RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 GCHFRP30047 84 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 UBE2D1P51668 147 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 MRPS10P82664 201 aaKnown RBP0.36□□□□□ -2.35
MDM2-227ENST00000540709 Q6AWC8 147 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 SPATA8Q6RVD6 105 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 C8orf59Q8N0T1 100 aaPredicted RBP0.36□□□□□ -2.35
MDM2-227ENST00000540709 SVBPQ8N300 66 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 TTC9CQ8N5M4 171 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 Q8N8P6 123 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 SMIM11BQ8TCY0 68 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 TMEM203Q969S6 136 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 BPESC1Q9GZL8 116 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 CNTRLQ7Z7A1 2325 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 KTN1Q86UP2 1357 aaKnown RBP0.35□□□□□ -2.35
MDM2-227ENST00000540709 RBBP6Q7Z6E9 1792 aaKnown RBP0.35□□□□□ -2.35
MDM2-227ENST00000540709 A0A096LNT2 108 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 TRAV1-2A0A0B4J238 106 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 CTXND1A0A1B0GTU2 59 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 SPAARA0A1B0GVQ0 90 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 LINC00587B1AMM8 73 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 PPP3R1P63098 170 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 BTG2P78543 158 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 SPAG11BQ08648 103 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 WHAMMP3Q1A5X7 153 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 SPAG11AQ6PDA7 123 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 Q6ZRX8 168 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 VMO1Q7Z5L0 202 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 BAGE3Q86Y29 109 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 MYOZ3Q8TDC0 251 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 C2orf88Q9BSF0 95 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 R4GMQ9 66 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 CFTRP13569 1480 aa0.35□□□□□ -2.35
MDM2-227ENST00000540709 A0A087WTM6 91 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 GVQW2A0A096LPI5 108 aaPredicted RBP0.34□□□□□ -2.36
MDM2-227ENST00000540709 C20orf202A1L168 122 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 TMEM14DPA8MWL7 114 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 CORTO00230 105 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 ADGRB1O14514 1584 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 PLXNA2O75051 1894 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 GNG4P50150 75 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 CFAP126Q5VTH2 177 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 MYOM3Q5VTT5 1437 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 GTF2H5Q6ZYL4 71 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 CASKIN1Q8WXD9 1431 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 Q96NJ1 140 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 WFDC6Q9BQY6 131 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 FAM103A1Q9BTL3 118 aaKnown RBP0.34□□□□□ -2.36
MDM2-227ENST00000540709 V9GYH0 126 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 SPAG17Q6Q759 2223 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 MUC22E2RYF6 1773 aaPredicted RBP0.34□□□□□ -2.36
MDM2-227ENST00000540709 IFT140Q96RY7 1462 aa0.34□□□□□ -2.36
MDM2-227ENST00000540709 MUC5BQ9HC84 5762 aaPredicted RBP0.34□□□□□ -2.36
MDM2-227ENST00000540709 MYH7P12883 1935 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 SMG6Q86US8 1419 aaKnown RBP0.33□□□□□ -2.36
MDM2-227ENST00000540709 CLPSL1A2RUU4 121 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 OOSP1A8MZH6 123 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 M0R135 149 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 SSSCA1O60232 199 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 TNFP01375 233 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 NMBP08949 121 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 IFITM1P13164 125 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 S100PP25815 95 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 SNCAP37840 140 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 GNG11P61952 73 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 ESPL1Q14674 2120 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 COMMD6Q7Z4G1 85 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 C5orf38Q86SI9 138 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 UBE2DNLQ8IWF7 75 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 TSLPQ969D9 159 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 SPANXDQ9BXN6 97 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 CYP4F30PQ9H0H9 118 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 C10orf95Q9H7T3 257 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 NRXN2Q9P2S2 1712 aa0.33□□□□□ -2.36
MDM2-227ENST00000540709 MYH9P35579 1960 aaKnown RBP0.32□□□□□ -2.36
MDM2-227ENST00000540709 PPIP5K1Q6PFW1 1433 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 TRBV7-3A0A075B6L6 115 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 UBE2L5PA0A1B0GUS4 154 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 CHKB-CPT1BH3BT56 60 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 UBE2L3P68036 154 aaKnown RBP0.32□□□□□ -2.36
MDM2-227ENST00000540709 HAMPP81172 84 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 DCDP81605 110 aaKnown RBP0.32□□□□□ -2.36
MDM2-227ENST00000540709 COX6A2Q02221 97 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 TMEM170BQ5T4T1 132 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 SMIM4Q8WVI0 70 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 MGST2Q99735 147 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 DYNLRB1Q9NP97 96 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 MANBALQ9NQG1 85 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 LINC00474Q9P2X8 69 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 UQCR10Q9UDW1 63 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 LENEPQ9Y5L5 61 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 IER3IP1Q9Y5U9 82 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 MBD5Q9P267 1494 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 AKAP11Q9UKA4 1901 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 ARAP2Q8WZ64 1704 aa0.32□□□□□ -2.36
MDM2-227ENST00000540709 FOCADQ5VW36 1801 aa0.31□□□□□ -2.36
MDM2-227ENST00000540709 PHIPQ8WWQ0 1821 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms