RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 RHODO00212 210 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 EIF4EBP3O60516 100 aaPredicted RBP9.57□□□□□ -0.88
DDX11-223ENST00000542838 C20orf203Q8NBC4 194 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 TMEM263Q8WUH6 116 aaKnown RBP9.57□□□□□ -0.88
DDX11-223ENST00000542838 ERG28Q9UKR5 140 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 IGHV1OR15-1A0A075B7D0 117 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 A0A0J9YX75 114 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 A0A0J9YXV3 536 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 C9JAW5 83 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 SLC25A20O43772 301 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 TMEM95Q3KNT9 176 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 CELSR1Q9NYQ6 3014 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 I3L3M4 83 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 SPINK13Q1W4C9 94 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 ODF3Q96PU9 254 aa9.57□□□□□ -0.88
DDX11-223ENST00000542838 SNRPD3P62318 126 aaKnown RBP9.56□□□□□ -0.88
DDX11-223ENST00000542838 CFHR3Q02985 330 aa9.56□□□□□ -0.88
DDX11-223ENST00000542838 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
DDX11-223ENST00000542838 A0A0B4J2C4 111 aa9.55□□□□□ -0.88
DDX11-223ENST00000542838 LY6DQ14210 128 aa9.55□□□□□ -0.88
DDX11-223ENST00000542838 Q1RN00 199 aa9.55□□□□□ -0.88
DDX11-223ENST00000542838 ZNF580Q9UK33 172 aa9.55□□□□□ -0.88
DDX11-223ENST00000542838 TRAV26-1A0A087WT03 109 aa9.55□□□□□ -0.88
DDX11-223ENST00000542838 TMEM262E9PQX1 116 aa9.54□□□□□ -0.88
DDX11-223ENST00000542838 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.54□□□□□ -0.88
DDX11-223ENST00000542838 M0R2P5 195 aa9.54□□□□□ -0.88
DDX11-223ENST00000542838 C10orf105Q8TEF2 133 aa9.54□□□□□ -0.88
DDX11-223ENST00000542838 SPXQ9BT56 116 aa9.54□□□□□ -0.88
DDX11-223ENST00000542838 A0A0J9YXY3 114 aa9.53□□□□□ -0.88
DDX11-223ENST00000542838 K7EQG2 157 aa9.53□□□□□ -0.88
DDX11-223ENST00000542838 CLUHP3Q96NS8 147 aa9.53□□□□□ -0.88
DDX11-223ENST00000542838 Q5PR19 223 aa9.53□□□□□ -0.88
DDX11-223ENST00000542838 C10orf99Q6UWK7 81 aa9.53□□□□□ -0.88
DDX11-223ENST00000542838 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.88
DDX11-223ENST00000542838 PSMB8P28062 276 aa9.52□□□□□ -0.88
DDX11-223ENST00000542838 IGHV3-30-3P0DP02 117 aa9.52□□□□□ -0.89
DDX11-223ENST00000542838 CD28P10747 220 aa9.52□□□□□ -0.89
DDX11-223ENST00000542838 BEX4Q9NWD9 120 aaPredicted RBP9.52□□□□□ -0.89
DDX11-223ENST00000542838 IGHV3-73A0A0B4J1V6 119 aa9.52□□□□□ -0.89
DDX11-223ENST00000542838 M0QXV9 152 aa9.52□□□□□ -0.89
DDX11-223ENST00000542838 ELANEP08246 267 aa9.52□□□□□ -0.89
DDX11-223ENST00000542838 ATXN8Q156A1 80 aa9.52□□□□□ -0.89
DDX11-223ENST00000542838 CCL19Q99731 98 aa9.52□□□□□ -0.89
DDX11-223ENST00000542838 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.89
DDX11-223ENST00000542838 SORL1Q92673 2214 aa9.51□□□□□ -0.89
DDX11-223ENST00000542838 VPS13CQ709C8 3753 aa9.51□□□□□ -0.89
DDX11-223ENST00000542838 TRGV11A0A075B6L2 103 aa9.51□□□□□ -0.89
DDX11-223ENST00000542838 IGHV4-30-2A0A087WSY4 118 aa9.51□□□□□ -0.89
DDX11-223ENST00000542838 MSMBP08118 114 aa9.51□□□□□ -0.89
DDX11-223ENST00000542838 HTN1P15515 57 aa9.51□□□□□ -0.89
DDX11-223ENST00000542838 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■■■■□ 23.3
DDX11-223ENST00000542838 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
DDX11-223ENST00000542838 AVPP01185 164 aa9.5□□□□□ -0.89
DDX11-223ENST00000542838 LINC01620Q4KN68 170 aa9.5□□□□□ -0.89
DDX11-223ENST00000542838 NTN5Q8WTR8 489 aaPredicted RBP9.5□□□□□ -0.89
DDX11-223ENST00000542838 TRAV8-3A0A0A6YYJ7 113 aa9.5□□□□□ -0.89
DDX11-223ENST00000542838 PRSS2P07478 247 aa9.5□□□□□ -0.89
DDX11-223ENST00000542838 CEMP1Q6PRD7 247 aaPredicted RBP9.5□□□□□ -0.89
DDX11-223ENST00000542838 GNLYP22749 145 aa9.5□□□□□ -0.89
DDX11-223ENST00000542838 SYNJ2BPP57105 145 aa9.5□□□□□ -0.89
DDX11-223ENST00000542838 RNASE13Q5GAN3 156 aaKnown RBP9.5□□□□□ -0.89
DDX11-223ENST00000542838 ZFAND6Q6FIF0 208 aa9.5□□□□□ -0.89
DDX11-223ENST00000542838 ATP5J2P56134 94 aa9.49□□□□□ -0.89
DDX11-223ENST00000542838 PROK1P58294 105 aa9.49□□□□□ -0.89
DDX11-223ENST00000542838 RNF183Q96D59 192 aa9.49□□□□□ -0.89
DDX11-223ENST00000542838 DUX5Q96PT3 197 aa9.49□□□□□ -0.89
DDX11-223ENST00000542838 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
DDX11-223ENST00000542838 DOPEY2Q9Y3R5 2298 aa9.49□□□□□ -0.89
DDX11-223ENST00000542838 MRPS36P82909 103 aaKnown RBP9.49□□□□□ -0.89
DDX11-223ENST00000542838 TEX29Q8N6K0 151 aa9.49□□□□□ -0.89
DDX11-223ENST00000542838 TRBV30A0A0K0K1B3 111 aa9.48□□□□□ -0.89
DDX11-223ENST00000542838 TRIAP1O43715 76 aa9.48□□□□□ -0.89
DDX11-223ENST00000542838 FAM104AQ969W3 186 aa9.48□□□□□ -0.89
DDX11-223ENST00000542838 LITAFQ99732 161 aa9.48□□□□□ -0.89
DDX11-223ENST00000542838 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
DDX11-223ENST00000542838 RBMY1A1P0DJD3 496 aaKnown RBP9.47□□□□□ -0.89
DDX11-223ENST00000542838 RBMY1CP0DJD4 496 aa9.47□□□□□ -0.89
DDX11-223ENST00000542838 RBMY1FQ15415 496 aaKnown RBP9.47□□□□□ -0.89
DDX11-223ENST00000542838 ANAPC13Q9BS18 74 aa9.47□□□□□ -0.89
DDX11-223ENST00000542838 NDUFA12Q9UI09 145 aa9.47□□□□□ -0.89
DDX11-223ENST00000542838 TNFRSF18Q9Y5U5 241 aa9.47□□□□□ -0.89
DDX11-223ENST00000542838 IGHV1-58A0A0C4DH39 117 aa9.47□□□□□ -0.89
DDX11-223ENST00000542838 TRBV10-2A0A0K0K1G8 114 aa9.47□□□□□ -0.89
DDX11-223ENST00000542838 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
DDX11-223ENST00000542838 CSPG4Q6UVK1 2322 aa9.46□□□□□ -0.89
DDX11-223ENST00000542838 KNCNA6PVL3 124 aa9.46□□□□□ -0.89
DDX11-223ENST00000542838 NPC2P61916 151 aa9.46□□□□□ -0.89
DDX11-223ENST00000542838 SVIPQ8NHG7 77 aa9.46□□□□□ -0.89
DDX11-223ENST00000542838 CITED1Q99966 193 aa9.46□□□□□ -0.89
DDX11-223ENST00000542838 TEX49A0A1B0GTD5 131 aa9.46□□□□□ -0.9
DDX11-223ENST00000542838 DEFB112Q30KQ8 113 aa9.46□□□□□ -0.9
DDX11-223ENST00000542838 A8MZ25 164 aa9.45□□□□□ -0.9
DDX11-223ENST00000542838 SPANXDQ9BXN6 97 aa9.45□□□□□ -0.9
DDX11-223ENST00000542838 EDA2RQ9HAV5 297 aa9.45□□□□□ -0.9
DDX11-223ENST00000542838 SPANXCQ9NY87 97 aa9.45□□□□□ -0.9
DDX11-223ENST00000542838 ICOSQ9Y6W8 199 aa9.45□□□□□ -0.9
DDX11-223ENST00000542838 SNCGO76070 127 aa9.45□□□□□ -0.9
DDX11-223ENST00000542838 B4DSR2 109 aa9.45□□□□□ -0.9
DDX11-223ENST00000542838 PRM2P04554 102 aa9.45□□□□□ -0.9
DDX11-223ENST00000542838 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms