RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 IFNA1P01562 189 aa9.43□□□□□ -0.9
RTN3P1-201ENST00000536295 GNG4P50150 75 aa9.43□□□□□ -0.9
RTN3P1-201ENST00000536295 MEF2BQ02080 365 aaPredicted RBP9.43□□□□□ -0.9
RTN3P1-201ENST00000536295 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.43□□□□□ -0.9
RTN3P1-201ENST00000536295 FER1L6-AS1Q8NA97 138 aa9.43□□□□□ -0.9
RTN3P1-201ENST00000536295 CHCHD7Q9BUK0 85 aa9.43□□□□□ -0.9
RTN3P1-201ENST00000536295 MED9Q9NWA0 146 aa9.43□□□□□ -0.9
RTN3P1-201ENST00000536295 VPS13BQ7Z7G8 4022 aa9.42□□□□□ -0.9
RTN3P1-201ENST00000536295 PDE6DO43924 150 aa9.42□□□□□ -0.9
RTN3P1-201ENST00000536295 MGPP08493 103 aa9.42□□□□□ -0.9
RTN3P1-201ENST00000536295 C15orf54Q8N8G6 183 aa9.42□□□□□ -0.9
RTN3P1-201ENST00000536295 CHCHD5Q9BSY4 110 aa9.42□□□□□ -0.9
RTN3P1-201ENST00000536295 KIF25-AS1Q9Y6Z4 181 aa9.42□□□□□ -0.9
RTN3P1-201ENST00000536295 DNAH8Q96JB1 4490 aa9.42□□□□□ -0.9
RTN3P1-201ENST00000536295 C19orf71A6NCJ1 209 aa9.41□□□□□ -0.9
RTN3P1-201ENST00000536295 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
RTN3P1-201ENST00000536295 BCL2P10415 239 aa9.41□□□□□ -0.9
RTN3P1-201ENST00000536295 RPS20P60866 119 aaKnown RBP9.41□□□□□ -0.9
RTN3P1-201ENST00000536295 LINC01620Q4KN68 170 aa9.41□□□□□ -0.9
RTN3P1-201ENST00000536295 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
RTN3P1-201ENST00000536295 SLC51BQ86UW2 128 aa9.41□□□□□ -0.9
RTN3P1-201ENST00000536295 TRBV20OR9-2A0A075B6H5 130 aa9.4□□□□□ -0.9
RTN3P1-201ENST00000536295 P01737 135 aa9.4□□□□□ -0.9
RTN3P1-201ENST00000536295 CRPP02741 224 aa9.4□□□□□ -0.9
RTN3P1-201ENST00000536295 C1QBP02746 253 aa9.4□□□□□ -0.9
RTN3P1-201ENST00000536295 ANGP03950 147 aaKnown RBP9.4□□□□□ -0.9
RTN3P1-201ENST00000536295 IGLC6P0CF74 106 aa9.4□□□□□ -0.9
RTN3P1-201ENST00000536295 Q0VG73 95 aa9.4□□□□□ -0.9
RTN3P1-201ENST00000536295 Q8N976 141 aa9.4□□□□□ -0.9
RTN3P1-201ENST00000536295 ENHOQ6UWT2 76 aa9.39□□□□□ -0.91
RTN3P1-201ENST00000536295 NTM-AS1Q6ZSK4 140 aa9.39□□□□□ -0.91
RTN3P1-201ENST00000536295 SMIM12Q96EX1 92 aa9.39□□□□□ -0.91
RTN3P1-201ENST00000536295 C1orf43Q9BWL3 253 aa9.39□□□□□ -0.91
RTN3P1-201ENST00000536295 VAX2Q9UIW0 290 aa9.39□□□□□ -0.91
RTN3P1-201ENST00000536295 hCG_2014768A0A024R1R8 64 aa9.38□□□□□ -0.91
RTN3P1-201ENST00000536295 XKRY2A2RUG3 117 aa9.38□□□□□ -0.91
RTN3P1-201ENST00000536295 CACNG7P62955 275 aa9.38□□□□□ -0.91
RTN3P1-201ENST00000536295 GAGE6Q13070 117 aa9.38□□□□□ -0.91
RTN3P1-201ENST00000536295 TMEM97Q5BJF2 176 aa9.38□□□□□ -0.91
RTN3P1-201ENST00000536295 SUMO4Q6EEV6 95 aa9.38□□□□□ -0.91
RTN3P1-201ENST00000536295 ATRAIDQ6UW56 229 aa9.38□□□□□ -0.91
RTN3P1-201ENST00000536295 LYZL1Q6UWQ5 148 aa9.38□□□□□ -0.91
RTN3P1-201ENST00000536295 M0QY20 66 aa9.37□□□□□ -0.91
RTN3P1-201ENST00000536295 PKIAP61925 76 aa9.37□□□□□ -0.91
RTN3P1-201ENST00000536295 CLPSL2Q6UWE3 100 aa9.37□□□□□ -0.91
RTN3P1-201ENST00000536295 Q6ZNX1 250 aa9.37□□□□□ -0.91
RTN3P1-201ENST00000536295 BIN3Q9NQY0 253 aa9.37□□□□□ -0.91
RTN3P1-201ENST00000536295 TRBV25-1A0A075B6N4 114 aa9.36□□□□□ -0.91
RTN3P1-201ENST00000536295 F2Z2F3 143 aa9.36□□□□□ -0.91
RTN3P1-201ENST00000536295 H7C1H1 209 aa9.36□□□□□ -0.91
RTN3P1-201ENST00000536295 HLA-DQA1P01909 254 aa9.36□□□□□ -0.91
RTN3P1-201ENST00000536295 NKX2-5P52952 324 aaPredicted RBP9.36□□□□□ -0.91
RTN3P1-201ENST00000536295 Q6ZSA8 131 aa9.36□□□□□ -0.91
RTN3P1-201ENST00000536295 AKAP14Q86UN6 197 aa9.36□□□□□ -0.91
RTN3P1-201ENST00000536295 NUDT10Q8NFP7 164 aa9.36□□□□□ -0.91
RTN3P1-201ENST00000536295 NUDT11Q96G61 164 aa9.36□□□□□ -0.91
RTN3P1-201ENST00000536295 IGHV1-24A0A0C4DH33 117 aa9.35□□□□□ -0.91
RTN3P1-201ENST00000536295 TRGC1P0CF51 173 aa9.35□□□□□ -0.91
RTN3P1-201ENST00000536295 NTF3P20783 257 aa9.35□□□□□ -0.91
RTN3P1-201ENST00000536295 RBX1P62877 108 aa9.35□□□□□ -0.91
RTN3P1-201ENST00000536295 C9orf62Q8N4C0 152 aa9.35□□□□□ -0.91
RTN3P1-201ENST00000536295 DEFB104AQ8WTQ1 72 aa9.35□□□□□ -0.91
RTN3P1-201ENST00000536295 RNASE7Q9H1E1 156 aaKnown RBP9.35□□□□□ -0.91
RTN3P1-201ENST00000536295 TAGLN2P37802 199 aaKnown RBP9.34□□□□□ -0.91
RTN3P1-201ENST00000536295 RASL11AQ6T310 242 aa9.34□□□□□ -0.91
RTN3P1-201ENST00000536295 ALKAL2Q6UX46 152 aa9.34□□□□□ -0.91
RTN3P1-201ENST00000536295 LINC00269Q8N2A0 174 aa9.34□□□□□ -0.91
RTN3P1-201ENST00000536295 DPH3P1Q9H4G8 78 aa9.34□□□□□ -0.91
RTN3P1-201ENST00000536295 HERC1Q15751 4861 aa9.33□□□□□ -0.92
RTN3P1-201ENST00000536295 USP17L23D6RBM5 183 aa9.33□□□□□ -0.92
RTN3P1-201ENST00000536295 K7EN84 100 aa9.33□□□□□ -0.92
RTN3P1-201ENST00000536295 TWIST1Q15672 202 aa9.33□□□□□ -0.92
RTN3P1-201ENST00000536295 MIAQ16674 131 aa9.33□□□□□ -0.92
RTN3P1-201ENST00000536295 IQCJQ1A5X6 159 aa9.33□□□□□ -0.92
RTN3P1-201ENST00000536295 C14orf177Q52M58 125 aa9.33□□□□□ -0.92
RTN3P1-201ENST00000536295 LINC00528Q8N1L1 170 aa9.33□□□□□ -0.92
RTN3P1-201ENST00000536295 OCC1Q8TAD7 63 aa9.33□□□□□ -0.92
RTN3P1-201ENST00000536295 RPP21Q9H633 154 aaKnown RBP9.33□□□□□ -0.92
RTN3P1-201ENST00000536295 CTRLP40313 264 aa9.32□□□□□ -0.92
RTN3P1-201ENST00000536295 SCXQ7RTU7 201 aa9.32□□□□□ -0.92
RTN3P1-201ENST00000536295 PRR34Q9NV39 138 aa9.32□□□□□ -0.92
RTN3P1-201ENST00000536295 SRRM2Q9UQ35 2752 aaKnown RBP9.31□□□□□ -0.92
RTN3P1-201ENST00000536295 CEBPGP53567 150 aa9.31□□□□□ -0.92
RTN3P1-201ENST00000536295 BLOC1S1P78537 153 aa9.31□□□□□ -0.92
RTN3P1-201ENST00000536295 TMEM243Q9BU79 118 aa9.31□□□□□ -0.92
RTN3P1-201ENST00000536295 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
RTN3P1-201ENST00000536295 MYCBP2O75592 4640 aa9.3□□□□□ -0.92
RTN3P1-201ENST00000536295 IGLV10-54A0A075B6I4 117 aa9.3□□□□□ -0.92
RTN3P1-201ENST00000536295 TRAV26-2A0A0B4J265 109 aa9.3□□□□□ -0.92
RTN3P1-201ENST00000536295 PLA2G1BP04054 148 aaKnown RBP9.3□□□□□ -0.92
RTN3P1-201ENST00000536295 REG3AQ06141 175 aa9.3□□□□□ -0.92
RTN3P1-201ENST00000536295 WDR73Q6P4I2 378 aa9.3□□□□□ -0.92
RTN3P1-201ENST00000536295 PRSS1P07477 247 aa9.29□□□□□ -0.92
RTN3P1-201ENST00000536295 C20orf203Q8NBC4 194 aa9.29□□□□□ -0.92
RTN3P1-201ENST00000536295 GTSF1Q8WW33 167 aa9.29□□□□□ -0.92
RTN3P1-201ENST00000536295 CHAC1Q9BUX1 264 aa9.29□□□□□ -0.92
RTN3P1-201ENST00000536295 FLG2Q5D862 2391 aaPredicted RBP9.29□□□□□ -0.92
RTN3P1-201ENST00000536295 IGLV4-60A0A075B6I1 120 aa9.28□□□□□ -0.92
RTN3P1-201ENST00000536295 TMEM250H0YL14 139 aa9.28□□□□□ -0.92
RTN3P1-201ENST00000536295 UBE2L6O14933 153 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 1304.3 ms