RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 SFT2D1Q8WV19 159 aa3.07□□□□□ -1.92
NPIPB3-211ENST00000542953 PCNPQ8WW12 178 aaKnown RBP3.07□□□□□ -1.92
NPIPB3-211ENST00000542953 FMC1Q96HJ9 113 aa3.07□□□□□ -1.92
NPIPB3-211ENST00000542953 ZFP30Q9Y2G7 519 aa3.07□□□□□ -1.92
NPIPB3-211ENST00000542953 TMSB15BA0A087X1C1 80 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 A0A1B0GV50 99 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 GAGE12JA6NER3 117 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 A8MWV9 139 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 UMAD1C9J7I0 102 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 H3BVH4 76 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 MGST1P10620 155 aaKnown RBP3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 S100A4P26447 101 aaKnown RBP3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 RPL19P84098 196 aaKnown RBP3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 GAGE1Q13065 139 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 GAGE4Q13068 117 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 GAGE5Q13069 117 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 LGALSLQ3ZCW2 172 aaPredicted RBP3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 GAGE13Q4V321 117 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 FAM162BQ5T6X4 162 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 CST9LP1Q5W188 147 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 TMUB2Q71RG4 321 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 ATP6V0E2Q8NHE4 81 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 STOML3Q8TAV4 291 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 SFRP2Q96HF1 295 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 DNAJC30Q96LL9 226 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 TCEAL7Q9BRU2 100 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 PRADC1Q9BSG0 188 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 ZNF471Q9BX82 626 aaPredicted RBP3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 GTSF1LQ9H1H1 148 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 DPH3P1Q9H4G8 78 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 COX11Q9Y6N1 276 aa3.06□□□□□ -1.92
NPIPB3-211ENST00000542953 A0A087WWL8 130 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 TRAV8-3A0A0A6YYJ7 113 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 TRAV1-1A0A0B4J248 108 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 KANTRA0A1W2PQU2 76 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 IGHV3-30P01768 117 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 IGHV3-33P01772 117 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 IGHV3-30-3P0DP02 117 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 IGHV3-30-5P0DP03 117 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 AKR1C3P42330 323 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 UBE2G1P62253 170 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 OR10J3Q5JRS4 329 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 WDR73Q6P4I2 378 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 Q6ZNX1 250 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 DAZ4Q86SG3 579 aaKnown RBP3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 OR10AG1Q8NH19 301 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 BAALCQ8WXS3 180 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 C11orf52Q96A22 123 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 DERL1Q9BUN8 251 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 CDIP1Q9H305 208 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 DAZ3Q9NR90 486 aaKnown RBP3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 KIF25-AS1Q9Y6Z4 181 aa3.05□□□□□ -1.92
NPIPB3-211ENST00000542953 TRBV20OR9-2A0A075B6H5 130 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 TRAV8-6A0A0B4J262 113 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 MUC21A0A0G2JKD1 596 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 MUC21A0A140T8X8 626 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 RAB19A4D1S5 217 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 C19orf71A6NCJ1 209 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 M0R381 172 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 SNAI2O43623 268 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 S100A9P06702 114 aaKnown RBP3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 CXCL1P09341 107 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 TPT1P13693 172 aaKnown RBP3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 RPL35P42766 123 aaKnown RBP3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 UBE2D3P61077 147 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 UBE2D2P62837 147 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 CIRBPQ14011 172 aaKnown RBP3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 PRR27Q6MZM9 219 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 BAGE2Q86Y30 109 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 TCTE3Q8IZS6 198 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 PHLDA3Q9Y5J5 127 aa3.04□□□□□ -1.92
NPIPB3-211ENST00000542953 TRBV10-1A0A0K0K1A3 114 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 RHODO00212 210 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 PFDN1O60925 122 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 OR5AL1P0C617 328 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 IGLC6P0CF74 106 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 GZMBP10144 247 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 SULT1A2P50226 295 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 TOR2AQ5JU69 321 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 FAM74A4Q5TZK3 123 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 NTM-AS1Q6ZSK4 140 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 NIT1Q86X76 327 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 ZFP82Q8N141 532 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 NEXN-AS1Q8NBZ9 246 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 OR10G8Q8NGN5 311 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 GNG13Q9P2W3 67 aa3.03□□□□□ -1.92
NPIPB3-211ENST00000542953 hCG_2014768A0A024R1R8 64 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 TRBV7-3A0A075B6L6 115 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 A0A087WWC5 75 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 RAB5CP51148 216 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 RAB4BP61018 213 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 EIF5AP63241 154 aaKnown RBP3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 C14orf177Q52M58 125 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 CENPWQ5EE01 88 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 REG3GQ6UW15 175 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 SLC51BQ86UW2 128 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 C9orf62Q8N4C0 152 aa3.02□□□□□ -1.93
NPIPB3-211ENST00000542953 RMI2Q96E14 147 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms