RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 NRACQ8N912 160 aa7.98□□□□□ -1.13
CLIP1-210ENST00000538120 DUX3Q96PT4 197 aa7.98□□□□□ -1.13
CLIP1-210ENST00000538120 SIGMAR1Q99720 223 aa7.98□□□□□ -1.13
CLIP1-210ENST00000538120 ITPR2Q14571 2701 aa7.98□□□□□ -1.13
CLIP1-210ENST00000538120 H3BVH4 76 aa7.98□□□□□ -1.13
CLIP1-210ENST00000538120 WFDC2Q14508 124 aa7.98□□□□□ -1.13
CLIP1-210ENST00000538120 C6orf226Q5I0X4 101 aa7.98□□□□□ -1.13
CLIP1-210ENST00000538120 TM2D2Q9BX73 214 aa7.98□□□□□ -1.13
CLIP1-210ENST00000538120 CUBNO60494 3623 aa7.98□□□□□ -1.13
CLIP1-210ENST00000538120 UNC79Q9P2D8 2635 aa7.98□□□□□ -1.13
CLIP1-210ENST00000538120 A0A0J9YX75 114 aa7.97□□□□□ -1.13
CLIP1-210ENST00000538120 GNRH2O43555 120 aa7.97□□□□□ -1.13
CLIP1-210ENST00000538120 AZU1P20160 251 aa7.97□□□□□ -1.13
CLIP1-210ENST00000538120 AMTNQ6UX39 209 aa7.97□□□□□ -1.13
CLIP1-210ENST00000538120 H3BMG7 143 aa7.97□□□□□ -1.13
CLIP1-210ENST00000538120 ATP5LO75964 103 aa7.97□□□□□ -1.13
CLIP1-210ENST00000538120 SONP18583 2426 aaKnown RBP7.97□□□□□ -1.13
CLIP1-210ENST00000538120 IGLL5B9A064 214 aa7.96□□□□□ -1.13
CLIP1-210ENST00000538120 GAGE5Q13069 117 aa7.96□□□□□ -1.13
CLIP1-210ENST00000538120 GAGE6Q13070 117 aa7.96□□□□□ -1.13
CLIP1-210ENST00000538120 LAGE3Q14657 143 aa7.96□□□□□ -1.13
CLIP1-210ENST00000538120 C11orf44Q8N8P7 122 aa7.96□□□□□ -1.13
CLIP1-210ENST00000538120 GTSF1LQ9H1H1 148 aa7.96□□□□□ -1.13
CLIP1-210ENST00000538120 E9PLD3 99 aa7.96□□□□□ -1.14
CLIP1-210ENST00000538120 SNRPD3P62318 126 aaKnown RBP7.96□□□□□ -1.14
CLIP1-210ENST00000538120 SH2D6Q7Z4S9 175 aa7.96□□□□□ -1.14
CLIP1-210ENST00000538120 DLX4Q92988 240 aaPredicted RBP7.96□□□□□ -1.14
CLIP1-210ENST00000538120 AGRNO00468 2067 aa7.96□□□□□ -1.14
CLIP1-210ENST00000538120 RNASE3P12724 160 aaKnown RBP7.95□□□□□ -1.14
CLIP1-210ENST00000538120 ASIPP42127 132 aa7.95□□□□□ -1.14
CLIP1-210ENST00000538120 C12orf74Q32Q52 190 aa7.95□□□□□ -1.14
CLIP1-210ENST00000538120 SPANXN1Q5VSR9 72 aa7.95□□□□□ -1.14
CLIP1-210ENST00000538120 KLHL30-AS1Q8NEE0 82 aa7.95□□□□□ -1.14
CLIP1-210ENST00000538120 ODF3Q96PU9 254 aa7.95□□□□□ -1.14
CLIP1-210ENST00000538120 A0A087WX48 190 aa7.95□□□□□ -1.14
CLIP1-210ENST00000538120 MED14OSP0DP75 135 aa7.95□□□□□ -1.14
CLIP1-210ENST00000538120 FOXI2Q6ZQN5 318 aa7.95□□□□□ -1.14
CLIP1-210ENST00000538120 IGKV3-20P01619 116 aa7.94□□□□□ -1.14
CLIP1-210ENST00000538120 HIST1H4GQ99525 98 aa7.94□□□□□ -1.14
CLIP1-210ENST00000538120 SPANXB1Q9NS25 103 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-210ENST00000538120 RNASE1P07998 156 aaKnown RBP7.94□□□□□ -1.14
CLIP1-210ENST00000538120 CD28P10747 220 aa7.94□□□□□ -1.14
CLIP1-210ENST00000538120 ETDBQ3ZM63 59 aa7.94□□□□□ -1.14
CLIP1-210ENST00000538120 SMR3AQ99954 134 aa7.94□□□□□ -1.14
CLIP1-210ENST00000538120 TRAV12-3A0A0B4J271 114 aa7.93□□□□□ -1.14
CLIP1-210ENST00000538120 SMIM9A6NGZ8 99 aa7.93□□□□□ -1.14
CLIP1-210ENST00000538120 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-210ENST00000538120 M0R381 172 aa7.93□□□□□ -1.14
CLIP1-210ENST00000538120 S100A4P26447 101 aaKnown RBP7.93□□□□□ -1.14
CLIP1-210ENST00000538120 SMAGPQ0VAQ4 97 aa7.93□□□□□ -1.14
CLIP1-210ENST00000538120 GCN1Q92616 2671 aaKnown RBP7.93□□□□□ -1.14
CLIP1-210ENST00000538120 TRAV12-2A0A075B6T6 113 aa7.93□□□□□ -1.14
CLIP1-210ENST00000538120 INSL3P51460 131 aa7.93□□□□□ -1.14
CLIP1-210ENST00000538120 LINC01006Q8NI28 216 aa7.93□□□□□ -1.14
CLIP1-210ENST00000538120 C16orf95Q9H693 158 aa7.93□□□□□ -1.14
CLIP1-210ENST00000538120 ACANP16112 2415 aa7.93□□□□□ -1.14
CLIP1-210ENST00000538120 MYO9AB2RTY4 2548 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 TRBV7-3A0A075B6L6 115 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 TMEM61Q8N0U2 210 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 DEFB104AQ8WTQ1 72 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 RPL39LQ96EH5 51 aaKnown RBP7.92□□□□□ -1.14
CLIP1-210ENST00000538120 CYSLTR1Q9Y271 337 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 PHLDA3Q9Y5J5 127 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 NXPH4O95158 308 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 HLA-DRB4P13762 266 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 DEFB114Q30KQ6 69 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 SPANXA1Q9NS26 97 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 HLA-DRB4X5D2U9 266 aa7.92□□□□□ -1.14
CLIP1-210ENST00000538120 TRAV2A0A0B4J234 112 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 KNCNA6PVL3 124 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 F8VRH5 84 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 F8W1H4 67 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 DUSP14O95147 198 aaKnown RBP7.91□□□□□ -1.14
CLIP1-210ENST00000538120 SPINK13Q1W4C9 94 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 SMIM2Q9BVW6 85 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 GAGE12HA6NDE8 117 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 A8MTW9 85 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 PLNP26678 52 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 DEFB131AP59861 70 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 C14orf178Q8N769 122 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-210ENST00000538120 RASL10AQ92737 203 aa7.91□□□□□ -1.14
CLIP1-210ENST00000538120 NF1P21359 2839 aa7.9□□□□□ -1.14
CLIP1-210ENST00000538120 H7C1H1 209 aa7.9□□□□□ -1.14
CLIP1-210ENST00000538120 RRN3P1Q2M238 152 aa7.9□□□□□ -1.14
CLIP1-210ENST00000538120 SFTA2Q6UW10 78 aa7.9□□□□□ -1.14
CLIP1-210ENST00000538120 SCGB3A1Q96QR1 104 aa7.9□□□□□ -1.14
CLIP1-210ENST00000538120 PRO0461Q9UI25 63 aa7.9□□□□□ -1.14
CLIP1-210ENST00000538120 KIF25-AS1Q9Y6Z4 181 aa7.9□□□□□ -1.14
CLIP1-210ENST00000538120 FASNP49327 2511 aaKnown RBP7.9□□□□□ -1.14
CLIP1-210ENST00000538120 IGHV3-16A0A0C4DH30 117 aa7.9□□□□□ -1.15
CLIP1-210ENST00000538120 MYMXA0A1B0GTQ4 84 aa7.9□□□□□ -1.15
CLIP1-210ENST00000538120 RBMY1BA6NDE4 496 aaKnown RBP7.9□□□□□ -1.15
CLIP1-210ENST00000538120 RBMY1EA6NEQ0 496 aaKnown RBP7.9□□□□□ -1.15
CLIP1-210ENST00000538120 CD7P09564 240 aa7.9□□□□□ -1.15
CLIP1-210ENST00000538120 RBMY1DP0C7P1 496 aaKnown RBP7.9□□□□□ -1.15
CLIP1-210ENST00000538120 LINC00315P59091 139 aa7.9□□□□□ -1.15
CLIP1-210ENST00000538120 HILS1P60008 231 aa7.9□□□□□ -1.15
CLIP1-210ENST00000538120 TAL2Q16559 108 aa7.9□□□□□ -1.15
CLIP1-210ENST00000538120 MORN3Q6PF18 240 aaPredicted RBP7.9□□□□□ -1.15
CLIP1-210ENST00000538120 POM121L12Q8N7R1 296 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms