RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 B4DSR2 109 aa10.49□□□□□ -0.73
INO80E-203ENST00000540562 C20orf78Q9BR46 151 aa10.49□□□□□ -0.73
INO80E-203ENST00000540562 IGLV1-40P01703 118 aa10.48□□□□□ -0.73
INO80E-203ENST00000540562 FOXI2Q6ZQN5 318 aa10.48□□□□□ -0.73
INO80E-203ENST00000540562 HOXD3P31249 432 aaPredicted RBP10.48□□□□□ -0.73
INO80E-203ENST00000540562 SNRPD3P62318 126 aaKnown RBP10.48□□□□□ -0.73
INO80E-203ENST00000540562 APRG1Q8IVJ8 170 aa10.48□□□□□ -0.73
INO80E-203ENST00000540562 APCP25054 2843 aa10.48□□□□□ -0.73
INO80E-203ENST00000540562 IGLV4-69A0A075B6H9 119 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 E9PLD3 99 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 DEFB131AP59861 70 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 KRTAP10-9P60411 292 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 KIF25-AS1Q9Y6Z4 181 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 TRAV2A0A0B4J234 112 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 KLLNB2CW77 178 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 RRN3P1Q2M238 152 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 LENEPQ9Y5L5 61 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 A0A0J9YXV3 536 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 GAGE13Q4V321 117 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 MORN3Q6PF18 240 aaPredicted RBP10.47□□□□□ -0.73
INO80E-203ENST00000540562 SPXQ9BT56 116 aa10.47□□□□□ -0.73
INO80E-203ENST00000540562 RBMY1A1P0DJD3 496 aaKnown RBP10.46□□□□□ -0.73
INO80E-203ENST00000540562 RBMY1CP0DJD4 496 aa10.46□□□□□ -0.73
INO80E-203ENST00000540562 PSMB8P28062 276 aa10.46□□□□□ -0.73
INO80E-203ENST00000540562 RBMY1FQ15415 496 aaKnown RBP10.46□□□□□ -0.73
INO80E-203ENST00000540562 SCGB1C2P0DMR2 95 aa10.46□□□□□ -0.74
INO80E-203ENST00000540562 A0A0U1RRA0 63 aa10.45□□□□□ -0.74
INO80E-203ENST00000540562 TCTEX1D4Q5JR98 221 aa10.45□□□□□ -0.74
INO80E-203ENST00000540562 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
INO80E-203ENST00000540562 SETXQ7Z333 2677 aaKnown RBP10.45□□□□□ -0.74
INO80E-203ENST00000540562 TRAV12-1A0A0B4J245 112 aa10.45□□□□□ -0.74
INO80E-203ENST00000540562 A0A0J9YX75 114 aa10.45□□□□□ -0.74
INO80E-203ENST00000540562 VCYO14598 125 aa10.45□□□□□ -0.74
INO80E-203ENST00000540562 PMVKQ15126 192 aa10.45□□□□□ -0.74
INO80E-203ENST00000540562 GCN1Q92616 2671 aaKnown RBP10.44□□□□□ -0.74
INO80E-203ENST00000540562 TRAV8-3A0A0A6YYJ7 113 aa10.44□□□□□ -0.74
INO80E-203ENST00000540562 SPAG8Q99932 426 aaPredicted RBP10.44□□□□□ -0.74
INO80E-203ENST00000540562 IGHV1OR15-1A0A075B7D0 117 aa10.44□□□□□ -0.74
INO80E-203ENST00000540562 IGIPA6NJ69 53 aa10.44□□□□□ -0.74
INO80E-203ENST00000540562 PRSS2P07478 247 aa10.44□□□□□ -0.74
INO80E-203ENST00000540562 POLR2KP53803 58 aaKnown RBP10.44□□□□□ -0.74
INO80E-203ENST00000540562 LGALS3P17931 250 aaKnown RBP10.43□□□□□ -0.74
INO80E-203ENST00000540562 AZU1P20160 251 aa10.43□□□□□ -0.74
INO80E-203ENST00000540562 HIST2H2BCQ6DN03 193 aa10.43□□□□□ -0.74
INO80E-203ENST00000540562 SPANXB1Q9NS25 103 aaPredicted RBP10.43□□□□□ -0.74
INO80E-203ENST00000540562 ITPR2Q14571 2701 aa10.43□□□□□ -0.74
INO80E-203ENST00000540562 TSPAN13O95857 204 aa10.43□□□□□ -0.74
INO80E-203ENST00000540562 M0QY20 66 aa10.42□□□□□ -0.74
INO80E-203ENST00000540562 KLK9Q2XQG4 91 aa10.42□□□□□ -0.74
INO80E-203ENST00000540562 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.42□□□□□ -0.74
INO80E-203ENST00000540562 IGKV2-29A2NJV5 120 aaPredicted RBP10.42□□□□□ -0.74
INO80E-203ENST00000540562 Q1RN00 199 aa10.42□□□□□ -0.74
INO80E-203ENST00000540562 IGHV3-53P01767 116 aa10.42□□□□□ -0.74
INO80E-203ENST00000540562 HERVK_113P61574 105 aa10.42□□□□□ -0.74
INO80E-203ENST00000540562 DAND5Q8N907 189 aa10.42□□□□□ -0.74
INO80E-203ENST00000540562 UBE2E2Q96LR5 201 aa10.42□□□□□ -0.74
INO80E-203ENST00000540562 A0A0J9YY99 117 aa10.41□□□□□ -0.74
INO80E-203ENST00000540562 J3QQQ9 107 aa10.41□□□□□ -0.74
INO80E-203ENST00000540562 CRIP2P52943 208 aaPredicted RBP10.41□□□□□ -0.74
INO80E-203ENST00000540562 CFHR3Q02985 330 aa10.41□□□□□ -0.74
INO80E-203ENST00000540562 Q6ZSV7 163 aa10.41□□□□□ -0.74
INO80E-203ENST00000540562 TMEM238C9JI98 176 aa10.41□□□□□ -0.74
INO80E-203ENST00000540562 K7EQG2 157 aa10.4□□□□□ -0.74
INO80E-203ENST00000540562 CD28P10747 220 aa10.4□□□□□ -0.74
INO80E-203ENST00000540562 Q6ZSN1 163 aa10.4□□□□□ -0.74
INO80E-203ENST00000540562 COX6B1P14854 86 aa10.4□□□□□ -0.74
INO80E-203ENST00000540562 TMEM61Q8N0U2 210 aa10.4□□□□□ -0.74
INO80E-203ENST00000540562 SYT8Q8NBV8 401 aa10.4□□□□□ -0.74
INO80E-203ENST00000540562 XCL2Q9UBD3 114 aa10.4□□□□□ -0.74
INO80E-203ENST00000540562 SAMD13Q5VXD3 122 aa10.39□□□□□ -0.75
INO80E-203ENST00000540562 ZNF625Q96I27 306 aaPredicted RBP10.39□□□□□ -0.75
INO80E-203ENST00000540562 VCX2Q9H322 139 aa10.39□□□□□ -0.75
INO80E-203ENST00000540562 A4D1N5 150 aa10.39□□□□□ -0.75
INO80E-203ENST00000540562 TRPT1Q86TN4 253 aaKnown RBP10.39□□□□□ -0.75
INO80E-203ENST00000540562 GAGE12HA6NDE8 117 aa10.38□□□□□ -0.75
INO80E-203ENST00000540562 H3BUA1 57 aa10.38□□□□□ -0.75
INO80E-203ENST00000540562 NDUFS8O00217 210 aa10.38□□□□□ -0.75
INO80E-203ENST00000540562 LINC01356Q8N9X3 169 aa10.38□□□□□ -0.75
INO80E-203ENST00000540562 CFC1BP0CG36 223 aa10.38□□□□□ -0.75
INO80E-203ENST00000540562 CFC1P0CG37 223 aa10.38□□□□□ -0.75
INO80E-203ENST00000540562 LINC01587Q99440 93 aa10.38□□□□□ -0.75
INO80E-203ENST00000540562 TCL1BO95988 128 aa10.37□□□□□ -0.75
INO80E-203ENST00000540562 SMCPP49901 116 aaPredicted RBP10.37□□□□□ -0.75
INO80E-203ENST00000540562 RBMY1BA6NDE4 496 aaKnown RBP10.37□□□□□ -0.75
INO80E-203ENST00000540562 RBMY1EA6NEQ0 496 aaKnown RBP10.37□□□□□ -0.75
INO80E-203ENST00000540562 PPP1R17O96001 155 aa10.37□□□□□ -0.75
INO80E-203ENST00000540562 RBMY1DP0C7P1 496 aaKnown RBP10.37□□□□□ -0.75
INO80E-203ENST00000540562 NFE4Q86UQ8 179 aa10.37□□□□□ -0.75
INO80E-203ENST00000540562 NDUFA11Q86Y39 141 aa10.37□□□□□ -0.75
INO80E-203ENST00000540562 F8W1H4 67 aa10.37□□□□□ -0.75
INO80E-203ENST00000540562 SPINK8P0C7L1 97 aa10.37□□□□□ -0.75
INO80E-203ENST00000540562 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
INO80E-203ENST00000540562 TRBV27A0A0K0K1C4 114 aa10.36□□□□□ -0.75
INO80E-203ENST00000540562 TMEM238LA0A1B0GVL6 79 aa10.36□□□□□ -0.75
INO80E-203ENST00000540562 A6NJY4 79 aa10.36□□□□□ -0.75
INO80E-203ENST00000540562 TAL2Q16559 108 aa10.36□□□□□ -0.75
INO80E-203ENST00000540562 BBC3Q96PG8 261 aaPredicted RBP10.36□□□□□ -0.75
INO80E-203ENST00000540562 HECTD1Q9ULT8 2610 aa10.36□□□□□ -0.75
INO80E-203ENST00000540562 MUSTN1Q8IVN3 82 aa10.36□□□□□ -0.75
INO80E-203ENST00000540562 DYNLRB2Q8TF09 96 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms