RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PIK3CD-AS1Q5SR53 167 aa16.22■□□□□ 0.19
HOMER3-204ENST00000539827 UFSP1Q6NVU6 142 aa16.22■□□□□ 0.19
HOMER3-204ENST00000539827 CSNK1G2-AS1Q8NCQ2 148 aa16.22■□□□□ 0.19
HOMER3-204ENST00000539827 TRBV6-5A0A0K0K1A5 114 aa16.21■□□□□ 0.19
HOMER3-204ENST00000539827 RPL32P62910 135 aaKnown RBP16.21■□□□□ 0.19
HOMER3-204ENST00000539827 IL17DQ8TAD2 202 aa16.21■□□□□ 0.19
HOMER3-204ENST00000539827 hDV102S1A0JD36 115 aa16.2■□□□□ 0.18
HOMER3-204ENST00000539827 HSBP1L1C9JCN9 74 aa16.2■□□□□ 0.18
HOMER3-204ENST00000539827 VCYO14598 125 aa16.2■□□□□ 0.18
HOMER3-204ENST00000539827 TMEM263Q8WUH6 116 aaKnown RBP16.2■□□□□ 0.18
HOMER3-204ENST00000539827 ATRQ13535 2644 aa16.2■□□□□ 0.18
HOMER3-204ENST00000539827 NACAE9PAV3 2078 aa16.19■□□□□ 0.18
HOMER3-204ENST00000539827 TRGV1A0A0A0MS02 117 aa16.19■□□□□ 0.18
HOMER3-204ENST00000539827 RS1O15537 224 aa16.19■□□□□ 0.18
HOMER3-204ENST00000539827 P0DMU3 169 aa16.19■□□□□ 0.18
HOMER3-204ENST00000539827 FAM231AP0DMU4 169 aa16.19■□□□□ 0.18
HOMER3-204ENST00000539827 FAM231CP0DMU5 169 aa16.19■□□□□ 0.18
HOMER3-204ENST00000539827 LGALS9BQ3B8N2 356 aa16.19■□□□□ 0.18
HOMER3-204ENST00000539827 LGALS9CQ6DKI2 356 aa16.19■□□□□ 0.18
HOMER3-204ENST00000539827 Q6ZSN1 163 aa16.19■□□□□ 0.18
HOMER3-204ENST00000539827 K7EMI3 77 aa16.18■□□□□ 0.18
HOMER3-204ENST00000539827 WFDC9Q8NEX5 89 aa16.18■□□□□ 0.18
HOMER3-204ENST00000539827 MRPS16Q9Y3D3 137 aaKnown RBP16.18■□□□□ 0.18
HOMER3-204ENST00000539827 PRSS1P07477 247 aa16.18■□□□□ 0.18
HOMER3-204ENST00000539827 ATP5LO75964 103 aa16.17■□□□□ 0.18
HOMER3-204ENST00000539827 TOMM6Q96B49 74 aa16.17■□□□□ 0.18
HOMER3-204ENST00000539827 NOTCH3Q9UM47 2321 aa16.16■□□□□ 0.18
HOMER3-204ENST00000539827 H7C1H1 209 aa16.16■□□□□ 0.18
HOMER3-204ENST00000539827 C2orf66Q6UXQ4 117 aa16.16■□□□□ 0.18
HOMER3-204ENST00000539827 Q6ZTI0 123 aa16.16■□□□□ 0.18
HOMER3-204ENST00000539827 KIR2DL4Q99706 377 aa16.16■□□□□ 0.18
HOMER3-204ENST00000539827 NOP10Q9NPE3 64 aaKnown RBP16.16■□□□□ 0.18
HOMER3-204ENST00000539827 DKK2Q9UBU2 259 aa16.16■□□□□ 0.18
HOMER3-204ENST00000539827 TRBV27A0A0K0K1C4 114 aa16.15■□□□□ 0.18
HOMER3-204ENST00000539827 COL5A1-AS1Q5SY13 56 aa16.15■□□□□ 0.18
HOMER3-204ENST00000539827 ZFP2Q6ZN57 461 aa16.15■□□□□ 0.18
HOMER3-204ENST00000539827 VWFP04275 2813 aa16.15■□□□□ 0.18
HOMER3-204ENST00000539827 RHODO00212 210 aa16.15■□□□□ 0.18
HOMER3-204ENST00000539827 RRN3P1Q2M238 152 aa16.15■□□□□ 0.18
HOMER3-204ENST00000539827 C16orf74Q96GX8 76 aa16.15■□□□□ 0.18
HOMER3-204ENST00000539827 SCGB3A1Q96QR1 104 aa16.15■□□□□ 0.18
HOMER3-204ENST00000539827 EDA2RQ9HAV5 297 aa16.15■□□□□ 0.18
HOMER3-204ENST00000539827 PLAC8L1A1L4L8 177 aa16.14■□□□□ 0.17
HOMER3-204ENST00000539827 PRIMA1Q86XR5 153 aa16.14■□□□□ 0.17
HOMER3-204ENST00000539827 Q9UF83 564 aa16.14■□□□□ 0.17
HOMER3-204ENST00000539827 OR4C5Q8NGB2 326 aa16.13■□□□□ 0.17
HOMER3-204ENST00000539827 BATFQ16520 125 aa16.13■□□□□ 0.17
HOMER3-204ENST00000539827 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.12■□□□□ 0.17
HOMER3-204ENST00000539827 ODF1Q14990 250 aa16.12■□□□□ 0.17
HOMER3-204ENST00000539827 IGHV3-53P01767 116 aa16.11■□□□□ 0.17
HOMER3-204ENST00000539827 C3orf56Q8N813 242 aa16.11■□□□□ 0.17
HOMER3-204ENST00000539827 DAZ2Q13117 558 aaKnown RBP16.11■□□□□ 0.17
HOMER3-204ENST00000539827 ZNF479Q96JC4 524 aa16.11■□□□□ 0.17
HOMER3-204ENST00000539827 TP53TG1Q9Y2A0 90 aa16.11■□□□□ 0.17
HOMER3-204ENST00000539827 TNFRSF18Q9Y5U5 241 aa16.11■□□□□ 0.17
HOMER3-204ENST00000539827 I3L3M4 83 aa16.1■□□□□ 0.17
HOMER3-204ENST00000539827 TSHBP01222 138 aa16.1■□□□□ 0.17
HOMER3-204ENST00000539827 CYSLTR1Q9Y271 337 aa16.1■□□□□ 0.17
HOMER3-204ENST00000539827 RPL39P62891 51 aaKnown RBP16.09■□□□□ 0.17
HOMER3-204ENST00000539827 NEXN-AS1Q8NBZ9 246 aa16.09■□□□□ 0.17
HOMER3-204ENST00000539827 GAGE12BA1L429 117 aa16.08■□□□□ 0.16
HOMER3-204ENST00000539827 GAGE7O76087 117 aa16.08■□□□□ 0.16
HOMER3-204ENST00000539827 GAGE12FP0CL80 117 aa16.08■□□□□ 0.16
HOMER3-204ENST00000539827 GAGE12GP0CL81 117 aa16.08■□□□□ 0.16
HOMER3-204ENST00000539827 GAGE12IP0CL82 117 aa16.08■□□□□ 0.16
HOMER3-204ENST00000539827 RIPPLY3P57055 190 aa16.08■□□□□ 0.16
HOMER3-204ENST00000539827 SLC25A34Q6PIV7 304 aa16.08■□□□□ 0.16
HOMER3-204ENST00000539827 TRAV4A0A0B4J268 109 aa16.07■□□□□ 0.16
HOMER3-204ENST00000539827 G0S2P27469 103 aa16.07■□□□□ 0.16
HOMER3-204ENST00000539827 EMP1P54849 157 aa16.07■□□□□ 0.16
HOMER3-204ENST00000539827 ERASQ7Z444 233 aa16.07■□□□□ 0.16
HOMER3-204ENST00000539827 STPG4Q8N801 248 aa16.07■□□□□ 0.16
HOMER3-204ENST00000539827 OVOL2Q9BRP0 275 aa16.07■□□□□ 0.16
HOMER3-204ENST00000539827 WIPF1O43516 503 aa16.06■□□□□ 0.16
HOMER3-204ENST00000539827 TCTAP57738 103 aa16.06■□□□□ 0.16
HOMER3-204ENST00000539827 RHOHQ15669 191 aa16.06■□□□□ 0.16
HOMER3-204ENST00000539827 ANKRD39Q53RE8 183 aa16.06■□□□□ 0.16
HOMER3-204ENST00000539827 C12orf54Q6X4T0 127 aa16.06■□□□□ 0.16
HOMER3-204ENST00000539827 A0A087WX48 190 aa16.06■□□□□ 0.16
HOMER3-204ENST00000539827 BAALCQ8WXS3 180 aa16.06■□□□□ 0.16
HOMER3-204ENST00000539827 ZMAT4Q9H898 229 aa16.06■□□□□ 0.16
HOMER3-204ENST00000539827 MRPL35Q9NZE8 188 aaKnown RBP16.06■□□□□ 0.16
HOMER3-204ENST00000539827 TP73-AS1Q9UF72 201 aa16.06■□□□□ 0.16
HOMER3-204ENST00000539827 SHISA2Q6UWI4 295 aa16.04■□□□□ 0.16
HOMER3-204ENST00000539827 TRGV2A0A075B6R0 118 aa16.04■□□□□ 0.16
HOMER3-204ENST00000539827 IGKCP01834 107 aa16.04■□□□□ 0.16
HOMER3-204ENST00000539827 OXLD1Q5BKU9 147 aa16.04■□□□□ 0.16
HOMER3-204ENST00000539827 DNAJC30Q96LL9 226 aa16.04■□□□□ 0.16
HOMER3-204ENST00000539827 X6R8D5 127 aa16.04■□□□□ 0.16
HOMER3-204ENST00000539827 IGIPA6NJ69 53 aa16.03■□□□□ 0.16
HOMER3-204ENST00000539827 DPM2O94777 84 aa16.03■□□□□ 0.16
HOMER3-204ENST00000539827 PHLDA1Q8WV24 401 aaPredicted RBP16.03■□□□□ 0.16
HOMER3-204ENST00000539827 TRAV12-1A0A0B4J245 112 aa16.02■□□□□ 0.16
HOMER3-204ENST00000539827 IGHV3-38A0A0C4DH36 116 aa16.02■□□□□ 0.16
HOMER3-204ENST00000539827 ZNF25P17030 456 aaPredicted RBP16.02■□□□□ 0.15
HOMER3-204ENST00000539827 GAGE1Q13065 139 aa16.02■□□□□ 0.15
HOMER3-204ENST00000539827 CHTOPQ9Y3Y2 248 aaKnown RBP16.02■□□□□ 0.15
HOMER3-204ENST00000539827 TRRAPQ9Y4A5 3859 aa16.01■□□□□ 0.15
HOMER3-204ENST00000539827 LINC01549A6NIU2 74 aa16.01■□□□□ 0.15
HOMER3-204ENST00000539827 APOC4P55056 127 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms