RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 FAM231CP0DMU5 169 aa7.17□□□□□ -1.26
CDH13-204ENST00000539548 FAM74A4Q5TZK3 123 aa7.17□□□□□ -1.26
CDH13-204ENST00000539548 COL6A6A6NMZ7 2263 aa7.17□□□□□ -1.26
CDH13-204ENST00000539548 RELNP78509 3460 aa7.16□□□□□ -1.26
CDH13-204ENST00000539548 ZNF56Q15929 161 aa7.16□□□□□ -1.26
CDH13-204ENST00000539548 C20orf203Q8NBC4 194 aa7.16□□□□□ -1.26
CDH13-204ENST00000539548 PTH2Q96A98 100 aa7.16□□□□□ -1.26
CDH13-204ENST00000539548 IGHV1OR15-1A0A075B7D0 117 aa7.16□□□□□ -1.26
CDH13-204ENST00000539548 A8MWV9 139 aa7.16□□□□□ -1.26
CDH13-204ENST00000539548 CRYBA4P53673 196 aa7.16□□□□□ -1.26
CDH13-204ENST00000539548 Q8N1Y9 231 aa7.16□□□□□ -1.26
CDH13-204ENST00000539548 OPRPNQ99935 248 aaPredicted RBP7.16□□□□□ -1.26
CDH13-204ENST00000539548 PRORYQ9H606 182 aa7.16□□□□□ -1.26
CDH13-204ENST00000539548 I3L3M4 83 aa7.15□□□□□ -1.26
CDH13-204ENST00000539548 K7EQG2 157 aa7.15□□□□□ -1.26
CDH13-204ENST00000539548 M0QXV9 152 aa7.15□□□□□ -1.26
CDH13-204ENST00000539548 ZNF688P0C7X2 276 aa7.15□□□□□ -1.26
CDH13-204ENST00000539548 SCGB1C2P0DMR2 95 aa7.15□□□□□ -1.26
CDH13-204ENST00000539548 PLA2G2AP14555 144 aa7.15□□□□□ -1.26
CDH13-204ENST00000539548 PSMB8P28062 276 aa7.15□□□□□ -1.26
CDH13-204ENST00000539548 CKS1BP61024 79 aa7.15□□□□□ -1.26
CDH13-204ENST00000539548 SNRPD3P62318 126 aaKnown RBP7.15□□□□□ -1.26
CDH13-204ENST00000539548 A4D1N5 150 aa7.15□□□□□ -1.27
CDH13-204ENST00000539548 RHODO00212 210 aa7.15□□□□□ -1.27
CDH13-204ENST00000539548 IGHV3-33P01772 117 aa7.15□□□□□ -1.27
CDH13-204ENST00000539548 ZNF22P17026 224 aaPredicted RBP7.15□□□□□ -1.27
CDH13-204ENST00000539548 RNF152Q8N8N0 203 aa7.15□□□□□ -1.27
CDH13-204ENST00000539548 TMEM263Q8WUH6 116 aaKnown RBP7.15□□□□□ -1.27
CDH13-204ENST00000539548 TRAV12-2A0A075B6T6 113 aa7.14□□□□□ -1.27
CDH13-204ENST00000539548 A0A0B4J2C4 111 aa7.14□□□□□ -1.27
CDH13-204ENST00000539548 TMEM89A2RUT3 159 aa7.14□□□□□ -1.27
CDH13-204ENST00000539548 SPINK8P0C7L1 97 aa7.14□□□□□ -1.27
CDH13-204ENST00000539548 FHL3Q13643 280 aa7.14□□□□□ -1.27
CDH13-204ENST00000539548 LY6DQ14210 128 aa7.14□□□□□ -1.27
CDH13-204ENST00000539548 ZNF843Q8N446 348 aa7.14□□□□□ -1.27
CDH13-204ENST00000539548 HECTD1Q9ULT8 2610 aa7.14□□□□□ -1.27
CDH13-204ENST00000539548 IGLV4-3A0A075B6K6 122 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 EIF4EBP3O60516 100 aaPredicted RBP7.13□□□□□ -1.27
CDH13-204ENST00000539548 IGKV3-20P01619 116 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 MSMBP08118 114 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 Q6ZUT4 128 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 ERG28Q9UKR5 140 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 AKAP6Q13023 2319 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 A0A0J9YXV3 536 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 M0R2P5 195 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 MUSTN1Q8IVN3 82 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 EDA2RQ9HAV5 297 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
CDH13-204ENST00000539548 TRGV11A0A075B6L2 103 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.12□□□□□ -1.27
CDH13-204ENST00000539548 MT-ATP8P03928 68 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 SPINK13Q1W4C9 94 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 ANKRD29Q8N6D5 301 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 RAX2Q96IS3 184 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 CCL19Q99731 98 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 SPTAN1Q13813 2472 aaKnown RBP7.12□□□□□ -1.27
CDH13-204ENST00000539548 IGHV4-30-2A0A087WSY4 118 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 TRAV2A0A0B4J234 112 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 TMEM262E9PQX1 116 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 AVPP01185 164 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 XGP55808 180 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 TMEM95Q3KNT9 176 aa7.12□□□□□ -1.27
CDH13-204ENST00000539548 SVEP1Q4LDE5 3571 aa7.11□□□□□ -1.27
CDH13-204ENST00000539548 A0A0J9YXY3 114 aa7.11□□□□□ -1.27
CDH13-204ENST00000539548 CYSRT1A8MQ03 144 aa7.11□□□□□ -1.27
CDH13-204ENST00000539548 SLC25A20O43772 301 aa7.11□□□□□ -1.27
CDH13-204ENST00000539548 GNLYP22749 145 aa7.11□□□□□ -1.27
CDH13-204ENST00000539548 LINC01600Q96MT4 127 aa7.11□□□□□ -1.27
CDH13-204ENST00000539548 J3QKU1 62 aa7.1□□□□□ -1.27
CDH13-204ENST00000539548 TGFAP01135 160 aa7.1□□□□□ -1.27
CDH13-204ENST00000539548 ATP5J2P56134 94 aa7.1□□□□□ -1.27
CDH13-204ENST00000539548 FAM104AQ969W3 186 aa7.1□□□□□ -1.27
CDH13-204ENST00000539548 IGHV3-64A0A075B6Q5 118 aa7.1□□□□□ -1.27
CDH13-204ENST00000539548 B4DSR2 109 aa7.1□□□□□ -1.27
CDH13-204ENST00000539548 C9JAW5 83 aa7.1□□□□□ -1.27
CDH13-204ENST00000539548 IGHV3-30-3P0DP02 117 aa7.1□□□□□ -1.27
CDH13-204ENST00000539548 MRPS36P82909 103 aaKnown RBP7.1□□□□□ -1.27
CDH13-204ENST00000539548 C10orf99Q6UWK7 81 aa7.1□□□□□ -1.27
CDH13-204ENST00000539548 GEMIN7Q9H840 131 aaKnown RBP7.1□□□□□ -1.27
CDH13-204ENST00000539548 COL12A1Q99715 3063 aa7.09□□□□□ -1.27
CDH13-204ENST00000539548 LITAFQ99732 161 aa7.09□□□□□ -1.27
CDH13-204ENST00000539548 SPXQ9BT56 116 aa7.09□□□□□ -1.27
CDH13-204ENST00000539548 TIMM21Q9BVV7 248 aa7.09□□□□□ -1.27
CDH13-204ENST00000539548 TRBV30A0A0K0K1B3 111 aa7.09□□□□□ -1.27
CDH13-204ENST00000539548 IGHV4-59P01825 116 aa7.09□□□□□ -1.27
CDH13-204ENST00000539548 GATA3P23771 443 aa7.09□□□□□ -1.27
CDH13-204ENST00000539548 SYNJ2BPP57105 145 aa7.09□□□□□ -1.27
CDH13-204ENST00000539548 ATXN8Q156A1 80 aa7.09□□□□□ -1.27
CDH13-204ENST00000539548 H7C2G1 150 aa7.08□□□□□ -1.28
CDH13-204ENST00000539548 CD28P10747 220 aa7.08□□□□□ -1.28
CDH13-204ENST00000539548 IGHV1-58A0A0C4DH39 117 aa7.08□□□□□ -1.28
CDH13-204ENST00000539548 RBMY1A1P0DJD3 496 aaKnown RBP7.08□□□□□ -1.28
CDH13-204ENST00000539548 RBMY1CP0DJD4 496 aa7.08□□□□□ -1.28
CDH13-204ENST00000539548 RBMY1FQ15415 496 aaKnown RBP7.08□□□□□ -1.28
CDH13-204ENST00000539548 DEFB112Q30KQ8 113 aa7.08□□□□□ -1.28
CDH13-204ENST00000539548 LINC01620Q4KN68 170 aa7.08□□□□□ -1.28
CDH13-204ENST00000539548 SPANXDQ9BXN6 97 aa7.08□□□□□ -1.28
CDH13-204ENST00000539548 SPANXCQ9NY87 97 aa7.08□□□□□ -1.28
CDH13-204ENST00000539548 ZFHX3Q15911 3703 aa7.07□□□□□ -1.28
CDH13-204ENST00000539548 PTPN13Q12923 2485 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms