RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 VAX2Q9UIW0 290 aa7.74□□□□□ -1.17
CBX3P4-202ENST00000540428 SPANXN1Q5VSR9 72 aa7.73□□□□□ -1.17
CBX3P4-202ENST00000540428 NTM-AS1Q6ZSK4 140 aa7.73□□□□□ -1.17
CBX3P4-202ENST00000540428 CLRN3Q8NCR9 226 aa7.73□□□□□ -1.17
CBX3P4-202ENST00000540428 DAZAP1Q96EP5 407 aaKnown RBP7.73□□□□□ -1.17
CBX3P4-202ENST00000540428 MLST8Q9BVC4 326 aa7.73□□□□□ -1.17
CBX3P4-202ENST00000540428 RBX1P62877 108 aa7.72□□□□□ -1.17
CBX3P4-202ENST00000540428 KRTAP26-1Q6PEX3 210 aa7.72□□□□□ -1.17
CBX3P4-202ENST00000540428 CYTL1Q9NRR1 136 aa7.72□□□□□ -1.17
CBX3P4-202ENST00000540428 TRBV25-1A0A075B6N4 114 aa7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 F5H697 171 aa7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 G3V3Q6 166 aa7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 PAGE4O60829 102 aa7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 HNRNPA3P51991 378 aaKnown RBP7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 IQCJQ1A5X6 159 aa7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 SDIM1Q6ZPB5 146 aa7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 BAGE2Q86Y30 109 aa7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 DERL1Q9BUN8 251 aa7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 KIF25-AS1Q9Y6Z4 181 aa7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.71□□□□□ -1.18
CBX3P4-202ENST00000540428 ARPC5O15511 151 aa7.7□□□□□ -1.18
CBX3P4-202ENST00000540428 PFDN1O60925 122 aa7.7□□□□□ -1.18
CBX3P4-202ENST00000540428 SMIM17P0DL12 118 aa7.7□□□□□ -1.18
CBX3P4-202ENST00000540428 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
CBX3P4-202ENST00000540428 CIRBPQ14011 172 aaKnown RBP7.7□□□□□ -1.18
CBX3P4-202ENST00000540428 LINC00269Q8N2A0 174 aa7.7□□□□□ -1.18
CBX3P4-202ENST00000540428 MBD3L1Q8WWY6 194 aa7.7□□□□□ -1.18
CBX3P4-202ENST00000540428 AP1S3Q96PC3 154 aa7.7□□□□□ -1.18
CBX3P4-202ENST00000540428 TRAV8-4A0A0B4J246 113 aa7.69□□□□□ -1.18
CBX3P4-202ENST00000540428 IGHV1-24A0A0C4DH33 117 aa7.69□□□□□ -1.18
CBX3P4-202ENST00000540428 A0A0D9SG52 128 aa7.69□□□□□ -1.18
CBX3P4-202ENST00000540428 SCO2A0A1W2PP80 73 aa7.69□□□□□ -1.18
CBX3P4-202ENST00000540428 UMAD1C9J7I0 102 aa7.69□□□□□ -1.18
CBX3P4-202ENST00000540428 P01737 135 aa7.69□□□□□ -1.18
CBX3P4-202ENST00000540428 GAGE6Q13070 117 aa7.69□□□□□ -1.18
CBX3P4-202ENST00000540428 CLPSL2Q6UWE3 100 aa7.69□□□□□ -1.18
CBX3P4-202ENST00000540428 Q6ZRU5 148 aa7.69□□□□□ -1.18
CBX3P4-202ENST00000540428 UBR4Q5T4S7 5183 aa7.68□□□□□ -1.18
CBX3P4-202ENST00000540428 PKHD1L1Q86WI1 4243 aa7.68□□□□□ -1.18
CBX3P4-202ENST00000540428 MUC21A0A0G2JKD1 596 aa7.68□□□□□ -1.18
CBX3P4-202ENST00000540428 MUC21A0A140T8X8 626 aa7.68□□□□□ -1.18
CBX3P4-202ENST00000540428 H7C1H1 209 aa7.68□□□□□ -1.18
CBX3P4-202ENST00000540428 PANO1I0J062 215 aa7.68□□□□□ -1.18
CBX3P4-202ENST00000540428 REG3AQ06141 175 aa7.68□□□□□ -1.18
CBX3P4-202ENST00000540428 SFT2D1Q8WV19 159 aa7.68□□□□□ -1.18
CBX3P4-202ENST00000540428 A0A1B0GUV1 79 aa7.67□□□□□ -1.18
CBX3P4-202ENST00000540428 M0QY20 66 aa7.67□□□□□ -1.18
CBX3P4-202ENST00000540428 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
CBX3P4-202ENST00000540428 GZMBP10144 247 aa7.67□□□□□ -1.18
CBX3P4-202ENST00000540428 ZNF345Q14585 488 aa7.67□□□□□ -1.18
CBX3P4-202ENST00000540428 TMUB2Q71RG4 321 aa7.67□□□□□ -1.18
CBX3P4-202ENST00000540428 C20orf203Q8NBC4 194 aa7.67□□□□□ -1.18
CBX3P4-202ENST00000540428 RNF185Q96GF1 192 aa7.67□□□□□ -1.18
CBX3P4-202ENST00000540428 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.66□□□□□ -1.18
CBX3P4-202ENST00000540428 KCNRGQ8N5I3 272 aa7.66□□□□□ -1.18
CBX3P4-202ENST00000540428 FAM213BQ8TBF2 198 aa7.66□□□□□ -1.18
CBX3P4-202ENST00000540428 AP5S1Q9NUS5 200 aa7.66□□□□□ -1.18
CBX3P4-202ENST00000540428 IGLV10-54A0A075B6I4 117 aa7.65□□□□□ -1.18
CBX3P4-202ENST00000540428 IGHV3-64A0A075B6Q5 118 aa7.65□□□□□ -1.18
CBX3P4-202ENST00000540428 hDV102S1A0JD36 115 aa7.65□□□□□ -1.18
CBX3P4-202ENST00000540428 IGLC6P0CF74 106 aa7.65□□□□□ -1.18
CBX3P4-202ENST00000540428 RPS20P60866 119 aaKnown RBP7.65□□□□□ -1.18
CBX3P4-202ENST00000540428 SSTP61278 116 aa7.65□□□□□ -1.18
CBX3P4-202ENST00000540428 PGLYRP4Q96LB8 373 aa7.65□□□□□ -1.18
CBX3P4-202ENST00000540428 TMEM243Q9BU79 118 aa7.65□□□□□ -1.18
CBX3P4-202ENST00000540428 A0A1B0GV50 99 aa7.64□□□□□ -1.19
CBX3P4-202ENST00000540428 MGPP08493 103 aa7.64□□□□□ -1.19
CBX3P4-202ENST00000540428 H2AFB1P0C5Y9 115 aa7.64□□□□□ -1.19
CBX3P4-202ENST00000540428 RPL35P42766 123 aaKnown RBP7.64□□□□□ -1.19
CBX3P4-202ENST00000540428 CACNG7P62955 275 aa7.64□□□□□ -1.19
CBX3P4-202ENST00000540428 SUMO4Q6EEV6 95 aa7.64□□□□□ -1.19
CBX3P4-202ENST00000540428 FER1L6-AS1Q8NA97 138 aa7.64□□□□□ -1.19
CBX3P4-202ENST00000540428 C11orf52Q96A22 123 aa7.64□□□□□ -1.19
CBX3P4-202ENST00000540428 IGLV4-60A0A075B6I1 120 aa7.63□□□□□ -1.19
CBX3P4-202ENST00000540428 A0A087WYN8 130 aa7.63□□□□□ -1.19
CBX3P4-202ENST00000540428 RASL11AQ6T310 242 aa7.63□□□□□ -1.19
CBX3P4-202ENST00000540428 SPACA4Q8TDM5 124 aa7.63□□□□□ -1.19
CBX3P4-202ENST00000540428 SMIM12Q96EX1 92 aa7.63□□□□□ -1.19
CBX3P4-202ENST00000540428 C19orf71A6NCJ1 209 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 HMSDA8MTL9 139 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 F2Z2F3 143 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 SLPIP03973 132 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 TRGC1P0CF51 173 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 NKX2-5P52952 324 aaPredicted RBP7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 EIF5AP63241 154 aaKnown RBP7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 WDR73Q6P4I2 378 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 OR2D3Q8NGH3 330 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 DPH3Q96FX2 82 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 TPPP3Q9BW30 176 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 GFRA4Q9GZZ7 299 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 MANBALQ9NQG1 85 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 NIT2Q9NQR4 276 aa7.62□□□□□ -1.19
CBX3P4-202ENST00000540428 XKRY2A2RUG3 117 aa7.61□□□□□ -1.19
CBX3P4-202ENST00000540428 UBE2L6O14933 153 aa7.61□□□□□ -1.19
CBX3P4-202ENST00000540428 BCL2L11O43521 198 aa7.61□□□□□ -1.19
CBX3P4-202ENST00000540428 CENPWQ5EE01 88 aa7.61□□□□□ -1.19
CBX3P4-202ENST00000540428 CFAP161Q6P656 301 aa7.61□□□□□ -1.19
CBX3P4-202ENST00000540428 DPH3P1Q9H4G8 78 aa7.61□□□□□ -1.19
CBX3P4-202ENST00000540428 PLAC8Q9NZF1 115 aa7.61□□□□□ -1.19
CBX3P4-202ENST00000540428 TRAV1-1A0A0B4J248 108 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms