RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 CFAP54Q96N23 3096 aa7.59□□□□□ -1.2
RFX4-204ENST00000536688 LINC00315P59091 139 aa7.59□□□□□ -1.2
RFX4-204ENST00000536688 MRPS36P82909 103 aaKnown RBP7.59□□□□□ -1.2
RFX4-204ENST00000536688 COPS9Q8WXC6 57 aa7.59□□□□□ -1.2
RFX4-204ENST00000536688 ARRDC1-AS1Q9H2J1 176 aa7.59□□□□□ -1.2
RFX4-204ENST00000536688 TPRP12270 2363 aaKnown RBP7.58□□□□□ -1.2
RFX4-204ENST00000536688 MALRD1Q5VYJ5 2156 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 ACACBO00763 2458 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 GVINP1Q7Z2Y8 2422 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 USP17L23D6RBM5 183 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 CTSGP08311 255 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 BAALC-AS2P0C853 105 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 S100A4P26447 101 aaKnown RBP7.58□□□□□ -1.2
RFX4-204ENST00000536688 LOXP28300 417 aaPredicted RBP7.58□□□□□ -1.2
RFX4-204ENST00000536688 SEC61GP60059 68 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 LINC00336Q6ZUF6 198 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 TMEM86BQ8N661 226 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 C1orf43Q9BWL3 253 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 KAAG1Q9UBP8 84 aa7.58□□□□□ -1.2
RFX4-204ENST00000536688 BUB1B-PAK6H3BSN5 160 aa7.57□□□□□ -1.2
RFX4-204ENST00000536688 RNASE4P34096 147 aaKnown RBP7.57□□□□□ -1.2
RFX4-204ENST00000536688 ADAMTSL4-AS1Q5T5F5 129 aa7.57□□□□□ -1.2
RFX4-204ENST00000536688 NPBQ8NG41 125 aa7.57□□□□□ -1.2
RFX4-204ENST00000536688 IGHV1-58A0A0C4DH39 117 aa7.57□□□□□ -1.2
RFX4-204ENST00000536688 NBR2O15453 112 aa7.57□□□□□ -1.2
RFX4-204ENST00000536688 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
RFX4-204ENST00000536688 C22orf24Q9Y442 160 aa7.56□□□□□ -1.2
RFX4-204ENST00000536688 PRRC2AP48634 2157 aaKnown RBP7.56□□□□□ -1.2
RFX4-204ENST00000536688 KLRB1Q12918 225 aa7.56□□□□□ -1.2
RFX4-204ENST00000536688 V9GYY9 64 aa7.56□□□□□ -1.2
RFX4-204ENST00000536688 ZNF292O60281 2723 aa7.55□□□□□ -1.2
RFX4-204ENST00000536688 DMXL1Q9Y485 3027 aa7.55□□□□□ -1.2
RFX4-204ENST00000536688 M0R1B8 84 aa7.55□□□□□ -1.2
RFX4-204ENST00000536688 BCE1O60756 84 aa7.55□□□□□ -1.2
RFX4-204ENST00000536688 APRG1Q8IVJ8 170 aa7.55□□□□□ -1.2
RFX4-204ENST00000536688 C10orf105Q8TEF2 133 aa7.55□□□□□ -1.2
RFX4-204ENST00000536688 OVOL2Q9BRP0 275 aa7.55□□□□□ -1.2
RFX4-204ENST00000536688 NBEAQ8NFP9 2946 aa7.55□□□□□ -1.2
RFX4-204ENST00000536688 FAM236DA0A1B0GTK5 79 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 TMEM178BH3BS89 294 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 FAM236CP0DP71 79 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 KLK9Q2XQG4 91 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 LINC01561Q8N1V8 128 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 C9orf106Q8NAJ2 232 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 VSIG2Q96IQ7 327 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 KLK9Q9UKQ9 250 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 A0A0J9YXV3 536 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 M0R1W7 72 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 DNAL4O96015 105 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 RPL35AP18077 110 aaKnown RBP7.54□□□□□ -1.2
RFX4-204ENST00000536688 FHL2Q14192 279 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 PRR9Q5T870 116 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 SUMO4Q6EEV6 95 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 ZFAND2AQ8N6M9 145 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 C20orf203Q8NBC4 194 aa7.54□□□□□ -1.2
RFX4-204ENST00000536688 IGLV4-3A0A075B6K6 122 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 SMIM26A0A096LP01 95 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 IGHG2P01859 326 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 RNASE3P12724 160 aaKnown RBP7.53□□□□□ -1.2
RFX4-204ENST00000536688 PLA2G2CQ5R387 149 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 ATP5EP2Q5VTU8 51 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 NUP37Q8NFH4 326 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 OBSCN-AS1Q96MR7 158 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 UBE2D4Q9Y2X8 147 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 FLNBO75369 2602 aaKnown RBP7.53□□□□□ -1.2
RFX4-204ENST00000536688 COL27A1Q8IZC6 1860 aaPredicted RBP7.53□□□□□ -1.2
RFX4-204ENST00000536688 CEP250Q9BV73 2442 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 WDFY3Q8IZQ1 3526 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 C9orf139Q6ZV77 190 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 MBD3L2Q8NHZ7 208 aaPredicted RBP7.53□□□□□ -1.2
RFX4-204ENST00000536688 S4R3C0 116 aa7.53□□□□□ -1.2
RFX4-204ENST00000536688 ASH1LQ9NR48 2969 aaKnown RBP7.52□□□□□ -1.21
RFX4-204ENST00000536688 IGHV3-64A0A075B6Q5 118 aa7.52□□□□□ -1.21
RFX4-204ENST00000536688 CIRBPQ14011 172 aaKnown RBP7.52□□□□□ -1.21
RFX4-204ENST00000536688 Q6ZSV7 163 aa7.52□□□□□ -1.21
RFX4-204ENST00000536688 TMEM243Q9BU79 118 aa7.52□□□□□ -1.21
RFX4-204ENST00000536688 DCHS1Q96JQ0 3298 aa7.52□□□□□ -1.21
RFX4-204ENST00000536688 NCOR2Q9Y618 2525 aa7.52□□□□□ -1.21
RFX4-204ENST00000536688 S100A7L2Q5SY68 101 aa7.52□□□□□ -1.21
RFX4-204ENST00000536688 ITLN2Q8WWU7 325 aaPredicted RBP7.52□□□□□ -1.21
RFX4-204ENST00000536688 NDUFA1O15239 70 aa7.51□□□□□ -1.21
RFX4-204ENST00000536688 LY6G5BQ8NDX9 201 aa7.51□□□□□ -1.21
RFX4-204ENST00000536688 C16orf95Q9H693 158 aa7.51□□□□□ -1.21
RFX4-204ENST00000536688 U3KQE9 123 aa7.51□□□□□ -1.21
RFX4-204ENST00000536688 MAP1BP46821 2468 aaKnown RBP7.51□□□□□ -1.21
RFX4-204ENST00000536688 USP24Q9UPU5 2620 aa7.51□□□□□ -1.21
RFX4-204ENST00000536688 CLPSL1A2RUU4 121 aa7.5□□□□□ -1.21
RFX4-204ENST00000536688 LYPD2Q6UXB3 125 aa7.5□□□□□ -1.21
RFX4-204ENST00000536688 VMO1Q7Z5L0 202 aa7.5□□□□□ -1.21
RFX4-204ENST00000536688 FRYQ5TBA9 3013 aa7.5□□□□□ -1.21
RFX4-204ENST00000536688 NACAE9PAV3 2078 aa7.5□□□□□ -1.21
RFX4-204ENST00000536688 ZFHX4Q86UP3 3567 aa7.5□□□□□ -1.21
RFX4-204ENST00000536688 ADARB2-AS1A8MUL3 147 aa7.5□□□□□ -1.21
RFX4-204ENST00000536688 PF4P02776 101 aa7.5□□□□□ -1.21
RFX4-204ENST00000536688 ZNF580Q9UK33 172 aa7.5□□□□□ -1.21
RFX4-204ENST00000536688 MED13Q9UHV7 2174 aa7.49□□□□□ -1.21
RFX4-204ENST00000536688 TRBV10-3A0A0K0K1G6 114 aa7.49□□□□□ -1.21
RFX4-204ENST00000536688 RBMY1BA6NDE4 496 aaKnown RBP7.49□□□□□ -1.21
RFX4-204ENST00000536688 RBMY1EA6NEQ0 496 aaKnown RBP7.49□□□□□ -1.21
RFX4-204ENST00000536688 RBMY1DP0C7P1 496 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms