RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MDFICQ9P1T7 246 aa13.14□□□□□ -0.31
RAB40C-205ENST00000539661 MOB4Q9Y3A3 225 aa13.14□□□□□ -0.31
RAB40C-205ENST00000539661 IGSF10Q6WRI0 2623 aa13.14□□□□□ -0.31
RAB40C-205ENST00000539661 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
RAB40C-205ENST00000539661 TRBV30A0A0K0K1B3 111 aa13.14□□□□□ -0.31
RAB40C-205ENST00000539661 M0R2P5 195 aa13.14□□□□□ -0.31
RAB40C-205ENST00000539661 NTN5Q8WTR8 489 aaPredicted RBP13.14□□□□□ -0.31
RAB40C-205ENST00000539661 JPT2Q9H910 190 aa13.13□□□□□ -0.31
RAB40C-205ENST00000539661 TRBV10-2A0A0K0K1G8 114 aa13.13□□□□□ -0.31
RAB40C-205ENST00000539661 NPFFO15130 113 aa13.13□□□□□ -0.31
RAB40C-205ENST00000539661 BRI3O95415 125 aa13.13□□□□□ -0.31
RAB40C-205ENST00000539661 SS18L2Q9UHA2 77 aa13.13□□□□□ -0.31
RAB40C-205ENST00000539661 A0A087WWL8 130 aa13.12□□□□□ -0.31
RAB40C-205ENST00000539661 ZNF22P17026 224 aaPredicted RBP13.12□□□□□ -0.31
RAB40C-205ENST00000539661 SPANXA1Q9NS26 97 aa13.12□□□□□ -0.31
RAB40C-205ENST00000539661 RPL11P62913 178 aaKnown RBP13.12□□□□□ -0.31
RAB40C-205ENST00000539661 Q1RN00 199 aa13.11□□□□□ -0.31
RAB40C-205ENST00000539661 USMG5Q96IX5 58 aa13.11□□□□□ -0.31
RAB40C-205ENST00000539661 MYO18BQ8IUG5 2567 aa13.11□□□□□ -0.31
RAB40C-205ENST00000539661 TRAV8-4A0A0B4J246 113 aa13.11□□□□□ -0.31
RAB40C-205ENST00000539661 TRAV4A0A0B4J268 109 aa13.11□□□□□ -0.31
RAB40C-205ENST00000539661 TRBV12-3P01733 135 aa13.11□□□□□ -0.31
RAB40C-205ENST00000539661 IFITM1P13164 125 aa13.11□□□□□ -0.31
RAB40C-205ENST00000539661 TTC32Q5I0X7 151 aa13.11□□□□□ -0.31
RAB40C-205ENST00000539661 USP9XQ93008 2570 aaPredicted RBP13.1□□□□□ -0.31
RAB40C-205ENST00000539661 B5MCH6 92 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 H3BUA1 57 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 UCNP55089 124 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 GAGE12JA6NER3 117 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 H7C2G1 150 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 GAGE7O76087 117 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 GAGE12FP0CL80 117 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 GAGE12GP0CL81 117 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 GAGE12IP0CL82 117 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 GAGE4Q13068 117 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 C9orf85Q96MD7 179 aa13.1□□□□□ -0.31
RAB40C-205ENST00000539661 ZNF256Q9Y2P7 627 aaPredicted RBP13.1□□□□□ -0.31
RAB40C-205ENST00000539661 M0QY20 66 aa13.09□□□□□ -0.31
RAB40C-205ENST00000539661 ADORA2A-AS1P86434 159 aa13.09□□□□□ -0.31
RAB40C-205ENST00000539661 MRPL23Q16540 153 aaKnown RBP13.09□□□□□ -0.31
RAB40C-205ENST00000539661 A0A0J9YXY3 114 aa13.09□□□□□ -0.31
RAB40C-205ENST00000539661 C20orf203Q8NBC4 194 aa13.09□□□□□ -0.31
RAB40C-205ENST00000539661 DEFB104AQ8WTQ1 72 aa13.09□□□□□ -0.31
RAB40C-205ENST00000539661 POLQO75417 2590 aa13.09□□□□□ -0.31
RAB40C-205ENST00000539661 H3BMM0 161 aa13.09□□□□□ -0.31
RAB40C-205ENST00000539661 UBE2WQ96B02 151 aa13.09□□□□□ -0.31
RAB40C-205ENST00000539661 ODF3Q96PU9 254 aa13.09□□□□□ -0.31
RAB40C-205ENST00000539661 RHPN1-AS1Q9BWJ2 59 aa13.09□□□□□ -0.31
RAB40C-205ENST00000539661 CRLF1O75462 422 aa13.08□□□□□ -0.32
RAB40C-205ENST00000539661 ELANEP08246 267 aa13.08□□□□□ -0.32
RAB40C-205ENST00000539661 ID1P41134 155 aa13.08□□□□□ -0.32
RAB40C-205ENST00000539661 TMEM219Q86XT9 240 aa13.08□□□□□ -0.32
RAB40C-205ENST00000539661 LINC00527Q9UJ94 153 aa13.08□□□□□ -0.32
RAB40C-205ENST00000539661 A0A1W2PPR1 153 aa13.07□□□□□ -0.32
RAB40C-205ENST00000539661 IGHV4-39P01824 125 aa13.07□□□□□ -0.32
RAB40C-205ENST00000539661 OPRPNQ99935 248 aaPredicted RBP13.07□□□□□ -0.32
RAB40C-205ENST00000539661 TEX49A0A1B0GTD5 131 aa13.07□□□□□ -0.32
RAB40C-205ENST00000539661 H3BT86 120 aa13.07□□□□□ -0.32
RAB40C-205ENST00000539661 TRIAP1O43715 76 aa13.07□□□□□ -0.32
RAB40C-205ENST00000539661 ZNF56Q15929 161 aa13.07□□□□□ -0.32
RAB40C-205ENST00000539661 IGHV3-16A0A0C4DH30 117 aa13.06□□□□□ -0.32
RAB40C-205ENST00000539661 I3L3M4 83 aa13.06□□□□□ -0.32
RAB40C-205ENST00000539661 FAM74A4Q5TZK3 123 aa13.06□□□□□ -0.32
RAB40C-205ENST00000539661 IGLV4-3A0A075B6K6 122 aa13.06□□□□□ -0.32
RAB40C-205ENST00000539661 ZANQ9Y493 2812 aa13.05□□□□□ -0.32
RAB40C-205ENST00000539661 A0A0J9YXV3 536 aa13.05□□□□□ -0.32
RAB40C-205ENST00000539661 C15orf53Q8NAA6 179 aa13.05□□□□□ -0.32
RAB40C-205ENST00000539661 SPANXDQ9BXN6 97 aa13.05□□□□□ -0.32
RAB40C-205ENST00000539661 DAZ1Q9NQZ3 744 aaKnown RBP13.05□□□□□ -0.32
RAB40C-205ENST00000539661 SPANXCQ9NY87 97 aa13.05□□□□□ -0.32
RAB40C-205ENST00000539661 TRAV12-3A0A0B4J271 114 aa13.05□□□□□ -0.32
RAB40C-205ENST00000539661 LITAFQ99732 161 aa13.05□□□□□ -0.32
RAB40C-205ENST00000539661 IGKV3-7A0A075B6H7 116 aa13.04□□□□□ -0.32
RAB40C-205ENST00000539661 COX6CP09669 75 aa13.04□□□□□ -0.32
RAB40C-205ENST00000539661 IGHV3-30-3P0DP02 117 aa13.04□□□□□ -0.32
RAB40C-205ENST00000539661 C2orf82Q6UX34 121 aa13.04□□□□□ -0.32
RAB40C-205ENST00000539661 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
RAB40C-205ENST00000539661 IGHV3-64A0A075B6Q5 118 aa13.04□□□□□ -0.32
RAB40C-205ENST00000539661 FAM240AA0A1B0GVK7 77 aa13.04□□□□□ -0.32
RAB40C-205ENST00000539661 LMO4P61968 165 aa13.04□□□□□ -0.32
RAB40C-205ENST00000539661 TIMM21Q9BVV7 248 aa13.04□□□□□ -0.32
RAB40C-205ENST00000539661 ICOSQ9Y6W8 199 aa13.04□□□□□ -0.32
RAB40C-205ENST00000539661 K7EMT4 169 aa13.03□□□□□ -0.32
RAB40C-205ENST00000539661 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.32
RAB40C-205ENST00000539661 CCDC179H3BU77 68 aa13.02□□□□□ -0.33
RAB40C-205ENST00000539661 H7C423 109 aa13.02□□□□□ -0.33
RAB40C-205ENST00000539661 MRPS36P82909 103 aaKnown RBP13.02□□□□□ -0.33
RAB40C-205ENST00000539661 DEFB121Q5J5C9 76 aa13.02□□□□□ -0.33
RAB40C-205ENST00000539661 DCANP1Q8TF63 244 aa13.02□□□□□ -0.33
RAB40C-205ENST00000539661 IGHV3-11P01762 117 aa13.01□□□□□ -0.33
RAB40C-205ENST00000539661 IGHG2P01859 326 aa13.01□□□□□ -0.33
RAB40C-205ENST00000539661 FAM208BQ5VWN6 2430 aa13.01□□□□□ -0.33
RAB40C-205ENST00000539661 IGHV1-58A0A0C4DH39 117 aa13□□□□□ -0.33
RAB40C-205ENST00000539661 MIAQ16674 131 aa13□□□□□ -0.33
RAB40C-205ENST00000539661 EDA2RQ9HAV5 297 aa13□□□□□ -0.33
RAB40C-205ENST00000539661 SPXQ9BT56 116 aa12.99□□□□□ -0.33
RAB40C-205ENST00000539661 ZNF580Q9UK33 172 aa12.99□□□□□ -0.33
RAB40C-205ENST00000539661 KLRB1Q12918 225 aa12.99□□□□□ -0.33
RAB40C-205ENST00000539661 CFAP161Q6P656 301 aa12.99□□□□□ -0.33
RAB40C-205ENST00000539661 IGHV1OR15-1A0A075B7D0 117 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms