RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CRIP2	P52943	208 aa	Predicted RBP	4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	KRTAP1-1	Q07627	177 aa		4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TCTEX1D4	Q5JR98	221 aa		4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	PSMG4	Q5JS54	123 aa		4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		Q6ZUT4	128 aa		4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	COX8C	Q7Z4L0	72 aa		4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	SCGB1C2	P0DMR2	95 aa		4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	PRR9	Q5T870	116 aa		4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	SMIM2	Q9BVW6	85 aa		4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	NBEAL1	Q6ZS30	2694 aa		4.27	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		K7EMT4	169 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	BRI3	O95415	125 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	C2orf66	Q6UXQ4	117 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	GPHB5	Q86YW7	130 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	RASL10A	Q92737	203 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TCL1B	O95988	128 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	PROK1	P58294	105 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	KRTAP24-1	Q3LI83	254 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	CFAP161	Q6P656	301 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		Q6ZS46	218 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	FLNC	Q14315	2725 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	BUB3	O43684	328 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	S100A4	P26447	101 aa	Known RBP	4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	STH	Q8IWL8	128 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	NEXN-AS1	Q8NBZ9	246 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	BAALC	Q8WXS3	180 aa		4.26	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TRAV8-2	A0A0B4J237	113 aa		4.25	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	APOC4	P55056	127 aa		4.25	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	SUMO2	P61956	95 aa	Known RBP	4.25	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	RHPN1-AS1	Q9BWJ2	59 aa		4.25	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ESM1	Q9NQ30	184 aa		4.25	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	C11orf86	A6NJI1	115 aa		4.25	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ANAPC13	Q9BS18	74 aa		4.25	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	IGHV3-64	A0A075B6Q5	118 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		B5MCH6	92 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	LGALS9	O00182	355 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	GNRH2	O43555	120 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	RPL39	P62891	51 aa	Known RBP	4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TRPT1	Q86TN4	253 aa	Known RBP	4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ANKRD29	Q8N6D5	301 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TOMM6	Q96B49	74 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	STAB1	Q9NY15	2570 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ZFHX3	Q15911	3703 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TRBV20-1	A0A075B6N2	111 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TRAV12-1	A0A0B4J245	112 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		A6NJY4	79 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		F6UB75	175 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	PSMB8	P28062	276 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	UBE2D1	P51668	147 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	SRSF2	Q01130	221 aa	Known RBP	4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TMEM170B	Q5T4T1	132 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	PPDPFL	Q8WWR9	84 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		A8MWV9	139 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	IGLV1-40	P01703	118 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	CD7	P09564	240 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	CFC1B	P0CG36	223 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	CFC1	P0CG37	223 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TSPEAR-AS2	P59090	65 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ORMDL2	Q53FV1	153 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TEN1	Q86WV5	123 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	JPT2	Q9H910	190 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	PHLDA3	Q9Y5J5	127 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ITPR2	Q14571	2701 aa		4.24	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	IGHV4OR15-8	A0A075B7B6	117 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		A0A087WW49	117 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		C9JAW5	83 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	C20orf173	Q96LM9	149 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ZFAND3	Q9H8U3	227 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		A0A0J9YY99	117 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	CRYGD	P07320	174 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	RNASE4	P34096	147 aa	Known RBP	4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	UBE2D3	P61077	147 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	UBE2D2	P62837	147 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	OPRPN	Q99935	248 aa	Predicted RBP	4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TSHB	P01222	138 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	SLURP1	P55000	103 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ERG28	Q9UKR5	140 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TP53TG1	Q9Y2A0	90 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	SORL1	Q92673	2214 aa		4.23	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		A0A087WWL8	130 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		F5H697	171 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ZNF688	P0C7X2	276 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ATP6V0E2	Q8NHE4	81 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	CCDC140	Q96MF4	163 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	MAP1A	P78559	2803 aa	Predicted RBP	4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	DEFB136	Q30KP8	78 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	ZFAND6	Q6FIF0	208 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	IL17D	Q8TAD2	202 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TRAV2	A0A0B4J234	112 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	RBAKDN	A6NC62	111 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	DPH3P1	Q9H4G8	78 aa		4.22	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	IGLV4-69	A0A075B6H9	119 aa		4.21	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	TRAV4	A0A0B4J268	109 aa		4.21	□□□□□ -1.73
RAPGEF4-215	ENST00000540783	SLC25A20	O43772	301 aa		4.21	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		Q1RN00	199 aa		4.21	□□□□□ -1.73
RAPGEF4-215	ENST00000540783		A4D1N5	150 aa		4.21	□□□□□ -1.74
RAPGEF4-215	ENST00000540783	ADARB2-AS1	A8MUL3	147 aa		4.21	□□□□□ -1.74
RAPGEF4-215	ENST00000540783	IGHV3-30	P01768	117 aa		4.21	□□□□□ -1.74

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