RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 C18orf65Q6ZTR6 163 aa8.5□□□□□ -1.05
LINC00346-201ENST00000538077 CEP250Q9BV73 2442 aa8.49□□□□□ -1.05
LINC00346-201ENST00000538077 LMO4P61968 165 aa8.49□□□□□ -1.05
LINC00346-201ENST00000538077 PRO0255Q9UI72 69 aa8.49□□□□□ -1.05
LINC00346-201ENST00000538077 NREPQ16612 68 aa8.49□□□□□ -1.05
LINC00346-201ENST00000538077 RBM3P98179 157 aaKnown RBP8.49□□□□□ -1.05
LINC00346-201ENST00000538077 SMR3AQ99954 134 aa8.49□□□□□ -1.05
LINC00346-201ENST00000538077 TRBV6-1A0A0K0K1D8 114 aa8.49□□□□□ -1.05
LINC00346-201ENST00000538077 INSL3P51460 131 aa8.49□□□□□ -1.05
LINC00346-201ENST00000538077 DIRC1Q969H9 104 aa8.49□□□□□ -1.05
LINC00346-201ENST00000538077 TNFRSF13BO14836 293 aaPredicted RBP8.48□□□□□ -1.05
LINC00346-201ENST00000538077 SIVA1O15304 175 aa8.48□□□□□ -1.05
LINC00346-201ENST00000538077 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
LINC00346-201ENST00000538077 LRRC75A-AS1Q8N1F1 130 aa8.48□□□□□ -1.05
LINC00346-201ENST00000538077 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
LINC00346-201ENST00000538077 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
LINC00346-201ENST00000538077 A0A087WZ39 114 aa8.48□□□□□ -1.05
LINC00346-201ENST00000538077 REG3AQ06141 175 aa8.48□□□□□ -1.05
LINC00346-201ENST00000538077 SPTA1P02549 2419 aa8.48□□□□□ -1.05
LINC00346-201ENST00000538077 LY6G6CO95867 125 aa8.47□□□□□ -1.05
LINC00346-201ENST00000538077 IGF1P05019 195 aa8.47□□□□□ -1.05
LINC00346-201ENST00000538077 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
LINC00346-201ENST00000538077 FRMD6-AS1P0C7T7 363 aa8.47□□□□□ -1.05
LINC00346-201ENST00000538077 IL17DQ8TAD2 202 aa8.47□□□□□ -1.05
LINC00346-201ENST00000538077 EP300Q09472 2414 aaPredicted RBP8.47□□□□□ -1.05
LINC00346-201ENST00000538077 ODF3BA8MYP8 253 aa8.47□□□□□ -1.05
LINC00346-201ENST00000538077 IL15RAQ13261 267 aa8.47□□□□□ -1.05
LINC00346-201ENST00000538077 C1orf229Q6ZS94 237 aaPredicted RBP8.47□□□□□ -1.05
LINC00346-201ENST00000538077 AKAP6Q13023 2319 aa8.47□□□□□ -1.05
LINC00346-201ENST00000538077 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.05
LINC00346-201ENST00000538077 CHD3Q12873 2000 aaKnown RBP8.46□□□□□ -1.05
LINC00346-201ENST00000538077 TMEM89A2RUT3 159 aa8.46□□□□□ -1.05
LINC00346-201ENST00000538077 ZNF80P51504 273 aaPredicted RBP8.46□□□□□ -1.06
LINC00346-201ENST00000538077 HRCT1Q6UXD1 115 aa8.46□□□□□ -1.06
LINC00346-201ENST00000538077 WFDC10AQ9H1F0 79 aa8.46□□□□□ -1.06
LINC00346-201ENST00000538077 NDUFC2O95298 119 aa8.46□□□□□ -1.06
LINC00346-201ENST00000538077 CACNA1GO43497 2377 aa8.46□□□□□ -1.06
LINC00346-201ENST00000538077 NUP210LQ5VU65 1888 aa8.46□□□□□ -1.06
LINC00346-201ENST00000538077 DYSFO75923 2080 aa8.45□□□□□ -1.06
LINC00346-201ENST00000538077 Q6ZSV7 163 aa8.45□□□□□ -1.06
LINC00346-201ENST00000538077 C11orf86A6NJI1 115 aa8.45□□□□□ -1.06
LINC00346-201ENST00000538077 GDF5OSQ5U4N7 250 aa8.45□□□□□ -1.06
LINC00346-201ENST00000538077 LGALS9O00182 355 aa8.45□□□□□ -1.06
LINC00346-201ENST00000538077 TDRG1Q3Y452 100 aa8.45□□□□□ -1.06
LINC00346-201ENST00000538077 FBXL19-AS1Q494R0 122 aa8.45□□□□□ -1.06
LINC00346-201ENST00000538077 IGKV2D-26A0A0A0MRZ7 120 aa8.45□□□□□ -1.06
LINC00346-201ENST00000538077 PROK1P58294 105 aa8.45□□□□□ -1.06
LINC00346-201ENST00000538077 DEFB114Q30KQ6 69 aa8.45□□□□□ -1.06
LINC00346-201ENST00000538077 TNRC6AQ8NDV7 1962 aaKnown RBP8.45□□□□□ -1.06
LINC00346-201ENST00000538077 CEP192Q8TEP8 1941 aa8.44□□□□□ -1.06
LINC00346-201ENST00000538077 MUC22E2RYF6 1773 aaPredicted RBP8.44□□□□□ -1.06
LINC00346-201ENST00000538077 ZFAND2AQ8N6M9 145 aa8.44□□□□□ -1.06
LINC00346-201ENST00000538077 CHCHD10Q8WYQ3 142 aaPredicted RBP8.44□□□□□ -1.06
LINC00346-201ENST00000538077 COX7BP24311 80 aa8.44□□□□□ -1.06
LINC00346-201ENST00000538077 LINC00467Q9BRT7 94 aa8.44□□□□□ -1.06
LINC00346-201ENST00000538077 A0A1B0GX51 115 aa8.43□□□□□ -1.06
LINC00346-201ENST00000538077 DCANP1Q8TF63 244 aa8.43□□□□□ -1.06
LINC00346-201ENST00000538077 IGKV1D-37A0A075B6S9 117 aa8.43□□□□□ -1.06
LINC00346-201ENST00000538077 IGKV4-1P06312 121 aa8.43□□□□□ -1.06
LINC00346-201ENST00000538077 SPTBN2O15020 2390 aa8.43□□□□□ -1.06
LINC00346-201ENST00000538077 SPTBN1Q01082 2364 aaKnown RBP8.43□□□□□ -1.06
LINC00346-201ENST00000538077 FXYD2P54710 66 aa8.42□□□□□ -1.06
LINC00346-201ENST00000538077 SHISA2Q6UWI4 295 aa8.42□□□□□ -1.06
LINC00346-201ENST00000538077 PRM2P04554 102 aa8.42□□□□□ -1.06
LINC00346-201ENST00000538077 PLA2G2AP14555 144 aa8.42□□□□□ -1.06
LINC00346-201ENST00000538077 H0YGX0 51 aa8.42□□□□□ -1.06
LINC00346-201ENST00000538077 FOXI1Q12951 378 aa8.42□□□□□ -1.06
LINC00346-201ENST00000538077 SVIPQ8NHG7 77 aa8.42□□□□□ -1.06
LINC00346-201ENST00000538077 CXCL5P42830 114 aa8.42□□□□□ -1.06
LINC00346-201ENST00000538077 Q6ZSR3 168 aa8.42□□□□□ -1.06
LINC00346-201ENST00000538077 PSMB8P28062 276 aa8.41□□□□□ -1.06
LINC00346-201ENST00000538077 C14orf177Q52M58 125 aa8.41□□□□□ -1.06
LINC00346-201ENST00000538077 IGHV1-58A0A0C4DH39 117 aa8.41□□□□□ -1.06
LINC00346-201ENST00000538077 TRBV10-1A0A0K0K1A3 114 aa8.41□□□□□ -1.06
LINC00346-201ENST00000538077 CTRLP40313 264 aa8.41□□□□□ -1.06
LINC00346-201ENST00000538077 MP68P56378 58 aa8.41□□□□□ -1.06
LINC00346-201ENST00000538077 A0A0B4J2C4 111 aa8.41□□□□□ -1.06
LINC00346-201ENST00000538077 ACYP1P07311 99 aa8.41□□□□□ -1.06
LINC00346-201ENST00000538077 NCOR1O75376 2440 aa8.41□□□□□ -1.06
LINC00346-201ENST00000538077 LINC00526Q96FQ7 95 aa8.41□□□□□ -1.06
LINC00346-201ENST00000538077 MED14OSP0DP75 135 aa8.4□□□□□ -1.06
LINC00346-201ENST00000538077 LINC01545Q5VT33 79 aa8.4□□□□□ -1.06
LINC00346-201ENST00000538077 SLPIP03973 132 aa8.4□□□□□ -1.06
LINC00346-201ENST00000538077 ZGRF1Q86YA3 2104 aa8.4□□□□□ -1.06
LINC00346-201ENST00000538077 BBC3Q96PG8 261 aaPredicted RBP8.4□□□□□ -1.06
LINC00346-201ENST00000538077 PPDPFQ9H3Y8 114 aa8.4□□□□□ -1.07
LINC00346-201ENST00000538077 J3KT08 172 aa8.4□□□□□ -1.07
LINC00346-201ENST00000538077 CADP27708 2225 aa8.39□□□□□ -1.07
LINC00346-201ENST00000538077 Q6ZS46 218 aa8.39□□□□□ -1.07
LINC00346-201ENST00000538077 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.39□□□□□ -1.07
LINC00346-201ENST00000538077 PKDREJQ9NTG1 2253 aa8.39□□□□□ -1.07
LINC00346-201ENST00000538077 LOC100131303A0A0U1RQF7 123 aa8.39□□□□□ -1.07
LINC00346-201ENST00000538077 LINC00322Q6ZN03 302 aaPredicted RBP8.39□□□□□ -1.07
LINC00346-201ENST00000538077 NEXN-AS1Q8NBZ9 246 aa8.39□□□□□ -1.07
LINC00346-201ENST00000538077 ZNF702PQ9H963 129 aa8.39□□□□□ -1.07
LINC00346-201ENST00000538077 LYRM9A8MSI8 78 aa8.39□□□□□ -1.07
LINC00346-201ENST00000538077 SCXQ7RTU7 201 aa8.39□□□□□ -1.07
LINC00346-201ENST00000538077 UBE2D1P51668 147 aa8.38□□□□□ -1.07
LINC00346-201ENST00000538077 NANOS2P60321 138 aaKnown RBP8.38□□□□□ -1.07
LINC00346-201ENST00000538077 C20orf203Q8NBC4 194 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms