RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 TTTY13Q9BZ97 58 aa11.44□□□□□ -0.58
MKS1-204ENST00000537529 I3L3M4 83 aa11.44□□□□□ -0.58
MKS1-204ENST00000537529 RPL39P62891 51 aaKnown RBP11.44□□□□□ -0.58
MKS1-204ENST00000537529 PMVKQ15126 192 aa11.44□□□□□ -0.58
MKS1-204ENST00000537529 DEFB104AQ8WTQ1 72 aa11.44□□□□□ -0.58
MKS1-204ENST00000537529 CHAC1Q9BUX1 264 aa11.44□□□□□ -0.58
MKS1-204ENST00000537529 FLNAP21333 2647 aaKnown RBP11.43□□□□□ -0.58
MKS1-204ENST00000537529 TRBV25-1A0A075B6N4 114 aa11.43□□□□□ -0.58
MKS1-204ENST00000537529 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
MKS1-204ENST00000537529 TSHBP01222 138 aa11.43□□□□□ -0.58
MKS1-204ENST00000537529 CMC4P56277 68 aaPredicted RBP11.43□□□□□ -0.58
MKS1-204ENST00000537529 PAPPA-AS1Q5QFB9 102 aa11.43□□□□□ -0.58
MKS1-204ENST00000537529 PDZD2O15018 2839 aa11.43□□□□□ -0.58
MKS1-204ENST00000537529 C11orf72Q8NBR9 251 aa11.42□□□□□ -0.58
MKS1-204ENST00000537529 OR11H2Q8NH07 326 aa11.42□□□□□ -0.58
MKS1-204ENST00000537529 CHD6Q8TD26 2715 aa11.42□□□□□ -0.58
MKS1-204ENST00000537529 RHODO00212 210 aa11.42□□□□□ -0.58
MKS1-204ENST00000537529 PRM2P04554 102 aa11.42□□□□□ -0.58
MKS1-204ENST00000537529 UBE2V1Q13404 147 aa11.42□□□□□ -0.58
MKS1-204ENST00000537529 VAMP3Q15836 100 aa11.42□□□□□ -0.58
MKS1-204ENST00000537529 UFSP1Q6NVU6 142 aa11.42□□□□□ -0.58
MKS1-204ENST00000537529 IGHV3-73A0A0B4J1V6 119 aa11.41□□□□□ -0.58
MKS1-204ENST00000537529 SAP30O75446 220 aa11.41□□□□□ -0.58
MKS1-204ENST00000537529 PTTG1IPP53801 180 aa11.41□□□□□ -0.58
MKS1-204ENST00000537529 CST9LQ9H4G1 147 aa11.41□□□□□ -0.58
MKS1-204ENST00000537529 XCL2Q9UBD3 114 aa11.41□□□□□ -0.58
MKS1-204ENST00000537529 MYO9AB2RTY4 2548 aa11.41□□□□□ -0.58
MKS1-204ENST00000537529 TLN2Q9Y4G6 2542 aa11.41□□□□□ -0.58
MKS1-204ENST00000537529 CCDC168Q8NDH2 2452 aa11.4□□□□□ -0.58
MKS1-204ENST00000537529 MAPKAPK5-AS1Q8N8E1 139 aa11.4□□□□□ -0.58
MKS1-204ENST00000537529 E9PLD3 99 aa11.4□□□□□ -0.58
MKS1-204ENST00000537529 H3BRM9 83 aa11.4□□□□□ -0.58
MKS1-204ENST00000537529 CFAP126Q5VTH2 177 aa11.4□□□□□ -0.58
MKS1-204ENST00000537529 SONP18583 2426 aaKnown RBP11.4□□□□□ -0.58
MKS1-204ENST00000537529 IGLV4-69A0A075B6H9 119 aa11.39□□□□□ -0.59
MKS1-204ENST00000537529 BEAN1Q3B7T3 259 aa11.39□□□□□ -0.59
MKS1-204ENST00000537529 C20orf203Q8NBC4 194 aa11.39□□□□□ -0.59
MKS1-204ENST00000537529 TNFRSF18Q9Y5U5 241 aa11.39□□□□□ -0.59
MKS1-204ENST00000537529 CCL25O15444 150 aa11.39□□□□□ -0.59
MKS1-204ENST00000537529 GCSHP23434 173 aa11.39□□□□□ -0.59
MKS1-204ENST00000537529 HERVK_113P61574 105 aa11.39□□□□□ -0.59
MKS1-204ENST00000537529 MRPL16Q9NX20 251 aaKnown RBP11.39□□□□□ -0.59
MKS1-204ENST00000537529 MYMXA0A1B0GTQ4 84 aa11.38□□□□□ -0.59
MKS1-204ENST00000537529 C11orf86A6NJI1 115 aa11.38□□□□□ -0.59
MKS1-204ENST00000537529 P0DMU3 169 aa11.38□□□□□ -0.59
MKS1-204ENST00000537529 FAM231AP0DMU4 169 aa11.38□□□□□ -0.59
MKS1-204ENST00000537529 FAM231CP0DMU5 169 aa11.38□□□□□ -0.59
MKS1-204ENST00000537529 PROK1P58294 105 aa11.38□□□□□ -0.59
MKS1-204ENST00000537529 PRADC1Q9BSG0 188 aa11.38□□□□□ -0.59
MKS1-204ENST00000537529 SORL1Q92673 2214 aa11.38□□□□□ -0.59
MKS1-204ENST00000537529 ADARB2-AS1A8MUL3 147 aa11.37□□□□□ -0.59
MKS1-204ENST00000537529 RS1O15537 224 aa11.37□□□□□ -0.59
MKS1-204ENST00000537529 TAL2Q16559 108 aa11.37□□□□□ -0.59
MKS1-204ENST00000537529 C1orf158Q8N1D5 194 aa11.37□□□□□ -0.59
MKS1-204ENST00000537529 SMR3AQ99954 134 aa11.37□□□□□ -0.59
MKS1-204ENST00000537529 IGLV1-51P01701 117 aa11.37□□□□□ -0.59
MKS1-204ENST00000537529 IGHV3OR16-12A0A075B7B8 117 aa11.36□□□□□ -0.59
MKS1-204ENST00000537529 FAM110AQ9BQ89 295 aa11.36□□□□□ -0.59
MKS1-204ENST00000537529 C9orf118A6NHY6 69 aa11.36□□□□□ -0.59
MKS1-204ENST00000537529 IGHV3-53P01767 116 aa11.36□□□□□ -0.59
MKS1-204ENST00000537529 CEND1Q8N111 149 aa11.36□□□□□ -0.59
MKS1-204ENST00000537529 DNAJC30Q96LL9 226 aa11.36□□□□□ -0.59
MKS1-204ENST00000537529 LY6G6DO95868 133 aa11.35□□□□□ -0.59
MKS1-204ENST00000537529 AZU1P20160 251 aa11.35□□□□□ -0.59
MKS1-204ENST00000537529 FXYD2P54710 66 aa11.35□□□□□ -0.59
MKS1-204ENST00000537529 EMP1P54849 157 aa11.35□□□□□ -0.59
MKS1-204ENST00000537529 IL17DQ8TAD2 202 aa11.35□□□□□ -0.59
MKS1-204ENST00000537529 TM2D2Q9BX73 214 aa11.35□□□□□ -0.59
MKS1-204ENST00000537529 ZNF469Q96JG9 3925 aaPredicted RBP11.34□□□□□ -0.59
MKS1-204ENST00000537529 AMMECR1LQ6DCA0 310 aa11.34□□□□□ -0.59
MKS1-204ENST00000537529 Q6ZSN1 163 aa11.34□□□□□ -0.59
MKS1-204ENST00000537529 SMIM13P0DJ93 91 aa11.34□□□□□ -0.59
MKS1-204ENST00000537529 OR4C5Q8NGB2 326 aa11.34□□□□□ -0.59
MKS1-204ENST00000537529 ZNF815PA8K554 130 aa11.33□□□□□ -0.6
MKS1-204ENST00000537529 NFE4Q86UQ8 179 aa11.33□□□□□ -0.6
MKS1-204ENST00000537529 NDUFA11Q86Y39 141 aa11.33□□□□□ -0.6
MKS1-204ENST00000537529 RNASE8Q8TDE3 154 aaKnown RBP11.33□□□□□ -0.6
MKS1-204ENST00000537529 HIST1H4GQ99525 98 aa11.33□□□□□ -0.6
MKS1-204ENST00000537529 PYGO1Q9Y3Y4 419 aa11.33□□□□□ -0.6
MKS1-204ENST00000537529 IGLV4-3A0A075B6K6 122 aa11.32□□□□□ -0.6
MKS1-204ENST00000537529 NBPF19A0A087WUL8 3843 aa11.32□□□□□ -0.6
MKS1-204ENST00000537529 TMEM170BQ5T4T1 132 aa11.32□□□□□ -0.6
MKS1-204ENST00000537529 TMEM263Q8WUH6 116 aaKnown RBP11.32□□□□□ -0.6
MKS1-204ENST00000537529 OPRPNQ99935 248 aaPredicted RBP11.32□□□□□ -0.6
MKS1-204ENST00000537529 TRGV1A0A0A0MS02 117 aa11.32□□□□□ -0.6
MKS1-204ENST00000537529 ZNRF2Q8NHG8 242 aa11.32□□□□□ -0.6
MKS1-204ENST00000537529 VCX2Q9H322 139 aa11.32□□□□□ -0.6
MKS1-204ENST00000537529 UNC79Q9P2D8 2635 aa11.31□□□□□ -0.6
MKS1-204ENST00000537529 H3BUT2 72 aa11.31□□□□□ -0.6
MKS1-204ENST00000537529 RAB37Q96AX2 223 aa11.31□□□□□ -0.6
MKS1-204ENST00000537529 K7EP13 123 aa11.31□□□□□ -0.6
MKS1-204ENST00000537529 C19orf73Q9NVV2 129 aa11.31□□□□□ -0.6
MKS1-204ENST00000537529 TRBV7-3A0A075B6L6 115 aa11.3□□□□□ -0.6
MKS1-204ENST00000537529 CRYBA4P53673 196 aa11.3□□□□□ -0.6
MKS1-204ENST00000537529 C1QTNF4Q9BXJ3 329 aa11.3□□□□□ -0.6
MKS1-204ENST00000537529 SCGB1D4Q6XE38 83 aa11.29□□□□□ -0.6
MKS1-204ENST00000537529 WFDC10AQ9H1F0 79 aa11.29□□□□□ -0.6
MKS1-204ENST00000537529 SPANXA1Q9NS26 97 aa11.29□□□□□ -0.6
MKS1-204ENST00000537529 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
MKS1-204ENST00000537529 Q9UF83 564 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms