RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 RPL39LQ96EH5 51 aaKnown RBP8.58□□□□□ -1.04
SEMA4D-221ENST00000537934 S4R3C0 116 aa8.58□□□□□ -1.04
SEMA4D-221ENST00000537934 IGHV1-3A0A0C4DH29 117 aa8.57□□□□□ -1.04
SEMA4D-221ENST00000537934 OR13C6PQ8NH95 151 aa8.57□□□□□ -1.04
SEMA4D-221ENST00000537934 BEX4Q9NWD9 120 aaPredicted RBP8.57□□□□□ -1.04
SEMA4D-221ENST00000537934 ATP5G1P05496 136 aa8.57□□□□□ -1.04
SEMA4D-221ENST00000537934 ACYP1P07311 99 aa8.57□□□□□ -1.04
SEMA4D-221ENST00000537934 ANKRD17O75179 2603 aaKnown RBP8.56□□□□□ -1.04
SEMA4D-221ENST00000537934 IGIPA6NJ69 53 aa8.56□□□□□ -1.04
SEMA4D-221ENST00000537934 M0R381 172 aa8.56□□□□□ -1.04
SEMA4D-221ENST00000537934 CEMP1Q6PRD7 247 aaPredicted RBP8.56□□□□□ -1.04
SEMA4D-221ENST00000537934 METTL26Q96S19 204 aa8.56□□□□□ -1.04
SEMA4D-221ENST00000537934 TMEM219Q86XT9 240 aa8.56□□□□□ -1.04
SEMA4D-221ENST00000537934 CCL19Q99731 98 aa8.56□□□□□ -1.04
SEMA4D-221ENST00000537934 RNF5Q99942 180 aa8.56□□□□□ -1.04
SEMA4D-221ENST00000537934 AGPAT4-IT1Q9H0P7 198 aa8.56□□□□□ -1.04
SEMA4D-221ENST00000537934 F8W735 103 aaPredicted RBP8.55□□□□□ -1.04
SEMA4D-221ENST00000537934 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
SEMA4D-221ENST00000537934 IGFBPL1Q8WX77 278 aa8.55□□□□□ -1.04
SEMA4D-221ENST00000537934 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
SEMA4D-221ENST00000537934 DPH3P1Q9H4G8 78 aa8.55□□□□□ -1.04
SEMA4D-221ENST00000537934 TMEM223A0PJW6 202 aa8.55□□□□□ -1.04
SEMA4D-221ENST00000537934 PPP1R17O96001 155 aa8.55□□□□□ -1.04
SEMA4D-221ENST00000537934 ZNRF2Q8NHG8 242 aa8.55□□□□□ -1.04
SEMA4D-221ENST00000537934 BPESC1Q9GZL8 116 aa8.55□□□□□ -1.04
SEMA4D-221ENST00000537934 NBPF19A0A087WUL8 3843 aa8.55□□□□□ -1.04
SEMA4D-221ENST00000537934 LEPROTO15243 131 aa8.54□□□□□ -1.04
SEMA4D-221ENST00000537934 COX6CP09669 75 aa8.54□□□□□ -1.04
SEMA4D-221ENST00000537934 ZNF876PQ49A33 203 aa8.54□□□□□ -1.04
SEMA4D-221ENST00000537934 RNF182Q8N6D2 247 aa8.54□□□□□ -1.04
SEMA4D-221ENST00000537934 TP53TG1Q9Y2A0 90 aa8.54□□□□□ -1.04
SEMA4D-221ENST00000537934 KLK5Q9Y337 293 aaPredicted RBP8.54□□□□□ -1.04
SEMA4D-221ENST00000537934 ICOSQ9Y6W8 199 aa8.54□□□□□ -1.04
SEMA4D-221ENST00000537934 IGLV1-47P01700 117 aa8.53□□□□□ -1.04
SEMA4D-221ENST00000537934 FANCD2OSQ96PS1 177 aa8.53□□□□□ -1.04
SEMA4D-221ENST00000537934 CITED2Q99967 270 aaPredicted RBP8.53□□□□□ -1.04
SEMA4D-221ENST00000537934 LINC00527Q9UJ94 153 aa8.53□□□□□ -1.04
SEMA4D-221ENST00000537934 ABCA2Q9BZC7 2435 aa8.53□□□□□ -1.04
SEMA4D-221ENST00000537934 APCP25054 2843 aa8.53□□□□□ -1.04
SEMA4D-221ENST00000537934 IGLV11-55A0A075B6I3 123 aa8.53□□□□□ -1.04
SEMA4D-221ENST00000537934 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
SEMA4D-221ENST00000537934 GCN1Q92616 2671 aaKnown RBP8.53□□□□□ -1.04
SEMA4D-221ENST00000537934 NAV2Q8IVL1 2488 aa8.53□□□□□ -1.04
SEMA4D-221ENST00000537934 A0A0J9YX75 114 aa8.52□□□□□ -1.04
SEMA4D-221ENST00000537934 BUB1B-PAK6H3BSN5 160 aa8.52□□□□□ -1.04
SEMA4D-221ENST00000537934 CRYGAP11844 174 aa8.52□□□□□ -1.04
SEMA4D-221ENST00000537934 COX7CP15954 63 aa8.52□□□□□ -1.04
SEMA4D-221ENST00000537934 ZFP36P26651 326 aaKnown RBP8.52□□□□□ -1.04
SEMA4D-221ENST00000537934 LINC00643Q86TS7 51 aa8.52□□□□□ -1.04
SEMA4D-221ENST00000537934 GPHB5Q86YW7 130 aa8.52□□□□□ -1.04
SEMA4D-221ENST00000537934 GAGE2AQ6NT46 116 aa8.52□□□□□ -1.05
SEMA4D-221ENST00000537934 EDA2RQ9HAV5 297 aa8.52□□□□□ -1.05
SEMA4D-221ENST00000537934 ZNF256Q9Y2P7 627 aaPredicted RBP8.52□□□□□ -1.05
SEMA4D-221ENST00000537934 SDHAF1A6NFY7 115 aa8.52□□□□□ -1.05
SEMA4D-221ENST00000537934 LST1O00453 97 aa8.52□□□□□ -1.05
SEMA4D-221ENST00000537934 COX7A1P24310 79 aa8.52□□□□□ -1.05
SEMA4D-221ENST00000537934 UBE2E1P51965 193 aa8.52□□□□□ -1.05
SEMA4D-221ENST00000537934 LY6G5BQ8NDX9 201 aa8.52□□□□□ -1.05
SEMA4D-221ENST00000537934 ZANQ9Y493 2812 aa8.51□□□□□ -1.05
SEMA4D-221ENST00000537934 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.51□□□□□ -1.05
SEMA4D-221ENST00000537934 MGPP08493 103 aa8.51□□□□□ -1.05
SEMA4D-221ENST00000537934 PLA2G2AP14555 144 aa8.51□□□□□ -1.05
SEMA4D-221ENST00000537934 CUBNO60494 3623 aa8.5□□□□□ -1.05
SEMA4D-221ENST00000537934 CTSGP08311 255 aa8.5□□□□□ -1.05
SEMA4D-221ENST00000537934 CXCL5P42830 114 aa8.5□□□□□ -1.05
SEMA4D-221ENST00000537934 KRTAP10-9P60411 292 aa8.5□□□□□ -1.05
SEMA4D-221ENST00000537934 C9orf47Q6ZRZ4 202 aa8.5□□□□□ -1.05
SEMA4D-221ENST00000537934 LMO4P61968 165 aa8.5□□□□□ -1.05
SEMA4D-221ENST00000537934 C2orf48Q96LS8 159 aa8.5□□□□□ -1.05
SEMA4D-221ENST00000537934 IGHV3-23P01764 117 aa8.49□□□□□ -1.05
SEMA4D-221ENST00000537934 RPL39P62891 51 aaKnown RBP8.49□□□□□ -1.05
SEMA4D-221ENST00000537934 C5orf38Q86SI9 138 aa8.49□□□□□ -1.05
SEMA4D-221ENST00000537934 SMCR5Q8TEV8 140 aa8.49□□□□□ -1.05
SEMA4D-221ENST00000537934 CLEC2BQ92478 149 aa8.49□□□□□ -1.05
SEMA4D-221ENST00000537934 MRPL53Q96EL3 112 aaKnown RBP8.49□□□□□ -1.05
SEMA4D-221ENST00000537934 A0A0J9YXY3 114 aa8.49□□□□□ -1.05
SEMA4D-221ENST00000537934 SDIM1Q6ZPB5 146 aa8.49□□□□□ -1.05
SEMA4D-221ENST00000537934 NBR2O15453 112 aa8.48□□□□□ -1.05
SEMA4D-221ENST00000537934 BUB3O43684 328 aa8.48□□□□□ -1.05
SEMA4D-221ENST00000537934 HIST2H2BCQ6DN03 193 aa8.48□□□□□ -1.05
SEMA4D-221ENST00000537934 IGHV4-61A0A0C4DH41 118 aa8.48□□□□□ -1.05
SEMA4D-221ENST00000537934 J3QKU1 62 aa8.48□□□□□ -1.05
SEMA4D-221ENST00000537934 POLR2KP53803 58 aaKnown RBP8.48□□□□□ -1.05
SEMA4D-221ENST00000537934 ZFAND3Q9H8U3 227 aa8.48□□□□□ -1.05
SEMA4D-221ENST00000537934 PHLDA3Q9Y5J5 127 aa8.48□□□□□ -1.05
SEMA4D-221ENST00000537934 FASNP49327 2511 aaKnown RBP8.48□□□□□ -1.05
SEMA4D-221ENST00000537934 IGHV4OR15-8A0A075B7B6 117 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 IGHV3OR16-8A0A075B7F1 116 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 IGHV4-30-2A0A087WSY4 118 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 A0A087WW49 117 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 S100A4P26447 101 aaKnown RBP8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 C10orf105Q8TEF2 133 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 VCYO14598 125 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 OVOL1O14753 267 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 SPRY2O43597 315 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 PRR9Q5T870 116 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 DCANP1Q8TF63 244 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 LITAFQ99732 161 aa8.47□□□□□ -1.05
SEMA4D-221ENST00000537934 LY6LH3BQJ8 138 aa8.46□□□□□ -1.05
SEMA4D-221ENST00000537934 I3L3M4 83 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms