RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 PRR27Q6MZM9 219 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 NTM-AS1Q6ZSK4 140 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 C20orf203Q8NBC4 194 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 FXYD5Q96DB9 178 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 DIRAS2Q96HU8 199 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 PRRT1Q99946 306 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 GGACTQ9BVM4 153 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 TREM1Q9NP99 234 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 PYGO1Q9Y3Y4 419 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
C2CD3-214ENST00000540057 IGLV7-46A0A075B6I9 117 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 NDUFAF8A1L188 74 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 TSC22D2O75157 780 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 AKAIN1P0CW23 69 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 S100A10P60903 97 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 LSM3P62310 102 aaKnown RBP2.24□□□□□ -2.05
C2CD3-214ENST00000540057 RANP62826 216 aaKnown RBP2.24□□□□□ -2.05
C2CD3-214ENST00000540057 SPCS2Q15005 226 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 GCSAMLQ5JQS6 135 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 FAM74A4Q5TZK3 123 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 CFAP161Q6P656 301 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 MIR17HGQ75NE6 70 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 PHF5AQ7RTV0 110 aaKnown RBP2.24□□□□□ -2.05
C2CD3-214ENST00000540057 KRTAP11-1Q8IUC1 163 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 CLVS1Q8IUQ0 354 aaPredicted RBP2.24□□□□□ -2.05
C2CD3-214ENST00000540057 OR10G8Q8NGN5 311 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 DYNC2LI1Q8TCX1 351 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 CNBD2Q96M20 576 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 SCGB3A2Q96PL1 93 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 BCL7BQ9BQE9 202 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 SLIRPQ9GZT3 109 aaKnown RBP2.24□□□□□ -2.05
C2CD3-214ENST00000540057 RPP21Q9H633 154 aaKnown RBP2.24□□□□□ -2.05
C2CD3-214ENST00000540057 RABL2AQ9UBK7 228 aaPredicted RBP2.24□□□□□ -2.05
C2CD3-214ENST00000540057 EXTL2Q9UBQ6 330 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 WDR83OSQ9Y284 106 aa2.24□□□□□ -2.05
C2CD3-214ENST00000540057 CARHSP1Q9Y2V2 147 aaKnown RBP2.24□□□□□ -2.05
C2CD3-214ENST00000540057 IGLV4-60A0A075B6I1 120 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 GVQW2A0A096LPI5 108 aaPredicted RBP2.23□□□□□ -2.05
C2CD3-214ENST00000540057 SFT2D2O95562 160 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 TAS2R30P59541 319 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 RAB2AP61019 212 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 SSBP1Q04837 148 aaKnown RBP2.23□□□□□ -2.05
C2CD3-214ENST00000540057 TMEM128Q5BJH2 165 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 C9orf116Q5BN46 136 aaPredicted RBP2.23□□□□□ -2.05
C2CD3-214ENST00000540057 GOLT1AQ6ZVE7 132 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 MITD1Q8WV92 249 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 HYLS1Q96M11 299 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 MIXL1Q9H2W2 232 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 SCP2D1Q9UJQ7 156 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 PKIGQ9Y2B9 76 aa2.23□□□□□ -2.05
C2CD3-214ENST00000540057 TRBV25-1A0A075B6N4 114 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 TRAV6A0A075B6T7 132 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 ANKRD20A5PA0PJZ0 165 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 C7orf66A4D0T2 115 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 H7C423 109 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 EIF3GO75821 320 aaKnown RBP eCLIP2.22□□□□□ -2.05
C2CD3-214ENST00000540057 GCGP01275 180 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 S100A4P26447 101 aaKnown RBP2.22□□□□□ -2.05
C2CD3-214ENST00000540057 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 EIF5AP63241 154 aaKnown RBP2.22□□□□□ -2.05
C2CD3-214ENST00000540057 BAXQ07812 192 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 GAGE2BQ13066 116 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 PPP1R1AQ13522 171 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 NEDD8Q15843 81 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 IQCJQ1A5X6 159 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 KIAA1644Q3SXP7 199 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 TMEM97Q5BJF2 176 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 ADAMTSL4-AS1Q5T5F5 129 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 LINC00173Q6ZV60 143 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 C15orf40Q8WUR7 153 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 SMIM4Q8WVI0 70 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 LINC00526Q96FQ7 95 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 SFRP2Q96HF1 295 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 SGK494Q96LW2 274 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 CARD19Q96LW7 228 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 NMES1Q9C002 83 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 PPDPFQ9H3Y8 114 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 RPS10P5Q9NQ39 176 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 UQCC1Q9NVA1 299 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 IL36BQ9NZH7 164 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 OR5AC2Q9NZP5 309 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 PHLDA3Q9Y5J5 127 aa2.22□□□□□ -2.05
C2CD3-214ENST00000540057 A0A087WZ39 114 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 IGHV1-24A0A0C4DH33 117 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 TRBV6-1A0A0K0K1D8 114 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 UBE2L5PA0A1B0GUS4 154 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 H3BVH4 76 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 OR7C2O60412 319 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 CST7O76096 145 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 ARMS2P0C7Q2 107 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 FGF7P21781 194 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 SULT1A2P50226 295 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 NCS1P62166 190 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 GNG5P63218 68 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 MRPS10P82664 201 aaKnown RBP2.21□□□□□ -2.06
C2CD3-214ENST00000540057 ZNF674Q2M3X9 581 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 SPANXN2Q5MJ10 180 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.21□□□□□ -2.06
C2CD3-214ENST00000540057 TYMSOSQ8TAI1 123 aa2.21□□□□□ -2.06
C2CD3-214ENST00000540057 CMTM2Q8TAZ6 248 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms