RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 BUB1B-PAK6H3BSN5 160 aa6.65□□□□□ -1.35
DDB1-217ENST00000540166 H3BUX3 64 aa6.65□□□□□ -1.35
DDB1-217ENST00000540166 DPH3P1Q9H4G8 78 aa6.65□□□□□ -1.35
DDB1-217ENST00000540166 DPM3Q9P2X0 92 aa6.65□□□□□ -1.35
DDB1-217ENST00000540166 TP53TG1Q9Y2A0 90 aa6.65□□□□□ -1.35
DDB1-217ENST00000540166 TRGV11A0A075B6L2 103 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 IGHV3-49A0A0A0MS15 119 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 LINC01548A6NM66 108 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 KRTAP1-3Q8IUG1 177 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 BAALCQ8WXS3 180 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 LINC00574Q9H8X3 128 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 WNK1Q9H4A3 2382 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 DNAJC9-AS1A6NH13 148 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 ECSCRQ19T08 205 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 KRTAP21-3Q3LHN1 58 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 CFHR4Q92496 578 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 SPANXDQ9BXN6 97 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 A0A0J9YY99 117 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 A0A1W2PRX2 142 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 NBR2O15453 112 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 DUSP14O95147 198 aaKnown RBP6.64□□□□□ -1.35
DDB1-217ENST00000540166 IGHV4-38-2P0DP08 117 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 DEFB121Q5J5C9 76 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 DNAJC30Q96LL9 226 aa6.64□□□□□ -1.35
DDB1-217ENST00000540166 IGHG4P01861 327 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 LINC00694P0DN24 101 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 CELSR2Q9HCU4 2923 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 I3L2K1 104 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 NPC2P61916 151 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 TOMM6Q96B49 74 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 NBEAL1Q6ZS30 2694 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 C11orf86A6NJI1 115 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 MGAM2Q2M2H8 2515 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 DYNAPQ8N1N2 210 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 RNF182Q8N6D2 247 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 IGFBPL1Q8WX77 278 aa6.63□□□□□ -1.35
DDB1-217ENST00000540166 LGALS9O00182 355 aa6.62□□□□□ -1.35
DDB1-217ENST00000540166 MRPS12O15235 138 aaKnown RBP6.62□□□□□ -1.35
DDB1-217ENST00000540166 FAM74A4Q5TZK3 123 aa6.62□□□□□ -1.35
DDB1-217ENST00000540166 NEXN-AS1Q8NBZ9 246 aa6.62□□□□□ -1.35
DDB1-217ENST00000540166 ARHGAP32A7KAX9 2087 aa6.62□□□□□ -1.35
DDB1-217ENST00000540166 CRIP2P52943 208 aaPredicted RBP6.62□□□□□ -1.35
DDB1-217ENST00000540166 HERVK_113P63121 156 aa6.62□□□□□ -1.35
DDB1-217ENST00000540166 PAX8Q06710 450 aa6.62□□□□□ -1.35
DDB1-217ENST00000540166 MUSTN1Q8IVN3 82 aa6.62□□□□□ -1.35
DDB1-217ENST00000540166 CLPSL1A2RUU4 121 aa6.62□□□□□ -1.35
DDB1-217ENST00000540166 TRACP01848 142 aa6.62□□□□□ -1.35
DDB1-217ENST00000540166 SLC25A29Q8N8R3 303 aa6.62□□□□□ -1.35
DDB1-217ENST00000540166 CSDC2Q9Y534 153 aaKnown RBP6.62□□□□□ -1.35
DDB1-217ENST00000540166 CRYBG3Q68DQ2 2970 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 SMIM9A6NGZ8 99 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 UQCRQO14949 82 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 NDUFA7O95182 113 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 SAA4P35542 130 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 RPL39LQ96EH5 51 aaKnown RBP6.61□□□□□ -1.35
DDB1-217ENST00000540166 METTL26Q96S19 204 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 SPANXCQ9NY87 97 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 IGHV3-33P01772 117 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 IGKV3-7A0A075B6H7 116 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 H3BT86 120 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 K7EIM0 57 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 M0R1W7 72 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 C3orf22Q8N5N4 141 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 LINC00527Q9UJ94 153 aa6.61□□□□□ -1.35
DDB1-217ENST00000540166 TEX22C9J3V5 150 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 IGHV4-59P01825 116 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 TRAV21A0A0B4J279 112 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 OOSP1A8MZH6 123 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 VCYO14598 125 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 IGHV3-30P01768 117 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 ACYP1P07311 99 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 IGHV3-30-5P0DP03 117 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 RASL10AQ92737 203 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 TMEM141Q96I45 108 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 CIRBPQ14011 172 aaKnown RBP6.6□□□□□ -1.35
DDB1-217ENST00000540166 C8orf31Q8N9H6 132 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 WDFY3Q8IZQ1 3526 aa6.6□□□□□ -1.35
DDB1-217ENST00000540166 LOC107984640A0A0U1RRK4 108 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 SPRY2O43597 315 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 UBE2E1P51965 193 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 Q6ZS46 218 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 P0DMU3 169 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 FAM231AP0DMU4 169 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 FAM231CP0DMU5 169 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 NRACQ8N912 160 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 RNF5Q99942 180 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 AGPAT4-IT1Q9H0P7 198 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 LRBAP50851 2863 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 KAAG1Q9UBP8 84 aa6.59□□□□□ -1.35
DDB1-217ENST00000540166 SBSPONQ8IVN8 264 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 ICOSQ9Y6W8 199 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 A0A0B4J2C4 111 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 IGKV3D-20A0A0C4DH25 116 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 PRAC2D3DTV9 90 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 IGLV1-47P01700 117 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 RNASE4P34096 147 aaKnown RBP6.58□□□□□ -1.36
DDB1-217ENST00000540166 TMEM86BQ8N661 226 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 ODF3Q96PU9 254 aa6.58□□□□□ -1.36
DDB1-217ENST00000540166 CNFNQ9BYD5 112 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms