RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 FCER1GP30273 86 aa6.08□□□□□ -1.44
CHD4-208ENST00000540960 LINC00310P59036 64 aa6.08□□□□□ -1.44
CHD4-208ENST00000540960 SSTP61278 116 aa6.08□□□□□ -1.44
CHD4-208ENST00000540960 LAGE3Q14657 143 aa6.08□□□□□ -1.44
CHD4-208ENST00000540960 Q6ZWC4 215 aa6.08□□□□□ -1.44
CHD4-208ENST00000540960 TRPT1Q86TN4 253 aaKnown RBP6.08□□□□□ -1.44
CHD4-208ENST00000540960 Q8N1Y9 231 aa6.08□□□□□ -1.44
CHD4-208ENST00000540960 VAMP8Q9BV40 100 aa6.08□□□□□ -1.44
CHD4-208ENST00000540960 IGHV1-24A0A0C4DH33 117 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 MUC21A0A0G2JKD1 596 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 MUC21A0A140T8X8 626 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 F5H697 171 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 VCYO14598 125 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 NUPR1O60356 82 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 NPYP01303 97 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 IFI27P40305 119 aaPredicted RBP6.07□□□□□ -1.44
CHD4-208ENST00000540960 SUMO2P61956 95 aaKnown RBP6.07□□□□□ -1.44
CHD4-208ENST00000540960 LGALS9BQ3B8N2 356 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 ODF3L2Q3SX64 289 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 ZNF876PQ49A33 203 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 C14orf178Q8N769 122 aaPredicted RBP6.07□□□□□ -1.44
CHD4-208ENST00000540960 KIR2DL4Q99706 377 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 ST20Q9HBF5 79 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 C19orf73Q9NVV2 129 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 MSRB1Q9NZV6 116 aa6.07□□□□□ -1.44
CHD4-208ENST00000540960 DNAH17Q9UFH2 4485 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 TRAV12-2A0A075B6T6 113 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 TRBV6-5A0A0K0K1A5 114 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 LOC389332A0A1B0GUA5 103 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 SYS1-DBNDD2H3BUS1 97 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 MGPP08493 103 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 C3orf79P0CE67 100 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 PRB4P10163 310 aaPredicted RBP6.06□□□□□ -1.44
CHD4-208ENST00000540960 DEFB1P60022 68 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 SMAGPQ0VAQ4 97 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 ZFP2Q6ZN57 461 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 TEX43Q6ZNM6 134 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 Q8N1X5 172 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 FAM19A2Q8N3H0 131 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 SMIM2Q9BVW6 85 aa6.06□□□□□ -1.44
CHD4-208ENST00000540960 SMIM9A6NGZ8 99 aa6.05□□□□□ -1.44
CHD4-208ENST00000540960 MRPL52Q86TS9 123 aaKnown RBP6.05□□□□□ -1.44
CHD4-208ENST00000540960 NRACQ8N912 160 aa6.05□□□□□ -1.44
CHD4-208ENST00000540960 TMEM263Q8WUH6 116 aaKnown RBP6.05□□□□□ -1.44
CHD4-208ENST00000540960 C16orf74Q96GX8 76 aa6.05□□□□□ -1.44
CHD4-208ENST00000540960 DNAJC30Q96LL9 226 aa6.05□□□□□ -1.44
CHD4-208ENST00000540960 TRAV9-2A0A087WT02 112 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 KIR2DL5BA0A0G2JN68 375 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 KIR2DL5BA0A0G2JPC4 375 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 PCP4L1A6NKN8 68 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 NUDT3O95989 172 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 APOC4P55056 127 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 PAPPA-AS1Q5QFB9 102 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 LGALS9CQ6DKI2 356 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 KIR2DL5AQ8N109 375 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 KIR2DL5BQ8NHK3 375 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 IFI27L1Q96BM0 104 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 MDFICQ9P1T7 246 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 SELENOKQ9Y6D0 94 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 KIF25-AS1Q9Y6Z4 181 aa6.04□□□□□ -1.44
CHD4-208ENST00000540960 APOBP04114 4563 aaKnown RBP6.03□□□□□ -1.44
CHD4-208ENST00000540960 NCR2O95944 276 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 DAZ2Q13117 558 aaKnown RBP6.03□□□□□ -1.44
CHD4-208ENST00000540960 KIR3DS1Q14943 382 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 RHOHQ15669 191 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 ZNF56Q15929 161 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 RRN3P1Q2M238 152 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 ZNF705AQ6ZN79 300 aaPredicted RBP6.03□□□□□ -1.44
CHD4-208ENST00000540960 LINC00336Q6ZUF6 198 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 RASL10AQ92737 203 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 URB1-AS1Q96HZ7 61 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 PMCHL2Q9BQD1 86 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 CSTL1Q9H114 145 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 XCL2Q9UBD3 114 aa6.03□□□□□ -1.44
CHD4-208ENST00000540960 TRBV27A0A0K0K1C4 114 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 PRSS29PA6NIE9 313 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 SMKR1H3BMG3 65 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.02□□□□□ -1.45
CHD4-208ENST00000540960 NPSP0C0P6 89 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 HTN1P15515 57 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 FXYD7P58549 80 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 LBHQ53QV2 105 aaPredicted RBP6.02□□□□□ -1.45
CHD4-208ENST00000540960 LINC01545Q5VT33 79 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 SUMO4Q6EEV6 95 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 Q6ZN92 141 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 TMEM141Q96I45 108 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 CYSLTR1Q9Y271 337 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 TNFRSF18Q9Y5U5 241 aa6.02□□□□□ -1.45
CHD4-208ENST00000540960 IGLV2-18A0A075B6J9 118 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 TRBV10-1A0A0K0K1A3 114 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 I3L3M4 83 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 M0QY20 66 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 RS1O15537 224 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 CRYGDP07320 174 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 PRSS1P07477 247 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 DDTP30046 118 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 LINC00315P59091 139 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 FAM74A4Q5TZK3 123 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 Q6ZQT7 251 aa6.01□□□□□ -1.45
CHD4-208ENST00000540960 MIEN1Q9BRT3 115 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms