RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 A0A1W2PPV4 95 aa5.68□□□□□ -1.5
C2CD3-219ENST00000542930 GRIFINA4D1Z8 144 aa5.68□□□□□ -1.5
C2CD3-219ENST00000542930 RAB2AP61019 212 aa5.68□□□□□ -1.5
C2CD3-219ENST00000542930 FER1L6-AS1Q8NA97 138 aa5.68□□□□□ -1.5
C2CD3-219ENST00000542930 SEC22CQ9BRL7 303 aa5.68□□□□□ -1.5
C2CD3-219ENST00000542930 EPDR1Q9UM22 224 aa5.68□□□□□ -1.5
C2CD3-219ENST00000542930 IGLV4-60A0A075B6I1 120 aa5.67□□□□□ -1.5
C2CD3-219ENST00000542930 GVQW2A0A096LPI5 108 aaPredicted RBP5.67□□□□□ -1.5
C2CD3-219ENST00000542930 GAGE12HA6NDE8 117 aa5.67□□□□□ -1.5
C2CD3-219ENST00000542930 CENPXA8MT69 81 aa5.67□□□□□ -1.5
C2CD3-219ENST00000542930 M0R036 132 aa5.67□□□□□ -1.5
C2CD3-219ENST00000542930 LYRM1O43325 122 aa5.67□□□□□ -1.5
C2CD3-219ENST00000542930 MT-ND6P03923 174 aa5.67□□□□□ -1.5
C2CD3-219ENST00000542930 DIRC1Q969H9 104 aa5.67□□□□□ -1.5
C2CD3-219ENST00000542930 AQP10Q96PS8 301 aa5.67□□□□□ -1.5
C2CD3-219ENST00000542930 HMGB3O15347 200 aaKnown RBP5.66□□□□□ -1.5
C2CD3-219ENST00000542930 CRIP1P50238 77 aa5.66□□□□□ -1.5
C2CD3-219ENST00000542930 SUMO1P63165 101 aaKnown RBP5.66□□□□□ -1.5
C2CD3-219ENST00000542930 C1orf137Q5JT78 98 aa5.66□□□□□ -1.5
C2CD3-219ENST00000542930 SUN5Q8TC36 379 aa5.66□□□□□ -1.5
C2CD3-219ENST00000542930 ARL2-SNX15V9GYD0 113 aa5.66□□□□□ -1.5
C2CD3-219ENST00000542930 ARL14EPLP0DKL9 152 aa5.65□□□□□ -1.5
C2CD3-219ENST00000542930 SULT1A2P50226 295 aa5.65□□□□□ -1.5
C2CD3-219ENST00000542930 SCGB1C1Q8TD33 95 aa5.65□□□□□ -1.5
C2CD3-219ENST00000542930 NUDT15Q9NV35 164 aa5.65□□□□□ -1.5
C2CD3-219ENST00000542930 TRAV1-1A0A0B4J248 108 aa5.64□□□□□ -1.51
C2CD3-219ENST00000542930 TRAV34A0A0B4J273 112 aa5.64□□□□□ -1.51
C2CD3-219ENST00000542930 F5H697 171 aa5.64□□□□□ -1.51
C2CD3-219ENST00000542930 H0Y9J4 135 aa5.64□□□□□ -1.51
C2CD3-219ENST00000542930 LINC01559Q495D7 138 aa5.64□□□□□ -1.51
C2CD3-219ENST00000542930 TMEM243Q9BU79 118 aa5.64□□□□□ -1.51
C2CD3-219ENST00000542930 TMSB15BA0A087X1C1 80 aa5.63□□□□□ -1.51
C2CD3-219ENST00000542930 A0A1W2PNN7 141 aa5.63□□□□□ -1.51
C2CD3-219ENST00000542930 SH2D1AO60880 128 aa5.63□□□□□ -1.51
C2CD3-219ENST00000542930 IGLV7-43P04211 117 aa5.63□□□□□ -1.51
C2CD3-219ENST00000542930 KRTAP1-4P0C5Y4 121 aa5.63□□□□□ -1.51
C2CD3-219ENST00000542930 STAG3L2P0CL84 134 aa5.63□□□□□ -1.51
C2CD3-219ENST00000542930 STAG3L3P0CL85 134 aa5.63□□□□□ -1.51
C2CD3-219ENST00000542930 RPL13AP40429 203 aaKnown RBP5.63□□□□□ -1.51
C2CD3-219ENST00000542930 PTTG1IPP53801 180 aa5.63□□□□□ -1.51
C2CD3-219ENST00000542930 COX8CQ7Z4L0 72 aa5.63□□□□□ -1.51
C2CD3-219ENST00000542930 CARD19Q96LW7 228 aa5.63□□□□□ -1.51
C2CD3-219ENST00000542930 H0YIZ8 118 aa5.62□□□□□ -1.51
C2CD3-219ENST00000542930 H2AFB2P0C5Z0 115 aa5.62□□□□□ -1.51
C2CD3-219ENST00000542930 GCHFRP30047 84 aa5.62□□□□□ -1.51
C2CD3-219ENST00000542930 AMTP48728 403 aa5.62□□□□□ -1.51
C2CD3-219ENST00000542930 UBE2D1P51668 147 aa5.62□□□□□ -1.51
C2CD3-219ENST00000542930 FAM162BQ5T6X4 162 aa5.62□□□□□ -1.51
C2CD3-219ENST00000542930 Q86TA4 180 aa5.62□□□□□ -1.51
C2CD3-219ENST00000542930 IGKV3OR2-268A0A0C4DH90 116 aa5.61□□□□□ -1.51
C2CD3-219ENST00000542930 A6NHS1 94 aa5.61□□□□□ -1.51
C2CD3-219ENST00000542930 SIX6O95475 246 aa5.61□□□□□ -1.51
C2CD3-219ENST00000542930 RPL12P30050 165 aaKnown RBP5.61□□□□□ -1.51
C2CD3-219ENST00000542930 CDC34P49427 236 aaPredicted RBP5.61□□□□□ -1.51
C2CD3-219ENST00000542930 IFITM3Q01628 133 aa5.61□□□□□ -1.51
C2CD3-219ENST00000542930 ZNF674Q2M3X9 581 aa5.61□□□□□ -1.51
C2CD3-219ENST00000542930 OR10AG1Q8NH19 301 aa5.61□□□□□ -1.51
C2CD3-219ENST00000542930 CHCHD10Q8WYQ3 142 aaPredicted RBP5.61□□□□□ -1.51
C2CD3-219ENST00000542930 CCDC32Q9BV29 185 aa5.61□□□□□ -1.51
C2CD3-219ENST00000542930 ZNF471Q9BX82 626 aaPredicted RBP5.61□□□□□ -1.51
C2CD3-219ENST00000542930 TMEM167BQ9NRX6 74 aa5.61□□□□□ -1.51
C2CD3-219ENST00000542930 ZFP30Q9Y2G7 519 aa5.61□□□□□ -1.51
C2CD3-219ENST00000542930 A0A1W2PRE2 83 aa5.6□□□□□ -1.51
C2CD3-219ENST00000542930 UBE2L6O14933 153 aa5.6□□□□□ -1.51
C2CD3-219ENST00000542930 CYCSP99999 105 aaKnown RBP5.6□□□□□ -1.51
C2CD3-219ENST00000542930 GAGE2BQ13066 116 aa5.6□□□□□ -1.51
C2CD3-219ENST00000542930 LRRC37A5PQ49AS3 106 aa5.6□□□□□ -1.51
C2CD3-219ENST00000542930 RAB24Q969Q5 203 aa5.6□□□□□ -1.51
C2CD3-219ENST00000542930 SMIM3Q9BZL3 60 aa5.6□□□□□ -1.51
C2CD3-219ENST00000542930 NDUFA13Q9P0J0 144 aa5.6□□□□□ -1.51
C2CD3-219ENST00000542930 HSPB11Q9Y547 144 aa5.6□□□□□ -1.51
C2CD3-219ENST00000542930 LOC107984640A0A0U1RRK4 108 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 FAM240BA0A1B0GVZ2 78 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 M0QY20 66 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 PEX7O00628 323 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 TSPAN13O95857 204 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 SMIM17P0DL12 118 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 SYCNQ0VAF6 134 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 FOXI1Q12951 378 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 C9orf116Q5BN46 136 aaPredicted RBP5.59□□□□□ -1.51
C2CD3-219ENST00000542930 PHF5AQ7RTV0 110 aaKnown RBP5.59□□□□□ -1.51
C2CD3-219ENST00000542930 LINC00526Q96FQ7 95 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 PGLYRP4Q96LB8 373 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 MED28Q9H204 178 aa5.59□□□□□ -1.51
C2CD3-219ENST00000542930 IGHV1-58A0A0C4DH39 117 aa5.58□□□□□ -1.52
C2CD3-219ENST00000542930 SNAI2O43623 268 aa5.58□□□□□ -1.52
C2CD3-219ENST00000542930 CXorf1O96002 111 aa5.58□□□□□ -1.52
C2CD3-219ENST00000542930 FGF6P10767 208 aa5.58□□□□□ -1.52
C2CD3-219ENST00000542930 EIF5AP63241 154 aaKnown RBP5.58□□□□□ -1.52
C2CD3-219ENST00000542930 SPANXN1Q5VSR9 72 aa5.58□□□□□ -1.52
C2CD3-219ENST00000542930 HIST1H2BAQ96A08 127 aa5.58□□□□□ -1.52
C2CD3-219ENST00000542930 SSBP4Q9BWG4 385 aaPredicted RBP5.58□□□□□ -1.52
C2CD3-219ENST00000542930 CARHSP1Q9Y2V2 147 aaKnown RBP5.58□□□□□ -1.52
C2CD3-219ENST00000542930 ZNF561-AS1K7EIQ3 104 aa5.57□□□□□ -1.52
C2CD3-219ENST00000542930 UPK1BO75841 260 aa5.57□□□□□ -1.52
C2CD3-219ENST00000542930 CXCL1P09341 107 aa5.57□□□□□ -1.52
C2CD3-219ENST00000542930 OR5AL1P0C617 328 aa5.57□□□□□ -1.52
C2CD3-219ENST00000542930 H2BFSP57053 126 aa5.57□□□□□ -1.52
C2CD3-219ENST00000542930 LINC01547P58512 204 aaPredicted RBP5.57□□□□□ -1.52
C2CD3-219ENST00000542930 MZT2BQ6NZ67 158 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms