R9 120 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 TMEM262E9PQX1 116 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 F2Z2F3 143 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 SMIM17P0DL12 118 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 Q5VSD8 79 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 SUMO4Q6EEV6 95 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 WDR73Q6P4I2 378 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 Q6ZSA8 131 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 RMI2Q96E14 147 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 CNFNQ9BYD5 112 aa8.6□□□□□ -1.03
TNFRSF1A-215ENST00000543359 LRP1Q07954 4544 aaKnown RBP8.59□□□□□ -1.03
TNFRSF1A-215ENST00000543359 NTF3P20783 257 aa8.59□□□□□ -1.03
TNFRSF1A-215ENST00000543359 CTRLP40313 264 aa8.59□□□□□ -1.03
TNFRSF1A-215ENST00000543359 ALKAL2Q6UX46 152 aa8.59□□□□□ -1.03
TNFRSF1A-215ENST00000543359 Q8N976 141 aa8.59□□□□□ -1.03
TNFRSF1A-215ENST00000543359 RNASE7Q9H1E1 156 aaKnown RBP8.59□□□□□ -1.03
TNFRSF1A-215ENST00000543359 BIN3Q9NQY0 253 aa8.59□□□□□ -1.03
TNFRSF1A-215ENST00000543359 FAT3Q8TDW7 4589 aa8.58□□□□□ -1.04
TNFRSF1A-215ENST00000543359 XKRY2A2RUG3 117 aa8.58□□□□□ -1.04
TNFRSF1A-215ENST00000543359 Q0VG73 95 aa8.58□□□□□ -1.04
TNFRSF1A-215ENST00000543359 IQCJQ1A5X6 159 aa8.58□□□□□ -1.04
TNFRSF1A-215ENST00000543359 TMEM97Q5BJF2 176 aa8.58□□□□□ -1.04
TNFRSF1A-215ENST00000543359 KRTAP26-1Q6PEX3 210 aa8.58□□□□□ -1.04
TNFRSF1A-215ENST00000543359 GTSF1Q8WW33 167 aa8.58□□□□□ -1.04
TNFRSF1A-215ENST00000543359 CHCHD5Q9BSY4 110 aa8.58□□□□□ -1.04
TNFRSF1A-215ENST00000543359 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
TNFRSF1A-215ENST00000543359 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.57□□□□□ -1.04
TNFRSF1A-215ENST00000543359 MGPP08493 103 aa8.57□□□□□ -1.04
TNFRSF1A-215ENST00000543359 RBX1P62877 108 aa8.57□□□□□ -1.04
TNFRSF1A-215ENST00000543359 BLOC1S1P78537 153 aa8.57□□□□□ -1.04
TNFRSF1A-215ENST00000543359 KCNIP4Q6PIL6 250 aa8.57□□□□□ -1.04
TNFRSF1A-215ENST00000543359 C15orf54Q8N8G6 183 aa8.57□□□□□ -1.04
TNFRSF1A-215ENST00000543359 PRR34Q9NV39 138 aa8.57□□□□□ -1.04
TNFRSF1A-215ENST00000543359 TMEM250H0YL14 139 aa8.56□□□□□ -1.04
TNFRSF1A-215ENST00000543359 H7C1H1 209 aa8.56□□□□□ -1.04
TNFRSF1A-215ENST00000543359 INAFM2P0DMQ5 153 aa8.56□□□□□ -1.04
TNFRSF1A-215ENST00000543359 PKIAP61925 76 aa8.56□□□□□ -1.04
TNFRSF1A-215ENST00000543359 GAGE6Q13070 117 aa8.56□□□□□ -1.04
TNFRSF1A-215ENST00000543359 LINC01620Q4KN68 170 aa8.56□□□□□ -1.04
TNFRSF1A-215ENST00000543359 RASL11AQ6T310 242 aa8.56□□□□□ -1.04
TNFRSF1A-215ENST00000543359 FRZBQ92765 325 aa8.56□□□□□ -1.04
TNFRSF1A-215ENST00000543359 DPH3P1Q9H4G8 78 aa8.56□□□□□ -1.04
TNFRSF1A-215ENST00000543359 RPP21Q9H633 154 aaKnown RBP8.56□□□□□ -1.04
TNFRSF1A-215ENST00000543359 TRBV25-1A0A075B6N4 114 aa8.55□□□□□ -1.04
TNFRSF1A-215ENST00000543359 A0A1B0GVG6 124 aa8.55□□□□□ -1.04
TNFRSF1A-215ENST00000543359 ANGP03950 147 aaKnown RBP8.55□□□□□ -1.04
TNFRSF1A-215ENST00000543359 TRGC1P0CF51 173 aa8.55□□□□□ -1.04
TNFRSF1A-215ENST00000543359 NKX2-5P52952 324 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF1A-215ENST00000543359 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.55□□□□□ -1.04
TNFRSF1A-215ENST00000543359 C1orf43Q9BWL3 253 aa8.55□□□□□ -1.04
TNFRSF1A-215ENST00000543359 NIT2Q9NQR4 276 aa8.55□□□□□ -1.04
TNFRSF1A-215ENST00000543359 IGHV1-24A0A0C4DH33 117 aa8.54□□□□□ -1.04
TNFRSF1A-215ENST00000543359 FOXA3P55318 350 aaPredicted RBP8.54□□□□□ -1.04
TNFRSF1A-215ENST00000543359 MIAQ16674 131 aa8.54□□□□□ -1.04
TNFRSF1A-215ENST00000543359 FAM231DQ6ZW35 169 aa8.54□□□□□ -1.04
TNFRSF1A-215ENST00000543359 LINC00269Q8N2A0 174 aa8.54□□□□□ -1.04
TNFRSF1A-215ENST00000543359 GATD1Q8NB37 220 aa8.54□□□□□ -1.04
TNFRSF1A-215ENST00000543359 NDUFS6O75380 124 aaKnown RBP8.53□□□□□ -1.04
TNFRSF1A-215ENST00000543359 CRPP02741 224 aa8.53□□□□□ -1.04
TNFRSF1A-215ENST00000543359 TWIST1Q15672 202 aa8.53□□□□□ -1.04
TNFRSF1A-215ENST00000543359 C20orf203Q8NBC4 194 aa8.53□□□□□ -1.04
TNFRSF1A-215ENST00000543359 PGLYRP4Q96LB8 373 aa8.53□□□□□ -1.04
TNFRSF1A-215ENST00000543359 A0A1B0GUV1 79 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms