RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 IGLL5B9A064 214 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 K7EQM0 130 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 SMIM13P0DJ93 91 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 CSN1S1P47710 185 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 HBBP68871 147 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 SLAQ13239 276 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 LGALS9BQ3B8N2 356 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 KIAA1644Q3SXP7 199 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 LGALS9CQ6DKI2 356 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 LINC00336Q6ZUF6 198 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 C2orf91Q6ZV80 131 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 EXOC3-AS1Q8N2X6 119 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 ZNF479Q96JC4 524 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 IGF2BP2-AS1Q96M15 143 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 VGLL1Q99990 258 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 GEMIN7Q9H840 131 aaKnown RBP5.14□□□□□ -1.59
LMO3-220ENST00000539232 CYSLTR1Q9Y271 337 aa5.14□□□□□ -1.59
LMO3-220ENST00000539232 TRBV19A0A075B6N1 114 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 IGHV1-24A0A0C4DH33 117 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 A8MWL6 223 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.13□□□□□ -1.59
LMO3-220ENST00000539232 H3BUT2 72 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 J3KRW8 73 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 IGLV2-8P01709 118 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 SMAGPQ0VAQ4 97 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 TAL2Q16559 108 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 PRR9Q5T870 116 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 FAM222AQ5U5X8 452 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 GATD1Q8NB37 220 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 ZNF492Q9P255 531 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 DKK2Q9UBU2 259 aa5.13□□□□□ -1.59
LMO3-220ENST00000539232 IGKV2-40A0A087WW87 121 aaPredicted RBP5.12□□□□□ -1.59
LMO3-220ENST00000539232 hDV102S1A0JD36 115 aa5.12□□□□□ -1.59
LMO3-220ENST00000539232 DUSP14O95147 198 aaKnown RBP5.12□□□□□ -1.59
LMO3-220ENST00000539232 IGKV2D-40P01614 121 aaPredicted RBP5.12□□□□□ -1.59
LMO3-220ENST00000539232 FGF6P10767 208 aa5.12□□□□□ -1.59
LMO3-220ENST00000539232 NUP35Q8NFH5 326 aa5.12□□□□□ -1.59
LMO3-220ENST00000539232 GTSF1Q8WW33 167 aa5.12□□□□□ -1.59
LMO3-220ENST00000539232 FXYD5Q96DB9 178 aa5.12□□□□□ -1.59
LMO3-220ENST00000539232 C1QTNF4Q9BXJ3 329 aa5.12□□□□□ -1.59
LMO3-220ENST00000539232 AGPAT4-IT1Q9H0P7 198 aa5.12□□□□□ -1.59
LMO3-220ENST00000539232 GTSF1LQ9H1H1 148 aa5.12□□□□□ -1.59
LMO3-220ENST00000539232 PGPEP1Q9NXJ5 209 aa5.12□□□□□ -1.59
LMO3-220ENST00000539232 TMEM14CQ9P0S9 112 aa5.12□□□□□ -1.59
LMO3-220ENST00000539232 SRRM2Q9UQ35 2752 aaKnown RBP5.12□□□□□ -1.59
LMO3-220ENST00000539232 IGHV4-4A0A075B6R2 117 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 DEFB131BA0A096LNP1 70 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 TEX48A0A1B0GUV7 120 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 NPIPB6E9PJ23 425 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 HTN1P15515 57 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 HTN3P15516 51 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 TCTAP57738 103 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 GAGE5Q13069 117 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 GAGE6Q13070 117 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 MAPKAPK5-AS1Q8N8E1 139 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 OR1L4Q8NGR5 311 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 LINC01587Q99440 93 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 RNASE7Q9H1E1 156 aaKnown RBP5.11□□□□□ -1.59
LMO3-220ENST00000539232 SPANXB1Q9NS25 103 aaPredicted RBP5.11□□□□□ -1.59
LMO3-220ENST00000539232 ERG28Q9UKR5 140 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 KLK5Q9Y337 293 aaPredicted RBP5.11□□□□□ -1.59
LMO3-220ENST00000539232 HSPG2P98160 4391 aa5.11□□□□□ -1.59
LMO3-220ENST00000539232 TRAV10A0A0B4J240 114 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 TRAV12-3A0A0B4J271 114 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 INSP01308 110 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 SPART-AS1P0CW21 52 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 DYNC1H1Q14204 4646 aaKnown RBP5.1□□□□□ -1.59
LMO3-220ENST00000539232 RRN3P1Q2M238 152 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 Q6AWC8 147 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 Q8TAT8 98 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 URB1-AS1Q96HZ7 61 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 FAM19A4Q96LR4 140 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 SLC50A1Q9BRV3 221 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 SPANXDQ9BXN6 97 aa5.1□□□□□ -1.59
LMO3-220ENST00000539232 DNAH11Q96DT5 4516 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 SMIM9A6NGZ8 99 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 E9PLD3 99 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 TMEM262E9PQX1 116 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 DEFB130BP0DP73 79 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 DEFB130AP0DP74 79 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 MGST1P10620 155 aaKnown RBP5.09□□□□□ -1.59
LMO3-220ENST00000539232 FOXA3P55318 350 aaPredicted RBP5.09□□□□□ -1.59
LMO3-220ENST00000539232 S100A7AQ86SG5 101 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 Q8N1X5 172 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 ZFAND2AQ8N6M9 145 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 OR10J6PQ8NGY7 276 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 PAXXQ9BUH6 204 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 TM2D2Q9BX73 214 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 RPP21Q9H633 154 aaKnown RBP5.09□□□□□ -1.59
LMO3-220ENST00000539232 AP5S1Q9NUS5 200 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 SPANXCQ9NY87 97 aa5.09□□□□□ -1.59
LMO3-220ENST00000539232 TRBV6-1A0A0K0K1D8 114 aa5.08□□□□□ -1.6
LMO3-220ENST00000539232 HIGD1CA8MV81 97 aa5.08□□□□□ -1.6
LMO3-220ENST00000539232 H3BMG7 143 aa5.08□□□□□ -1.6
LMO3-220ENST00000539232 CDK2AP2O75956 126 aa5.08□□□□□ -1.6
LMO3-220ENST00000539232 RNASE4P34096 147 aaKnown RBP5.08□□□□□ -1.6
LMO3-220ENST00000539232 LYRM7Q5U5X0 104 aa5.08□□□□□ -1.6
LMO3-220ENST00000539232 NOP10Q9NPE3 64 aaKnown RBP5.08□□□□□ -1.6
LMO3-220ENST00000539232 KLF12Q9Y4X4 402 aa5.08□□□□□ -1.6
LMO3-220ENST00000539232 FBLL1A6NHQ2 334 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms