RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 GAGE13Q4V321 117 aa7.66□□□□□ -1.18
YBX3-207ENST00000539204 TCEAL7Q9BRU2 100 aa7.66□□□□□ -1.18
YBX3-207ENST00000539204 RBAKDNA6NC62 111 aa7.65□□□□□ -1.18
YBX3-207ENST00000539204 OR7C2O60412 319 aa7.65□□□□□ -1.18
YBX3-207ENST00000539204 MT-ND4LP03901 98 aa7.65□□□□□ -1.18
YBX3-207ENST00000539204 PRSS1P07477 247 aa7.65□□□□□ -1.18
YBX3-207ENST00000539204 NBEAP1P0C6P0 100 aa7.65□□□□□ -1.18
YBX3-207ENST00000539204 UBE2G2P60604 165 aa7.65□□□□□ -1.18
YBX3-207ENST00000539204 KCNIP4Q6PIL6 250 aa7.65□□□□□ -1.18
YBX3-207ENST00000539204 YPEL4Q96NS1 127 aa7.65□□□□□ -1.18
YBX3-207ENST00000539204 C1orf43Q9BWL3 253 aa7.65□□□□□ -1.18
YBX3-207ENST00000539204 LENEPQ9Y5L5 61 aa7.65□□□□□ -1.18
YBX3-207ENST00000539204 A0A087WX48 190 aa7.64□□□□□ -1.19
YBX3-207ENST00000539204 DIRC3C9JPN6 131 aa7.64□□□□□ -1.19
YBX3-207ENST00000539204 USP17L23D6RBM5 183 aa7.64□□□□□ -1.19
YBX3-207ENST00000539204 TYMSP04818 313 aa7.64□□□□□ -1.19
YBX3-207ENST00000539204 RPL23P62829 140 aaKnown RBP7.64□□□□□ -1.19
YBX3-207ENST00000539204 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.64□□□□□ -1.19
YBX3-207ENST00000539204 FXYD5Q96DB9 178 aa7.64□□□□□ -1.19
YBX3-207ENST00000539204 KCNS1Q96KK3 526 aa7.64□□□□□ -1.19
YBX3-207ENST00000539204 PGPA6NDG6 321 aa7.63□□□□□ -1.19
YBX3-207ENST00000539204 UBE2L3P68036 154 aaKnown RBP7.63□□□□□ -1.19
YBX3-207ENST00000539204 RPL19P84098 196 aaKnown RBP7.63□□□□□ -1.19
YBX3-207ENST00000539204 WDR73Q6P4I2 378 aa7.63□□□□□ -1.19
YBX3-207ENST00000539204 HIST1H2BAQ96A08 127 aa7.63□□□□□ -1.19
YBX3-207ENST00000539204 ANAPC16Q96DE5 110 aa7.63□□□□□ -1.19
YBX3-207ENST00000539204 TMA7Q9Y2S6 64 aaKnown RBP7.63□□□□□ -1.19
YBX3-207ENST00000539204 TRAV21A0A0B4J279 112 aa7.62□□□□□ -1.19
YBX3-207ENST00000539204 SCO2A0A1W2PP80 73 aa7.62□□□□□ -1.19
YBX3-207ENST00000539204 AKR1C3P42330 323 aa7.62□□□□□ -1.19
YBX3-207ENST00000539204 SUMO1P63165 101 aaKnown RBP7.62□□□□□ -1.19
YBX3-207ENST00000539204 CIRBPQ14011 172 aaKnown RBP7.62□□□□□ -1.19
YBX3-207ENST00000539204 ZNF674Q2M3X9 581 aa7.62□□□□□ -1.19
YBX3-207ENST00000539204 LINC01551Q86U37 167 aa7.62□□□□□ -1.19
YBX3-207ENST00000539204 C7orf33Q8WU49 177 aa7.62□□□□□ -1.19
YBX3-207ENST00000539204 CHCHD7Q9BUK0 85 aa7.62□□□□□ -1.19
YBX3-207ENST00000539204 A0A087WYN8 130 aa7.61□□□□□ -1.19
YBX3-207ENST00000539204 PHOX2AO14813 284 aa7.61□□□□□ -1.19
YBX3-207ENST00000539204 PPP1R2P9O14990 202 aa7.61□□□□□ -1.19
YBX3-207ENST00000539204 LINC00694P0DN24 101 aa7.61□□□□□ -1.19
YBX3-207ENST00000539204 ADIRFQ15847 76 aa7.61□□□□□ -1.19
YBX3-207ENST00000539204 REG3GQ6UW15 175 aa7.61□□□□□ -1.19
YBX3-207ENST00000539204 ISOC2Q96AB3 205 aa7.61□□□□□ -1.19
YBX3-207ENST00000539204 RNF185Q96GF1 192 aa7.61□□□□□ -1.19
YBX3-207ENST00000539204 TRBV20OR9-2A0A075B6H5 130 aa7.6□□□□□ -1.19
YBX3-207ENST00000539204 S100A9P06702 114 aaKnown RBP7.6□□□□□ -1.19
YBX3-207ENST00000539204 RANP62826 216 aaKnown RBP7.6□□□□□ -1.19
YBX3-207ENST00000539204 DMRTA1Q5VZB9 504 aa7.6□□□□□ -1.19
YBX3-207ENST00000539204 ENHOQ6UWT2 76 aa7.6□□□□□ -1.19
YBX3-207ENST00000539204 ARL6IP6Q8N6S5 226 aa7.6□□□□□ -1.19
YBX3-207ENST00000539204 OCC1Q8TAD7 63 aa7.6□□□□□ -1.19
YBX3-207ENST00000539204 IMMP2LQ96T52 175 aa7.6□□□□□ -1.19
YBX3-207ENST00000539204 DERL1Q9BUN8 251 aa7.6□□□□□ -1.19
YBX3-207ENST00000539204 SAMD10Q9BYL1 202 aa7.6□□□□□ -1.19
YBX3-207ENST00000539204 KIF25-AS1Q9Y6Z4 181 aa7.6□□□□□ -1.19
YBX3-207ENST00000539204 TRBV24-1A0A075B6N3 115 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 PGPEP1LA6NFU8 196 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 TMEM262E9PQX1 116 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 HLA-DQA1P01909 254 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 CRPP02741 224 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 RAB5AP20339 215 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 RPL35P42766 123 aaKnown RBP7.59□□□□□ -1.19
YBX3-207ENST00000539204 ZFP2Q6ZN57 461 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 PTH2Q96A98 100 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 SMIM12Q96EX1 92 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 OTORQ9NRC9 128 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 Q9UF83 564 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 EPDR1Q9UM22 224 aa7.59□□□□□ -1.19
YBX3-207ENST00000539204 LOC105371267A0A1B0GV96 52 aa7.58□□□□□ -1.2
YBX3-207ENST00000539204 FLI1Q01543 452 aaPredicted RBP7.58□□□□□ -1.2
YBX3-207ENST00000539204 C5orf17Q8NAS9 161 aa7.58□□□□□ -1.2
YBX3-207ENST00000539204 GTSF1Q8WW33 167 aa7.58□□□□□ -1.2
YBX3-207ENST00000539204 BTF3L4Q96K17 158 aa7.58□□□□□ -1.2
YBX3-207ENST00000539204 TRBV6-1A0A0K0K1D8 114 aa7.57□□□□□ -1.2
YBX3-207ENST00000539204 PEX7O00628 323 aa7.57□□□□□ -1.2
YBX3-207ENST00000539204 GCGP01275 180 aa7.57□□□□□ -1.2
YBX3-207ENST00000539204 GNG4P50150 75 aa7.57□□□□□ -1.2
YBX3-207ENST00000539204 SPINK6Q6UWN8 80 aa7.57□□□□□ -1.2
YBX3-207ENST00000539204 SFRP2Q96HF1 295 aa7.57□□□□□ -1.2
YBX3-207ENST00000539204 LINC00479Q96M42 142 aa7.57□□□□□ -1.2
YBX3-207ENST00000539204 OSTCQ9NRP0 149 aa7.57□□□□□ -1.2
YBX3-207ENST00000539204 IGHV3-64A0A075B6Q5 118 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 TRAV9-1A0A075B6T8 112 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 A8MWV9 139 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 C1orf196B1AJZ1 125 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 K7EN84 100 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 CHTF8P0CG12 524 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 S100PP25815 95 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 CENPWQ5EE01 88 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 C14orf178Q8N769 122 aaPredicted RBP7.56□□□□□ -1.2
YBX3-207ENST00000539204 OR10G8Q8NGN5 311 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 C9orf85Q96MD7 179 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 PLAC8Q9NZF1 115 aa7.56□□□□□ -1.2
YBX3-207ENST00000539204 CXCL1P09341 107 aa7.55□□□□□ -1.2
YBX3-207ENST00000539204 RAB5BP61020 215 aa7.55□□□□□ -1.2
YBX3-207ENST00000539204 CNBPP62633 177 aaKnown RBP7.55□□□□□ -1.2
YBX3-207ENST00000539204 PRR3P79522 188 aaKnown RBP7.55□□□□□ -1.2
YBX3-207ENST00000539204 MIAQ16674 131 aa7.55□□□□□ -1.2
YBX3-207ENST00000539204 SPACA4Q8TDM5 124 aa7.55□□□□□ -1.2
YBX3-207ENST00000539204 FMC1Q96HJ9 113 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms