RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 XKRY2A2RUG3 117 aa13.39□□□□□ -0.27
DDB1-220ENST00000542337 GNG4P50150 75 aa13.39□□□□□ -0.27
DDB1-220ENST00000542337 WFDC2Q14508 124 aa13.39□□□□□ -0.27
DDB1-220ENST00000542337 TCTE3Q8IZS6 198 aa13.39□□□□□ -0.27
DDB1-220ENST00000542337 SMIM12Q96EX1 92 aa13.39□□□□□ -0.27
DDB1-220ENST00000542337 TPPP3Q9BW30 176 aa13.39□□□□□ -0.27
DDB1-220ENST00000542337 BIN3Q9NQY0 253 aa13.39□□□□□ -0.27
DDB1-220ENST00000542337 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.38□□□□□ -0.27
DDB1-220ENST00000542337 MEF2BQ02080 365 aaPredicted RBP13.38□□□□□ -0.27
DDB1-220ENST00000542337 FER1L6-AS1Q8NA97 138 aa13.38□□□□□ -0.27
DDB1-220ENST00000542337 OR2D3Q8NGH3 330 aa13.38□□□□□ -0.27
DDB1-220ENST00000542337 CRPP02741 224 aa13.37□□□□□ -0.27
DDB1-220ENST00000542337 SLC51BQ86UW2 128 aa13.37□□□□□ -0.27
DDB1-220ENST00000542337 CHCHD5Q9BSY4 110 aa13.37□□□□□ -0.27
DDB1-220ENST00000542337 MED9Q9NWA0 146 aa13.37□□□□□ -0.27
DDB1-220ENST00000542337 RAB19A4D1S5 217 aa13.36□□□□□ -0.27
DDB1-220ENST00000542337 P01737 135 aa13.36□□□□□ -0.27
DDB1-220ENST00000542337 CACNG7P62955 275 aa13.36□□□□□ -0.27
DDB1-220ENST00000542337 HAMPP81172 84 aa13.36□□□□□ -0.27
DDB1-220ENST00000542337 H7C1H1 209 aa13.35□□□□□ -0.27
DDB1-220ENST00000542337 GZMBP10144 247 aa13.35□□□□□ -0.27
DDB1-220ENST00000542337 TAGLN2P37802 199 aaKnown RBP13.35□□□□□ -0.27
DDB1-220ENST00000542337 C15orf54Q8N8G6 183 aa13.35□□□□□ -0.27
DDB1-220ENST00000542337 C1orf43Q9BWL3 253 aa13.35□□□□□ -0.27
DDB1-220ENST00000542337 F2Z2F3 143 aa13.34□□□□□ -0.27
DDB1-220ENST00000542337 ANGP03950 147 aaKnown RBP13.34□□□□□ -0.27
DDB1-220ENST00000542337 MGPP08493 103 aa13.34□□□□□ -0.27
DDB1-220ENST00000542337 DNAJC30Q96LL9 226 aa13.34□□□□□ -0.27
DDB1-220ENST00000542337 FAM30AQ9NZY2 134 aa13.34□□□□□ -0.27
DDB1-220ENST00000542337 VAX2Q9UIW0 290 aa13.34□□□□□ -0.27
DDB1-220ENST00000542337 KIF25-AS1Q9Y6Z4 181 aa13.34□□□□□ -0.27
DDB1-220ENST00000542337 IGLV2-8P01709 118 aa13.33□□□□□ -0.28
DDB1-220ENST00000542337 BCL2P10415 239 aa13.33□□□□□ -0.28
DDB1-220ENST00000542337 C14orf177Q52M58 125 aa13.33□□□□□ -0.28
DDB1-220ENST00000542337 ATRAIDQ6UW56 229 aa13.33□□□□□ -0.28
DDB1-220ENST00000542337 FAT1Q14517 4588 aa13.33□□□□□ -0.28
DDB1-220ENST00000542337 C19orf71A6NCJ1 209 aa13.32□□□□□ -0.28
DDB1-220ENST00000542337 IGLC6P0CF74 106 aa13.32□□□□□ -0.28
DDB1-220ENST00000542337 TRBV25-1A0A075B6N4 114 aa13.31□□□□□ -0.28
DDB1-220ENST00000542337 TRGC1P0CF51 173 aa13.31□□□□□ -0.28
DDB1-220ENST00000542337 MPV17L2Q567V2 206 aa13.31□□□□□ -0.28
DDB1-220ENST00000542337 ENHOQ6UWT2 76 aa13.3□□□□□ -0.28
DDB1-220ENST00000542337 M0QY20 66 aa13.29□□□□□ -0.28
DDB1-220ENST00000542337 MIAQ16674 131 aa13.29□□□□□ -0.28
DDB1-220ENST00000542337 IGHV1-24A0A0C4DH33 117 aa13.28□□□□□ -0.28
DDB1-220ENST00000542337 GAGE6Q13070 117 aa13.28□□□□□ -0.28
DDB1-220ENST00000542337 SUMO4Q6EEV6 95 aa13.28□□□□□ -0.28
DDB1-220ENST00000542337 LYZL1Q6UWQ5 148 aa13.28□□□□□ -0.28
DDB1-220ENST00000542337 Q6ZSA8 131 aa13.28□□□□□ -0.28
DDB1-220ENST00000542337 NTM-AS1Q6ZSK4 140 aa13.28□□□□□ -0.28
DDB1-220ENST00000542337 VPS13BQ7Z7G8 4022 aa13.28□□□□□ -0.28
DDB1-220ENST00000542337 PLA2G1BP04054 148 aaKnown RBP13.27□□□□□ -0.29
DDB1-220ENST00000542337 WDR73Q6P4I2 378 aa13.27□□□□□ -0.29
DDB1-220ENST00000542337 DPH3P1Q9H4G8 78 aa13.27□□□□□ -0.29
DDB1-220ENST00000542337 TRBV20OR9-2A0A075B6H5 130 aa13.26□□□□□ -0.29
DDB1-220ENST00000542337 NTF3P20783 257 aa13.26□□□□□ -0.29
DDB1-220ENST00000542337 RBX1P62877 108 aa13.26□□□□□ -0.29
DDB1-220ENST00000542337 IQCJQ1A5X6 159 aa13.26□□□□□ -0.29
DDB1-220ENST00000542337 RASL11AQ6T310 242 aa13.26□□□□□ -0.29
DDB1-220ENST00000542337 AKAP14Q86UN6 197 aa13.26□□□□□ -0.29
DDB1-220ENST00000542337 C9orf62Q8N4C0 152 aa13.26□□□□□ -0.29
DDB1-220ENST00000542337 NUDT10Q8NFP7 164 aa13.26□□□□□ -0.29
DDB1-220ENST00000542337 NUDT11Q96G61 164 aa13.26□□□□□ -0.29
DDB1-220ENST00000542337 HLA-DQA1P01909 254 aa13.25□□□□□ -0.29
DDB1-220ENST00000542337 NKX2-5P52952 324 aaPredicted RBP13.25□□□□□ -0.29
DDB1-220ENST00000542337 LINC01620Q4KN68 170 aa13.25□□□□□ -0.29
DDB1-220ENST00000542337 Q6ZNX1 250 aa13.25□□□□□ -0.29
DDB1-220ENST00000542337 SRRM2Q9UQ35 2752 aaKnown RBP13.24□□□□□ -0.29
DDB1-220ENST00000542337 BLOC1S1P78537 153 aa13.24□□□□□ -0.29
DDB1-220ENST00000542337 TWIST1Q15672 202 aa13.24□□□□□ -0.29
DDB1-220ENST00000542337 LINC00269Q8N2A0 174 aa13.24□□□□□ -0.29
DDB1-220ENST00000542337 RPP21Q9H633 154 aaKnown RBP13.24□□□□□ -0.29
DDB1-220ENST00000542337 NIT2Q9NQR4 276 aa13.24□□□□□ -0.29
DDB1-220ENST00000542337 DNAH8Q96JB1 4490 aa13.23□□□□□ -0.29
DDB1-220ENST00000542337 TMEM243Q9BU79 118 aa13.23□□□□□ -0.29
DDB1-220ENST00000542337 PRR34Q9NV39 138 aa13.23□□□□□ -0.29
DDB1-220ENST00000542337 CTRLP40313 264 aa13.22□□□□□ -0.29
DDB1-220ENST00000542337 CLPSL2Q6UWE3 100 aa13.22□□□□□ -0.29
DDB1-220ENST00000542337 SMIM15Q7Z3B0 74 aa13.22□□□□□ -0.29
DDB1-220ENST00000542337 LINC00528Q8N1L1 170 aa13.22□□□□□ -0.29
DDB1-220ENST00000542337 OCC1Q8TAD7 63 aa13.22□□□□□ -0.29
DDB1-220ENST00000542337 USP17L23D6RBM5 183 aa13.21□□□□□ -0.29
DDB1-220ENST00000542337 UBE2L6O14933 153 aa13.21□□□□□ -0.29
DDB1-220ENST00000542337 CHAC1Q9BUX1 264 aa13.21□□□□□ -0.29
DDB1-220ENST00000542337 RNASE7Q9H1E1 156 aaKnown RBP13.21□□□□□ -0.29
DDB1-220ENST00000542337 PGLYRP4Q96LB8 373 aa13.2□□□□□ -0.3
DDB1-220ENST00000542337 TMEM250H0YL14 139 aa13.19□□□□□ -0.3
DDB1-220ENST00000542337 REG3AQ06141 175 aa13.19□□□□□ -0.3
DDB1-220ENST00000542337 COTL1Q14019 142 aa13.19□□□□□ -0.3
DDB1-220ENST00000542337 DGAT2L7PQ6IED9 249 aa13.19□□□□□ -0.3
DDB1-220ENST00000542337 ALKAL2Q6UX46 152 aa13.19□□□□□ -0.3
DDB1-220ENST00000542337 SCXQ7RTU7 201 aa13.19□□□□□ -0.3
DDB1-220ENST00000542337 CNFNQ9BYD5 112 aa13.19□□□□□ -0.3
DDB1-220ENST00000542337 hCG_2014768A0A024R1R8 64 aa13.18□□□□□ -0.3
DDB1-220ENST00000542337 TRAV8-4A0A0B4J246 113 aa13.18□□□□□ -0.3
DDB1-220ENST00000542337 A0A1B0GUV1 79 aa13.18□□□□□ -0.3
DDB1-220ENST00000542337 K7EN84 100 aa13.18□□□□□ -0.3
DDB1-220ENST00000542337 GATCO43716 136 aaKnown RBP13.17□□□□□ -0.3
DDB1-220ENST00000542337 AMTP48728 403 aa13.17□□□□□ -0.3
DDB1-220ENST00000542337 DMBT1Q9UGM3 2413 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms