RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 BORCS7Q96B45 105 aa12.53□□□□□ -0.4
COPS7A-216ENST00000543170 PGLYRP4Q96LB8 373 aa12.53□□□□□ -0.4
COPS7A-216ENST00000543170 PNRC1Q12796 327 aaPredicted RBP12.52□□□□□ -0.41
COPS7A-216ENST00000543170 LINC01556Q5JQF7 62 aa12.52□□□□□ -0.41
COPS7A-216ENST00000543170 OR10J3Q5JRS4 329 aa12.52□□□□□ -0.41
COPS7A-216ENST00000543170 TRAV9-2A0A087WT02 112 aa12.51□□□□□ -0.41
COPS7A-216ENST00000543170 IGHV3-38A0A0C4DH36 116 aa12.51□□□□□ -0.41
COPS7A-216ENST00000543170 M0QY20 66 aa12.51□□□□□ -0.41
COPS7A-216ENST00000543170 SUMO4Q6EEV6 95 aa12.51□□□□□ -0.41
COPS7A-216ENST00000543170 SMIM15Q7Z3B0 74 aa12.51□□□□□ -0.41
COPS7A-216ENST00000543170 C10orf126Q8N4M7 172 aa12.51□□□□□ -0.41
COPS7A-216ENST00000543170 DNAJC30Q96LL9 226 aa12.51□□□□□ -0.41
COPS7A-216ENST00000543170 HECTD4Q9Y4D8 3996 aa12.5□□□□□ -0.41
COPS7A-216ENST00000543170 A0A1B0GUT8 65 aa12.5□□□□□ -0.41
COPS7A-216ENST00000543170 NAT8BQ9UHF3 227 aa12.5□□□□□ -0.41
COPS7A-216ENST00000543170 SMIM27A0A1W2PRY6 76 aa12.49□□□□□ -0.41
COPS7A-216ENST00000543170 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.49□□□□□ -0.41
COPS7A-216ENST00000543170 BIRC6Q9NR09 4857 aa12.48□□□□□ -0.41
COPS7A-216ENST00000543170 RASL11AQ6T310 242 aa12.48□□□□□ -0.41
COPS7A-216ENST00000543170 DAZ4Q86SG3 579 aaKnown RBP12.48□□□□□ -0.41
COPS7A-216ENST00000543170 NUP35Q8NFH5 326 aa12.48□□□□□ -0.41
COPS7A-216ENST00000543170 FRZBQ92765 325 aa12.48□□□□□ -0.41
COPS7A-216ENST00000543170 DAZ3Q9NR90 486 aaKnown RBP12.48□□□□□ -0.41
COPS7A-216ENST00000543170 PRSS29PA6NIE9 313 aa12.47□□□□□ -0.41
COPS7A-216ENST00000543170 TMEM97Q5BJF2 176 aa12.47□□□□□ -0.41
COPS7A-216ENST00000543170 PPP1R2P9O14990 202 aa12.46□□□□□ -0.41
COPS7A-216ENST00000543170 RIGQ13278 110 aa12.46□□□□□ -0.41
COPS7A-216ENST00000543170 TMEM191AQ9H0A3 160 aa12.46□□□□□ -0.41
COPS7A-216ENST00000543170 NIT2Q9NQR4 276 aa12.46□□□□□ -0.41
COPS7A-216ENST00000543170 TNFRSF18Q9Y5U5 241 aa12.46□□□□□ -0.41
COPS7A-216ENST00000543170 TRBV6-8A0A0A6YYG3 113 aa12.44□□□□□ -0.42
COPS7A-216ENST00000543170 NFE4Q86UQ8 179 aa12.44□□□□□ -0.42
COPS7A-216ENST00000543170 GATD1Q8NB37 220 aa12.44□□□□□ -0.42
COPS7A-216ENST00000543170 CHCHD7Q9BUK0 85 aa12.44□□□□□ -0.42
COPS7A-216ENST00000543170 A0A1B0GVY2 172 aa12.43□□□□□ -0.42
COPS7A-216ENST00000543170 A0A1B0GW15 77 aa12.43□□□□□ -0.42
COPS7A-216ENST00000543170 TMEM218A2RU14 115 aa12.43□□□□□ -0.42
COPS7A-216ENST00000543170 LINC00862A6NCI5 91 aa12.43□□□□□ -0.42
COPS7A-216ENST00000543170 LAGE3Q14657 143 aa12.43□□□□□ -0.42
COPS7A-216ENST00000543170 Q6ZRN7 208 aaPredicted RBP12.43□□□□□ -0.42
COPS7A-216ENST00000543170 COMMD7Q86VX2 200 aa12.43□□□□□ -0.42
COPS7A-216ENST00000543170 ANAPC16Q96DE5 110 aa12.43□□□□□ -0.42
COPS7A-216ENST00000543170 IBA57-AS1B1ANH7 110 aa12.42□□□□□ -0.42
COPS7A-216ENST00000543170 ADCYAP1P18509 176 aa12.42□□□□□ -0.42
COPS7A-216ENST00000543170 NIT1Q86X76 327 aa12.42□□□□□ -0.42
COPS7A-216ENST00000543170 TRAV26-2A0A0B4J265 109 aa12.41□□□□□ -0.42
COPS7A-216ENST00000543170 IGHV3-30P01768 117 aa12.41□□□□□ -0.42
COPS7A-216ENST00000543170 IGHV3-33P01772 117 aa12.41□□□□□ -0.42
COPS7A-216ENST00000543170 MT-ND4LP03901 98 aa12.41□□□□□ -0.42
COPS7A-216ENST00000543170 IGHV3-30-3P0DP02 117 aa12.41□□□□□ -0.42
COPS7A-216ENST00000543170 IGHV3-30-5P0DP03 117 aa12.41□□□□□ -0.42
COPS7A-216ENST00000543170 PKD1P98161 4303 aa12.41□□□□□ -0.42
COPS7A-216ENST00000543170 PKIAP61925 76 aa12.4□□□□□ -0.42
COPS7A-216ENST00000543170 TNP2Q05952 138 aa12.4□□□□□ -0.42
COPS7A-216ENST00000543170 KCNIP4Q6PIL6 250 aa12.4□□□□□ -0.42
COPS7A-216ENST00000543170 NTM-AS1Q6ZSK4 140 aa12.4□□□□□ -0.42
COPS7A-216ENST00000543170 MRAP2Q96G30 205 aa12.4□□□□□ -0.42
COPS7A-216ENST00000543170 RNF185Q96GF1 192 aa12.4□□□□□ -0.42
COPS7A-216ENST00000543170 SEC11CQ9BY50 192 aa12.4□□□□□ -0.42
COPS7A-216ENST00000543170 URGCP-MRPS24S4R325 110 aa12.4□□□□□ -0.42
COPS7A-216ENST00000543170 DNAH11Q96DT5 4516 aa12.4□□□□□ -0.43
COPS7A-216ENST00000543170 TRBV25-1A0A075B6N4 114 aa12.39□□□□□ -0.43
COPS7A-216ENST00000543170 F8W036 122 aa12.39□□□□□ -0.43
COPS7A-216ENST00000543170 RAB4AP20338 218 aa12.39□□□□□ -0.43
COPS7A-216ENST00000543170 IQCJQ1A5X6 159 aa12.39□□□□□ -0.43
COPS7A-216ENST00000543170 TRBV6-5A0A0K0K1A5 114 aa12.38□□□□□ -0.43
COPS7A-216ENST00000543170 A0A1B0GXF2 115 aa12.38□□□□□ -0.43
COPS7A-216ENST00000543170 S100A8P05109 93 aa12.38□□□□□ -0.43
COPS7A-216ENST00000543170 ATP5L2Q7Z4Y8 100 aa12.38□□□□□ -0.43
COPS7A-216ENST00000543170 AMN1Q8IY45 258 aa12.38□□□□□ -0.43
COPS7A-216ENST00000543170 PKHD1P08F94 4074 aa12.37□□□□□ -0.43
COPS7A-216ENST00000543170 A0A087WX48 190 aa12.37□□□□□ -0.43
COPS7A-216ENST00000543170 IGHV1-24A0A0C4DH33 117 aa12.37□□□□□ -0.43
COPS7A-216ENST00000543170 HBBP68871 147 aa12.37□□□□□ -0.43
COPS7A-216ENST00000543170 Q8N3U1 123 aa12.37□□□□□ -0.43
COPS7A-216ENST00000543170 RPL39LQ96EH5 51 aaKnown RBP12.37□□□□□ -0.43
COPS7A-216ENST00000543170 DYNC1H1Q14204 4646 aaKnown RBP12.36□□□□□ -0.43
COPS7A-216ENST00000543170 ELOBQ15370 118 aa12.36□□□□□ -0.43
COPS7A-216ENST00000543170 COTL1Q14019 142 aa12.35□□□□□ -0.43
COPS7A-216ENST00000543170 C10orf91Q5T1B1 145 aa12.35□□□□□ -0.43
COPS7A-216ENST00000543170 FAM104BQ5XKR9 115 aa12.35□□□□□ -0.43
COPS7A-216ENST00000543170 MRPL54Q6P161 138 aaKnown RBP12.35□□□□□ -0.43
COPS7A-216ENST00000543170 CHCHD5Q9BSY4 110 aa12.35□□□□□ -0.43
COPS7A-216ENST00000543170 TRAV8-3A0A0A6YYJ7 113 aa12.34□□□□□ -0.43
COPS7A-216ENST00000543170 SDHAF1A6NFY7 115 aa12.34□□□□□ -0.43
COPS7A-216ENST00000543170 NCR2O95944 276 aa12.34□□□□□ -0.43
COPS7A-216ENST00000543170 PPP1R17O96001 155 aa12.34□□□□□ -0.43
COPS7A-216ENST00000543170 CAMPP49913 170 aa12.34□□□□□ -0.43
COPS7A-216ENST00000543170 MPV17L2Q567V2 206 aa12.33□□□□□ -0.44
COPS7A-216ENST00000543170 IMMP2LQ96T52 175 aa12.33□□□□□ -0.44
COPS7A-216ENST00000543170 TMEM243Q9BU79 118 aa12.33□□□□□ -0.44
COPS7A-216ENST00000543170 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
COPS7A-216ENST00000543170 CARHSP1Q9Y2V2 147 aaKnown RBP12.33□□□□□ -0.44
COPS7A-216ENST00000543170 TMEM262E9PQX1 116 aa12.32□□□□□ -0.44
COPS7A-216ENST00000543170 GAS8-AS1O95177 125 aa12.32□□□□□ -0.44
COPS7A-216ENST00000543170 ST20Q9HBF5 79 aa12.32□□□□□ -0.44
COPS7A-216ENST00000543170 RPS10P46783 165 aaKnown RBP12.31□□□□□ -0.44
COPS7A-216ENST00000543170 AMTP48728 403 aa12.31□□□□□ -0.44
COPS7A-216ENST00000543170 MRPL51Q4U2R6 128 aaKnown RBP12.31□□□□□ -0.44
COPS7A-216ENST00000543170 BTF3L4Q96K17 158 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms