RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 LINC01356Q8N9X3 169 aa8.83□□□□□ -1
CPNE8-203ENST00000538596 APOMO95445 188 aa8.83□□□□□ -1
CPNE8-203ENST00000538596 P0DMU3 169 aa8.83□□□□□ -1
CPNE8-203ENST00000538596 FAM231AP0DMU4 169 aa8.83□□□□□ -1
CPNE8-203ENST00000538596 FAM231CP0DMU5 169 aa8.83□□□□□ -1
CPNE8-203ENST00000538596 SPANXB1Q9NS25 103 aaPredicted RBP8.83□□□□□ -1
CPNE8-203ENST00000538596 BEX4Q9NWD9 120 aaPredicted RBP8.83□□□□□ -1
CPNE8-203ENST00000538596 MRPL16Q9NX20 251 aaKnown RBP8.83□□□□□ -1
CPNE8-203ENST00000538596 KNCNA6PVL3 124 aa8.83□□□□□ -1
CPNE8-203ENST00000538596 IGHV3-64A0A075B6Q5 118 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 A0A096LNT2 108 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 A0A0J9YY99 117 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 PROK1P58294 105 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 TMEM141Q96I45 108 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 TIMM17AQ99595 171 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 NIPBLQ6KC79 2804 aaeCLIP8.82□□□□□ -1
CPNE8-203ENST00000538596 TRBV6-5A0A0K0K1A5 114 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 GATA3P23771 443 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 SAMD13Q5VXD3 122 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 SYT8Q8NBV8 401 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 DUX3Q96PT4 197 aa8.82□□□□□ -1
CPNE8-203ENST00000538596 SONP18583 2426 aaKnown RBP8.82□□□□□ -1
CPNE8-203ENST00000538596 F8W1H4 67 aa8.81□□□□□ -1
CPNE8-203ENST00000538596 SLURP1P55000 103 aa8.81□□□□□ -1
CPNE8-203ENST00000538596 ODF3Q96PU9 254 aa8.81□□□□□ -1
CPNE8-203ENST00000538596 INSL3P51460 131 aa8.81□□□□□ -1
CPNE8-203ENST00000538596 HERVK_113P61574 105 aa8.81□□□□□ -1
CPNE8-203ENST00000538596 GAGE13Q4V321 117 aa8.81□□□□□ -1
CPNE8-203ENST00000538596 TCTEX1D4Q5JR98 221 aa8.81□□□□□ -1
CPNE8-203ENST00000538596 ZNF702PQ9H963 129 aa8.81□□□□□ -1
CPNE8-203ENST00000538596 Q9UF83 564 aa8.81□□□□□ -1
CPNE8-203ENST00000538596 PRO0461Q9UI25 63 aa8.81□□□□□ -1
CPNE8-203ENST00000538596 UBE2D1P51668 147 aa8.8□□□□□ -1
CPNE8-203ENST00000538596 VPREB3Q9UKI3 123 aa8.8□□□□□ -1
CPNE8-203ENST00000538596 SETD2Q9BYW2 2564 aaPredicted RBP8.8□□□□□ -1
CPNE8-203ENST00000538596 TSPAN13O95857 204 aa8.8□□□□□ -1
CPNE8-203ENST00000538596 WNK1Q9H4A3 2382 aa8.79□□□□□ -1
CPNE8-203ENST00000538596 LOC107984156A0A0G2JMH3 177 aa8.79□□□□□ -1
CPNE8-203ENST00000538596 PAPPA-AS1Q5QFB9 102 aa8.79□□□□□ -1
CPNE8-203ENST00000538596 TRPT1Q86TN4 253 aaKnown RBP8.79□□□□□ -1
CPNE8-203ENST00000538596 ARL17AQ8IVW1 177 aa8.79□□□□□ -1
CPNE8-203ENST00000538596 AMELXQ99217 191 aa8.79□□□□□ -1
CPNE8-203ENST00000538596 J3QQQ9 107 aa8.79□□□□□ -1
CPNE8-203ENST00000538596 DSCR9P59020 149 aa8.79□□□□□ -1
CPNE8-203ENST00000538596 DEFB131AP59861 70 aa8.79□□□□□ -1
CPNE8-203ENST00000538596 CEMP1Q6PRD7 247 aaPredicted RBP8.79□□□□□ -1
CPNE8-203ENST00000538596 SPAG8Q99932 426 aaPredicted RBP8.79□□□□□ -1
CPNE8-203ENST00000538596 APCP25054 2843 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 NOTCH3Q9UM47 2321 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 TMEM238LA0A1B0GVL6 79 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 A6NJY4 79 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 IGHV3-30P01768 117 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 IGHV3-30-5P0DP03 117 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 NSUN5P1Q3KNT7 163 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 C20orf203Q8NBC4 194 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 TSSC4Q9Y5U2 329 aaPredicted RBP8.78□□□□□ -1
CPNE8-203ENST00000538596 A0A0J9YXV3 536 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 TMEM89A2RUT3 159 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 PSMB2P49721 201 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 KRTAP10-9P60411 292 aa8.78□□□□□ -1
CPNE8-203ENST00000538596 RNASE13Q5GAN3 156 aaKnown RBP8.78□□□□□ -1
CPNE8-203ENST00000538596 NACAE9PAV3 2078 aa8.77□□□□□ -1
CPNE8-203ENST00000538596 RBMY1BA6NDE4 496 aaKnown RBP8.77□□□□□ -1.01
CPNE8-203ENST00000538596 RBMY1EA6NEQ0 496 aaKnown RBP8.77□□□□□ -1.01
CPNE8-203ENST00000538596 I3L3M4 83 aa8.77□□□□□ -1.01
CPNE8-203ENST00000538596 RBMY1DP0C7P1 496 aaKnown RBP8.77□□□□□ -1.01
CPNE8-203ENST00000538596 Q6YL49 198 aa8.77□□□□□ -1.01
CPNE8-203ENST00000538596 NDUFA11Q86Y39 141 aa8.77□□□□□ -1.01
CPNE8-203ENST00000538596 UBE2E2Q96LR5 201 aa8.77□□□□□ -1.01
CPNE8-203ENST00000538596 GTSF1LQ9H1H1 148 aa8.77□□□□□ -1.01
CPNE8-203ENST00000538596 CR1P17927 2039 aa8.77□□□□□ -1.01
CPNE8-203ENST00000538596 ELANEP08246 267 aa8.77□□□□□ -1.01
CPNE8-203ENST00000538596 CFC1BP0CG36 223 aa8.77□□□□□ -1.01
CPNE8-203ENST00000538596 CFC1P0CG37 223 aa8.77□□□□□ -1.01
CPNE8-203ENST00000538596 SMCPP49901 116 aaPredicted RBP8.77□□□□□ -1.01
CPNE8-203ENST00000538596 SLC25A29Q8N8R3 303 aa8.77□□□□□ -1.01
CPNE8-203ENST00000538596 HELZ2Q9BYK8 2649 aaKnown RBP8.76□□□□□ -1.01
CPNE8-203ENST00000538596 IGLV4-3A0A075B6K6 122 aa8.76□□□□□ -1.01
CPNE8-203ENST00000538596 LGALS3P17931 250 aaKnown RBP8.76□□□□□ -1.01
CPNE8-203ENST00000538596 RHOHQ15669 191 aa8.76□□□□□ -1.01
CPNE8-203ENST00000538596 HIST2H2BCQ6DN03 193 aa8.76□□□□□ -1.01
CPNE8-203ENST00000538596 KMT2BQ9UMN6 2715 aaPredicted RBP8.76□□□□□ -1.01
CPNE8-203ENST00000538596 ZNF22P17026 224 aaPredicted RBP8.76□□□□□ -1.01
CPNE8-203ENST00000538596 Q6ZSN1 163 aa8.76□□□□□ -1.01
CPNE8-203ENST00000538596 ZNF418Q8TF45 676 aaPredicted RBP8.76□□□□□ -1.01
CPNE8-203ENST00000538596 PRRC2AP48634 2157 aaKnown RBP8.76□□□□□ -1.01
CPNE8-203ENST00000538596 TRGV11A0A075B6L2 103 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 TMEM223A0PJW6 202 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 ADARB2-AS1A8MUL3 147 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 NFE4Q86UQ8 179 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 IGHV4-31P0DP07 118 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 KHDC1LQ5JSQ8 128 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 FAM104AQ969W3 186 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 PTH2Q96A98 100 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 VCX2Q9H322 139 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 J3QLI3 93 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 RHODO00212 210 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 TMEM61Q8N0U2 210 aa8.75□□□□□ -1.01
CPNE8-203ENST00000538596 DLX4Q92988 240 aaPredicted RBP8.75□□□□□ -1.01
CPNE8-203ENST00000538596 CCDC168Q8NDH2 2452 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms